RNA–Protein interactions for RNA: ENST00000381565.2

APOBEC3F-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3F, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-202ENST00000381565 MAPK8IP2Q13387 824 aaPredicted RBP18.08■□□□□ 0.48
APOBEC3F-202ENST00000381565 CLTCQ00610 1675 aaKnown RBP18.08■□□□□ 0.48
APOBEC3F-202ENST00000381565 NCOA1Q15788 1441 aa18.07■□□□□ 0.48
APOBEC3F-202ENST00000381565 CNTLNQ9NXG0 1405 aa18.06■□□□□ 0.48
APOBEC3F-202ENST00000381565 SHANK2Q9UPX8 1470 aa18.05■□□□□ 0.48
APOBEC3F-202ENST00000381565 ILDR2Q71H61 639 aa18.04■□□□□ 0.48
APOBEC3F-202ENST00000381565 EIF2AK4Q9P2K8 1649 aaKnown RBP18.03■□□□□ 0.48
APOBEC3F-202ENST00000381565 RNF17Q9BXT8 1623 aaKnown RBP18.02■□□□□ 0.48
APOBEC3F-202ENST00000381565 NPATQ14207 1427 aa18.02■□□□□ 0.48
APOBEC3F-202ENST00000381565 RSPH4AQ5TD94 716 aa18.02■□□□□ 0.48
APOBEC3F-202ENST00000381565 ABCC5O15440 1437 aa18.01■□□□□ 0.47
APOBEC3F-202ENST00000381565 DAPK1P53355 1430 aa18.01■□□□□ 0.47
APOBEC3F-202ENST00000381565 DISP3Q9P2K9 1392 aa18.01■□□□□ 0.47
APOBEC3F-202ENST00000381565 CAMSAP1Q5T5Y3 1602 aa18.01■□□□□ 0.47
APOBEC3F-202ENST00000381565 DHX29Q7Z478 1369 aaKnown RBP18■□□□□ 0.47
APOBEC3F-202ENST00000381565 MROH1Q8NDA8 1641 aa17.99■□□□□ 0.47
APOBEC3F-202ENST00000381565 ESF1Q9H501 851 aaKnown RBP17.99■□□□□ 0.47
APOBEC3F-202ENST00000381565 IQSEC2Q5JU85 1478 aa17.99■□□□□ 0.47
APOBEC3F-202ENST00000381565 NCBP3Q53F19 620 aaKnown RBP17.98■□□□□ 0.47
APOBEC3F-202ENST00000381565 ZMYM3Q14202 1370 aa17.98■□□□□ 0.47
APOBEC3F-202ENST00000381565 ZNF142P52746 1687 aaPredicted RBP17.96■□□□□ 0.47
APOBEC3F-202ENST00000381565 SPATA31D1Q6ZQQ2 1576 aa17.96■□□□□ 0.47
APOBEC3F-202ENST00000381565 CNKSR2Q8WXI2 1034 aa17.96■□□□□ 0.47
APOBEC3F-202ENST00000381565 MYO3AQ8NEV4 1616 aa17.96■□□□□ 0.47
APOBEC3F-202ENST00000381565 DUOX2Q9NRD8 1548 aa17.95■□□□□ 0.46
APOBEC3F-202ENST00000381565 FAM135AQ9P2D6 1515 aa17.95■□□□□ 0.46
APOBEC3F-202ENST00000381565 ZC3H13Q5T200 1668 aaKnown RBP17.95■□□□□ 0.46
APOBEC3F-202ENST00000381565 CEP152O94986 1710 aa17.95■□□□□ 0.46
APOBEC3F-202ENST00000381565 TSPY4P0CV99 314 aa17.94■□□□□ 0.46
APOBEC3F-202ENST00000381565 TSPY10P0CW01 314 aa17.94■□□□□ 0.46
APOBEC3F-202ENST00000381565 PTPRKQ15262 1439 aa17.94■□□□□ 0.46
APOBEC3F-202ENST00000381565 DEPDC5O75140 1603 aa17.94■□□□□ 0.46
APOBEC3F-202ENST00000381565 KDM5DQ9BY66 1539 aa17.93■□□□□ 0.46
APOBEC3F-202ENST00000381565 NCKAP5LQ9HCH0 1330 aa17.93■□□□□ 0.46
APOBEC3F-202ENST00000381565 CEP170BQ9Y4F5 1589 aaPredicted RBP17.92■□□□□ 0.46
APOBEC3F-202ENST00000381565 ADGRL2O95490 1459 aa17.92■□□□□ 0.46
APOBEC3F-202ENST00000381565 PLA2R1Q13018 1463 aa17.92■□□□□ 0.46
APOBEC3F-202ENST00000381565 SOCS7O14512 581 aa17.91■□□□□ 0.46
APOBEC3F-202ENST00000381565 ZNF335Q9H4Z2 1342 aaPredicted RBP17.91■□□□□ 0.46
APOBEC3F-202ENST00000381565 PRDM15P57071 1507 aaPredicted RBP17.9■□□□□ 0.46
APOBEC3F-202ENST00000381565 PPARGC1BQ86YN6 1023 aaKnown RBP17.9■□□□□ 0.46
APOBEC3F-202ENST00000381565 KIF15Q9NS87 1388 aa17.9■□□□□ 0.46
APOBEC3F-202ENST00000381565 GGT6Q6P531 493 aa17.88■□□□□ 0.45
APOBEC3F-202ENST00000381565 ERBINQ96RT1 1412 aa17.88■□□□□ 0.45
APOBEC3F-202ENST00000381565 ABCC3O15438 1527 aa17.88■□□□□ 0.45
APOBEC3F-202ENST00000381565 KIF3BO15066 747 aa17.87■□□□□ 0.45
APOBEC3F-202ENST00000381565 FAM50AQ14320 339 aaKnown RBP17.85■□□□□ 0.45
APOBEC3F-202ENST00000381565 CFAP65Q6ZU64 1925 aaKnown RBP17.84■□□□□ 0.45
APOBEC3F-202ENST00000381565 ANKRD30AQ9BXX3 1397 aa17.83■□□□□ 0.45
APOBEC3F-202ENST00000381565 PKD2Q13563 968 aa17.83■□□□□ 0.44
APOBEC3F-202ENST00000381565 A2ML1A8K2U0 1454 aa17.82■□□□□ 0.44
APOBEC3F-202ENST00000381565 PZPP20742 1482 aa17.82■□□□□ 0.44
APOBEC3F-202ENST00000381565 RRBP1Q9P2E9 1410 aaKnown RBP17.82■□□□□ 0.44
APOBEC3F-202ENST00000381565 NPM3O75607 178 aaKnown RBP17.82■□□□□ 0.44
APOBEC3F-202ENST00000381565 CHIC2Q9UKJ5 165 aa17.82■□□□□ 0.44
APOBEC3F-202ENST00000381565 VWDEQ8N2E2 1590 aa17.82■□□□□ 0.44
APOBEC3F-202ENST00000381565 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.81■□□□□ 0.44
APOBEC3F-202ENST00000381565 RRP7BPQ9NSQ0 103 aa17.81■□□□□ 0.44
APOBEC3F-202ENST00000381565 NEURL4Q96JN8 1562 aa17.8■□□□□ 0.44
APOBEC3F-202ENST00000381565 UNC13BO14795 1591 aa17.79■□□□□ 0.44
APOBEC3F-202ENST00000381565 UBAP1LF5GYI3 381 aa17.79■□□□□ 0.44
APOBEC3F-202ENST00000381565 GCC2Q8IWJ2 1684 aa17.77■□□□□ 0.43
APOBEC3F-202ENST00000381565 POLR1AO95602 1720 aaPredicted RBP17.75■□□□□ 0.43
APOBEC3F-202ENST00000381565 WASHC2CQ9Y4E1 1318 aa17.75■□□□□ 0.43
APOBEC3F-202ENST00000381565 FBXO31Q5XUX0 539 aaPredicted RBP17.75■□□□□ 0.43
APOBEC3F-202ENST00000381565 LMTK2Q8IWU2 1503 aa17.75■□□□□ 0.43
APOBEC3F-202ENST00000381565 ROCK1Q13464 1354 aa17.75■□□□□ 0.43
APOBEC3F-202ENST00000381565 ANKRD50Q9ULJ7 1429 aa17.74■□□□□ 0.43
APOBEC3F-202ENST00000381565 TNRQ92752 1358 aa17.74■□□□□ 0.43
APOBEC3F-202ENST00000381565 EFCAB6Q5THR3 1501 aa17.73■□□□□ 0.43
APOBEC3F-202ENST00000381565 ERVK-7P63135 1459 aa17.73■□□□□ 0.43
APOBEC3F-202ENST00000381565 TET3O43151 1660 aa17.72■□□□□ 0.43
APOBEC3F-202ENST00000381565 IQGAP3Q86VI3 1631 aa17.71■□□□□ 0.43
APOBEC3F-202ENST00000381565 CPS1P31327 1500 aa17.7■□□□□ 0.42
APOBEC3F-202ENST00000381565 ARHGAP31Q2M1Z3 1444 aa17.7■□□□□ 0.42
APOBEC3F-202ENST00000381565 UBR1Q8IWV7 1749 aa17.69■□□□□ 0.42
APOBEC3F-202ENST00000381565 ALKQ9UM73 1620 aa17.69■□□□□ 0.42
APOBEC3F-202ENST00000381565 E9PCH4 1651 aa17.67■□□□□ 0.42
APOBEC3F-202ENST00000381565 SYNMO15061 1565 aa17.67■□□□□ 0.42
APOBEC3F-202ENST00000381565 ITGAEP38570 1179 aa17.67■□□□□ 0.42
APOBEC3F-202ENST00000381565 NLRP1Q9C000 1473 aa17.67■□□□□ 0.42
APOBEC3F-202ENST00000381565 MED1Q15648 1581 aaPredicted RBP17.66■□□□□ 0.42
APOBEC3F-202ENST00000381565 HSPA1LP34931 641 aa17.66■□□□□ 0.42
APOBEC3F-202ENST00000381565 MED14O60244 1454 aa17.66■□□□□ 0.42
APOBEC3F-202ENST00000381565 KANK1Q14678 1352 aa17.66■□□□□ 0.42
APOBEC3F-202ENST00000381565 PIK3C2BO00750 1634 aa17.65■□□□□ 0.42
APOBEC3F-202ENST00000381565 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.64■□□□□ 0.41
APOBEC3F-202ENST00000381565 UGGT1Q9NYU2 1555 aa17.64■□□□□ 0.41
APOBEC3F-202ENST00000381565 MYO5BQ9ULV0 1848 aa17.63■□□□□ 0.41
APOBEC3F-202ENST00000381565 KDM5AP29375 1690 aaKnown RBP17.63■□□□□ 0.41
APOBEC3F-202ENST00000381565 NPHP4O75161 1426 aaPredicted RBP17.63■□□□□ 0.41
APOBEC3F-202ENST00000381565 PIP4K2BP78356 416 aa17.62■□□□□ 0.41
APOBEC3F-202ENST00000381565 STRCP1A6NGW2 1772 aa17.61■□□□□ 0.41
APOBEC3F-202ENST00000381565 ANKLE2Q86XL3 938 aa17.61■□□□□ 0.41
APOBEC3F-202ENST00000381565 RNF216Q9NWF9 866 aaPredicted RBP17.61■□□□□ 0.41
APOBEC3F-202ENST00000381565 NAIPQ13075 1403 aa17.61■□□□□ 0.41
APOBEC3F-202ENST00000381565 RPRD2Q5VT52 1461 aaKnown RBP17.6■□□□□ 0.41
APOBEC3F-202ENST00000381565 IQGAP1P46940 1657 aa17.6■□□□□ 0.41
APOBEC3F-202ENST00000381565 NOS1P29475 1434 aa17.59■□□□□ 0.41
APOBEC3F-202ENST00000381565 TOM1O60784 492 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms