RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 HIRIP3Q9BW71 556 aaPredicted RBP12.35□□□□□ -0.43
GPNMB-202ENST00000381990 AFAP1Q8N556 730 aa12.34□□□□□ -0.43
GPNMB-202ENST00000381990 INO80Q9ULG1 1556 aaPredicted RBP12.33□□□□□ -0.44
GPNMB-202ENST00000381990 SCAPERQ9BY12 1400 aa12.33□□□□□ -0.44
GPNMB-202ENST00000381990 NBPF8Q3BBV2 869 aa12.33□□□□□ -0.44
GPNMB-202ENST00000381990 ATP7AQ04656 1500 aa12.32□□□□□ -0.44
GPNMB-202ENST00000381990 CFAP74Q9C0B2 1584 aa12.32□□□□□ -0.44
GPNMB-202ENST00000381990 EIF4G2P78344 907 aaKnown RBP eCLIP12.32□□□□□ -0.44
GPNMB-202ENST00000381990 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.31□□□□□ -0.44
GPNMB-202ENST00000381990 CD109Q6YHK3 1445 aa12.31□□□□□ -0.44
GPNMB-202ENST00000381990 HSPA5P11021 654 aaKnown RBP12.31□□□□□ -0.44
GPNMB-202ENST00000381990 PHF23Q9BUL5 403 aaPredicted RBP12.31□□□□□ -0.44
GPNMB-202ENST00000381990 MYT1LQ9UL68 1186 aa12.3□□□□□ -0.44
GPNMB-202ENST00000381990 ZNF518AQ6AHZ1 1483 aa12.28□□□□□ -0.44
GPNMB-202ENST00000381990 CCDC144AA2RUR9 1427 aa12.28□□□□□ -0.44
GPNMB-202ENST00000381990 UHRF1BP1Q6BDS2 1440 aa12.28□□□□□ -0.44
GPNMB-202ENST00000381990 DEPDC5O75140 1603 aa12.28□□□□□ -0.44
GPNMB-202ENST00000381990 ATP10AO60312 1499 aa12.28□□□□□ -0.44
GPNMB-202ENST00000381990 PLA2R1Q13018 1463 aa12.27□□□□□ -0.44
GPNMB-202ENST00000381990 RIMBP3CA6NJZ7 1639 aa12.27□□□□□ -0.45
GPNMB-202ENST00000381990 RIMBP3BA6NNM3 1639 aa12.27□□□□□ -0.45
GPNMB-202ENST00000381990 RIMBP3Q9UFD9 1639 aa12.27□□□□□ -0.45
GPNMB-202ENST00000381990 EIF2AK4Q9P2K8 1649 aaKnown RBP12.26□□□□□ -0.45
GPNMB-202ENST00000381990 KIDINS220Q9ULH0 1771 aa12.26□□□□□ -0.45
GPNMB-202ENST00000381990 SPATA31E1Q6ZUB1 1445 aa12.25□□□□□ -0.45
GPNMB-202ENST00000381990 MSH5O43196 834 aa12.25□□□□□ -0.45
GPNMB-202ENST00000381990 DHX29Q7Z478 1369 aaKnown RBP12.25□□□□□ -0.45
GPNMB-202ENST00000381990 CYB5RLQ6IPT4 315 aa12.25□□□□□ -0.45
GPNMB-202ENST00000381990 NEO1Q92859 1461 aa12.25□□□□□ -0.45
GPNMB-202ENST00000381990 POGZQ7Z3K3 1410 aa12.25□□□□□ -0.45
GPNMB-202ENST00000381990 KDM5CP41229 1560 aa12.24□□□□□ -0.45
GPNMB-202ENST00000381990 HNRNPUQ00839 825 aaKnown RBP eCLIP12.24□□□□□ -0.45
GPNMB-202ENST00000381990 RALGAPBQ86X10 1494 aa12.24□□□□□ -0.45
GPNMB-202ENST00000381990 WASHC2AQ641Q2 1341 aa12.23□□□□□ -0.45
GPNMB-202ENST00000381990 KANK1Q14678 1352 aa12.23□□□□□ -0.45
GPNMB-202ENST00000381990 ERICH6Q7L0X2 663 aa12.23□□□□□ -0.45
GPNMB-202ENST00000381990 VWDEQ8N2E2 1590 aa12.23□□□□□ -0.45
GPNMB-202ENST00000381990 ZNF326Q5BKZ1 582 aaKnown RBP12.23□□□□□ -0.45
GPNMB-202ENST00000381990 MLH3Q9UHC1 1453 aa12.22□□□□□ -0.45
GPNMB-202ENST00000381990 E9PCH4 1651 aa12.22□□□□□ -0.45
GPNMB-202ENST00000381990 TET3O43151 1660 aa12.22□□□□□ -0.45
GPNMB-202ENST00000381990 PRDM15P57071 1507 aaPredicted RBP12.22□□□□□ -0.45
GPNMB-202ENST00000381990 GLI2P10070 1586 aa12.21□□□□□ -0.45
GPNMB-202ENST00000381990 MAP3K4Q9Y6R4 1608 aa12.21□□□□□ -0.45
GPNMB-202ENST00000381990 KIF3BO15066 747 aa12.21□□□□□ -0.45
GPNMB-202ENST00000381990 DCAF11Q8TEB1 546 aa12.21□□□□□ -0.45
GPNMB-202ENST00000381990 PPP4R2Q9NY27 417 aa12.21□□□□□ -0.45
GPNMB-202ENST00000381990 HECW2Q9P2P5 1572 aa12.21□□□□□ -0.46
GPNMB-202ENST00000381990 POLR1AO95602 1720 aaPredicted RBP12.21□□□□□ -0.46
GPNMB-202ENST00000381990 MROH1Q8NDA8 1641 aa12.2□□□□□ -0.46
GPNMB-202ENST00000381990 CCDC7Q96M83 1385 aa12.2□□□□□ -0.46
GPNMB-202ENST00000381990 A2MP01023 1474 aa12.2□□□□□ -0.46
GPNMB-202ENST00000381990 KDM2AQ9Y2K7 1162 aa12.2□□□□□ -0.46
GPNMB-202ENST00000381990 USP47Q96K76 1375 aa12.2□□□□□ -0.46
GPNMB-202ENST00000381990 PTPRTO14522 1441 aa12.19□□□□□ -0.46
GPNMB-202ENST00000381990 TRPM2O94759 1503 aa12.19□□□□□ -0.46
GPNMB-202ENST00000381990 SPHKAPQ2M3C7 1700 aa12.18□□□□□ -0.46
GPNMB-202ENST00000381990 PRAG1Q86YV5 1406 aa12.18□□□□□ -0.46
GPNMB-202ENST00000381990 RNF17Q9BXT8 1623 aaKnown RBP12.18□□□□□ -0.46
GPNMB-202ENST00000381990 CNTLNQ9NXG0 1405 aa12.18□□□□□ -0.46
GPNMB-202ENST00000381990 C11orf95C9JLR9 678 aaPredicted RBP12.18□□□□□ -0.46
GPNMB-202ENST00000381990 RGL3Q3MIN7 710 aa12.17□□□□□ -0.46
GPNMB-202ENST00000381990 CARD11Q9BXL7 1154 aa12.17□□□□□ -0.46
GPNMB-202ENST00000381990 TRPM1Q7Z4N2 1603 aa12.16□□□□□ -0.46
GPNMB-202ENST00000381990 ABCA6Q8N139 1617 aa12.16□□□□□ -0.46
GPNMB-202ENST00000381990 FRMPD1Q5SYB0 1578 aa12.16□□□□□ -0.46
GPNMB-202ENST00000381990 BCORL1Q5H9F3 1711 aa12.15□□□□□ -0.46
GPNMB-202ENST00000381990 LMTK2Q8IWU2 1503 aa12.15□□□□□ -0.46
GPNMB-202ENST00000381990 RICTORQ6R327 1708 aa12.15□□□□□ -0.46
GPNMB-202ENST00000381990 KIF7Q2M1P5 1343 aa12.15□□□□□ -0.46
GPNMB-202ENST00000381990 DIP2BQ9P265 1576 aa12.15□□□□□ -0.46
GPNMB-202ENST00000381990 CEP152O94986 1710 aa12.15□□□□□ -0.46
GPNMB-202ENST00000381990 EFCAB6Q5THR3 1501 aa12.15□□□□□ -0.46
GPNMB-202ENST00000381990 ZBED9Q6R2W3 1325 aa12.15□□□□□ -0.47
GPNMB-202ENST00000381990 ROCK2O75116 1388 aaKnown RBP12.14□□□□□ -0.47
GPNMB-202ENST00000381990 RAPGEF3O95398 923 aa12.14□□□□□ -0.47
GPNMB-202ENST00000381990 CLTCL1P53675 1640 aa12.14□□□□□ -0.47
GPNMB-202ENST00000381990 ARID4BQ4LE39 1312 aaPredicted RBP12.14□□□□□ -0.47
GPNMB-202ENST00000381990 GPRASP1Q5JY77 1395 aa12.13□□□□□ -0.47
GPNMB-202ENST00000381990 LAMC1P11047 1609 aa12.12□□□□□ -0.47
GPNMB-202ENST00000381990 PPRC1Q5VV67 1664 aaKnown RBP12.12□□□□□ -0.47
GPNMB-202ENST00000381990 FAM69CQ0P6D2 419 aa12.12□□□□□ -0.47
GPNMB-202ENST00000381990 NEURL4Q96JN8 1562 aa12.12□□□□□ -0.47
GPNMB-202ENST00000381990 DIP2CQ9Y2E4 1556 aa12.12□□□□□ -0.47
GPNMB-202ENST00000381990 STAC3Q96MF2 364 aa12.12□□□□□ -0.47
GPNMB-202ENST00000381990 IRX6P78412 446 aaPredicted RBP12.11□□□□□ -0.47
GPNMB-202ENST00000381990 PRKRIP1Q9H875 184 aaPredicted RBP12.1□□□□□ -0.47
GPNMB-202ENST00000381990 ST20-MTHFSA0A0A6YYL1 179 aa12.09□□□□□ -0.47
GPNMB-202ENST00000381990 ZMYM4Q5VZL5 1548 aa12.09□□□□□ -0.47
GPNMB-202ENST00000381990 MADDQ8WXG6 1647 aa12.08□□□□□ -0.48
GPNMB-202ENST00000381990 NBPF1Q3BBV0 1214 aa12.08□□□□□ -0.48
GPNMB-202ENST00000381990 GGT6Q6P531 493 aa12.08□□□□□ -0.48
GPNMB-202ENST00000381990 ABCC3O15438 1527 aa12.07□□□□□ -0.48
GPNMB-202ENST00000381990 KIF1BO60333 1816 aa12.07□□□□□ -0.48
GPNMB-202ENST00000381990 YEATS2Q9ULM3 1422 aa12.07□□□□□ -0.48
GPNMB-202ENST00000381990 TSPOAP1O95153 1857 aa12.06□□□□□ -0.48
GPNMB-202ENST00000381990 NPATQ14207 1427 aa12.06□□□□□ -0.48
GPNMB-202ENST00000381990 MRS2Q9HD23 443 aa12.06□□□□□ -0.48
GPNMB-202ENST00000381990 UGGT1Q9NYU2 1555 aa12.05□□□□□ -0.48
GPNMB-202ENST00000381990 WASHC2CQ9Y4E1 1318 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms