RNA–Protein interactions for RNA: ENST00000380918.7

SREK1-203, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,433 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-203ENST00000380918 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.56□□□□□ -1.042e-7■■■□□ 15.7
SREK1-203ENST00000380918 CALR3Q96L12 384 aaKnown RBP8.56□□□□□ -1.04
SREK1-203ENST00000380918 RBM19Q9Y4C8 960 aaKnown RBP8.56□□□□□ -1.04
SREK1-203ENST00000380918 MARCH6O60337 910 aa8.55□□□□□ -1.04
SREK1-203ENST00000380918 CLSTN1O94985 981 aa8.55□□□□□ -1.04
SREK1-203ENST00000380918 GLMNQ92990 594 aa8.55□□□□□ -1.04
SREK1-203ENST00000380918 ANKRD62A6NC57 917 aa8.55□□□□□ -1.04
SREK1-203ENST00000380918 FBXO31Q5XUX0 539 aaPredicted RBP8.55□□□□□ -1.04
SREK1-203ENST00000380918 NOM1Q5C9Z4 860 aaKnown RBP8.54□□□□□ -1.04
SREK1-203ENST00000380918 OSCARQ8IYS5 282 aa8.54□□□□□ -1.04
SREK1-203ENST00000380918 OXER1Q8TDS5 423 aa8.54□□□□□ -1.04
SREK1-203ENST00000380918 SSUH2Q9Y2M2 353 aa8.54□□□□□ -1.04
SREK1-203ENST00000380918 ANKRD13AQ8IZ07 590 aa8.54□□□□□ -1.04
SREK1-203ENST00000380918 GDPD2Q9HCC8 539 aa8.54□□□□□ -1.04
SREK1-203ENST00000380918 GIGYF2Q6Y7W6 1299 aaKnown RBP8.53□□□□□ -1.04
SREK1-203ENST00000380918 FOSBP53539 338 aa8.53□□□□□ -1.04
SREK1-203ENST00000380918 DRC1Q96MC2 740 aa8.53□□□□□ -1.04
SREK1-203ENST00000380918 LOC102724159A0A0B4J2E5 919 aa8.52□□□□□ -1.05
SREK1-203ENST00000380918 TCF3P15923 654 aa8.52□□□□□ -1.05
SREK1-203ENST00000380918 PWP2Q15269 919 aaKnown RBP8.52□□□□□ -1.05
SREK1-203ENST00000380918 RASEFQ8IZ41 740 aa8.52□□□□□ -1.05
SREK1-203ENST00000380918 IRF6O14896 467 aa8.52□□□□□ -1.05
SREK1-203ENST00000380918 SREK1Q8WXA9 508 aaKnown RBP8.51□□□□□ -1.05
SREK1-203ENST00000380918 HIRIP3Q9BW71 556 aaPredicted RBP8.51□□□□□ -1.05
SREK1-203ENST00000380918 PRDM10Q9NQV6 1147 aa8.51□□□□□ -1.05
SREK1-203ENST00000380918 FAM212AQ96EL1 285 aa8.5□□□□□ -1.05
SREK1-203ENST00000380918 ZNF16P17020 682 aaPredicted RBP8.5□□□□□ -1.05
SREK1-203ENST00000380918 PBXIP1Q96AQ6 731 aa8.5□□□□□ -1.05
SREK1-203ENST00000380918 PATL2C9JE40 543 aaKnown RBP8.49□□□□□ -1.05
SREK1-203ENST00000380918 MAP2K5Q13163 448 aa8.49□□□□□ -1.05
SREK1-203ENST00000380918 ATP1B4Q9UN42 357 aaPredicted RBP8.49□□□□□ -1.05
SREK1-203ENST00000380918 RIPOR2Q9Y4F9 1068 aa8.49□□□□□ -1.05
SREK1-203ENST00000380918 ABCB7O75027 752 aa8.49□□□□□ -1.05
SREK1-203ENST00000380918 SLC52A1Q9NWF4 448 aa8.49□□□□□ -1.05
SREK1-203ENST00000380918 SALL2Q9Y467 1007 aaPredicted RBP8.49□□□□□ -1.05
SREK1-203ENST00000380918 ZC3H4Q9UPT8 1303 aaKnown RBP8.48□□□□□ -1.05
SREK1-203ENST00000380918 MICAL1Q8TDZ2 1067 aa8.48□□□□□ -1.05
SREK1-203ENST00000380918 POLR3EQ9NVU0 708 aa8.48□□□□□ -1.05
SREK1-203ENST00000380918 MINK1Q8N4C8 1332 aaPredicted RBP8.48□□□□□ -1.05
SREK1-203ENST00000380918 TBC1D12O60347 775 aa8.48□□□□□ -1.05
SREK1-203ENST00000380918 DEKP35659 375 aaKnown RBP8.48□□□□□ -1.05
SREK1-203ENST00000380918 ADAMTS19Q8TE59 1207 aa8.48□□□□□ -1.05
SREK1-203ENST00000380918 FGD1P98174 961 aa8.47□□□□□ -1.05
SREK1-203ENST00000380918 RAB11FIP3O75154 756 aa8.46□□□□□ -1.05
SREK1-203ENST00000380918 CHRM1P11229 460 aaPredicted RBP8.46□□□□□ -1.06
SREK1-203ENST00000380918 SH3D19Q5HYK7 790 aa8.46□□□□□ -1.06
SREK1-203ENST00000380918 DNAJC14Q6Y2X3 702 aaPredicted RBP8.46□□□□□ -1.06
SREK1-203ENST00000380918 USTQ9Y2C2 406 aa8.46□□□□□ -1.06
SREK1-203ENST00000380918 PPME1Q9Y570 386 aa8.46□□□□□ -1.06
SREK1-203ENST00000380918 SRPK2P78362 688 aaKnown RBP8.45□□□□□ -1.06
SREK1-203ENST00000380918 CFAP70Q5T0N1 1121 aa8.45□□□□□ -1.06
SREK1-203ENST00000380918 CSB-PGBD3P0DP91 1061 aa8.45□□□□□ -1.06
SREK1-203ENST00000380918 RB1CC1Q8TDY2 1594 aa8.44□□□□□ -1.06
SREK1-203ENST00000380918 ABCC9O60706 1549 aa8.44□□□□□ -1.06
SREK1-203ENST00000380918 DDX27Q96GQ7 796 aaKnown RBP8.44□□□□□ -1.06
SREK1-203ENST00000380918 WRNQ14191 1432 aaPredicted RBP eCLIP8.43□□□□□ -1.06
SREK1-203ENST00000380918 SPDYE2BA6NHP3 402 aa8.43□□□□□ -1.06
SREK1-203ENST00000380918 SPDYE5A6NIY4 337 aa8.43□□□□□ -1.06
SREK1-203ENST00000380918 TMEM88BA6NKF7 163 aa8.43□□□□□ -1.06
SREK1-203ENST00000380918 SPDYE6P0CI01 402 aa8.43□□□□□ -1.06
SREK1-203ENST00000380918 SPDYE2Q495Y8 402 aa8.43□□□□□ -1.06
SREK1-203ENST00000380918 RBM27Q9P2N5 1060 aaKnown RBP8.43□□□□□ -1.06
SREK1-203ENST00000380918 SUGT1Q9Y2Z0 365 aa8.43□□□□□ -1.06
SREK1-203ENST00000380918 CANXP27824 592 aaKnown RBP8.43□□□□□ -1.06
SREK1-203ENST00000380918 ABL2P42684 1182 aa8.43□□□□□ -1.06
SREK1-203ENST00000380918 CDCA8Q53HL2 280 aa8.43□□□□□ -1.06
SREK1-203ENST00000380918 GIPC2Q8TF65 315 aa8.43□□□□□ -1.06
SREK1-203ENST00000380918 GPATCH3Q96I76 525 aa8.43□□□□□ -1.06
SREK1-203ENST00000380918 DPYSL4O14531 572 aa8.42□□□□□ -1.06
SREK1-203ENST00000380918 TAGLNQ01995 201 aaKnown RBP8.42□□□□□ -1.06
SREK1-203ENST00000380918 CAMK2BQ13554 666 aa8.42□□□□□ -1.06
SREK1-203ENST00000380918 VTI1AQ96AJ9 217 aa8.42□□□□□ -1.06
SREK1-203ENST00000380918 ITGAEP38570 1179 aa8.42□□□□□ -1.06
SREK1-203ENST00000380918 MFSD10Q14728 455 aa8.42□□□□□ -1.06
SREK1-203ENST00000380918 ZNF467Q7Z7K2 595 aaPredicted RBP8.42□□□□□ -1.06
SREK1-203ENST00000380918 FANCIQ9NVI1 1328 aa8.41□□□□□ -1.06
SREK1-203ENST00000380918 MTMR14Q8NCE2 650 aa8.41□□□□□ -1.06
SREK1-203ENST00000380918 FBXO22Q8NEZ5 403 aa8.41□□□□□ -1.06
SREK1-203ENST00000380918 NUTM2FA1L443 756 aa8.41□□□□□ -1.06
SREK1-203ENST00000380918 NCLP19338 710 aaKnown RBP8.41□□□□□ -1.06
SREK1-203ENST00000380918 VRTNQ9H8Y1 702 aa8.41□□□□□ -1.06
SREK1-203ENST00000380918 BCL2L13Q9BXK5 485 aa8.4□□□□□ -1.06
SREK1-203ENST00000380918 KLHL42Q9P2K6 505 aa8.4□□□□□ -1.06
SREK1-203ENST00000380918 TBC1D2BQ9UPU7 963 aa8.4□□□□□ -1.06
SREK1-203ENST00000380918 NAALADL2Q58DX5 795 aa8.4□□□□□ -1.07
SREK1-203ENST00000380918 TEX2Q8IWB9 1127 aa8.4□□□□□ -1.07
SREK1-203ENST00000380918 PKNOX2Q96KN3 472 aa8.39□□□□□ -1.07
SREK1-203ENST00000380918 CRISPLD2Q9H0B8 497 aa8.39□□□□□ -1.07
SREK1-203ENST00000380918 PHF8Q9UPP1 1060 aa8.39□□□□□ -1.07
SREK1-203ENST00000380918 ERICH6BQ5W0A0 696 aa8.39□□□□□ -1.07
SREK1-203ENST00000380918 DPH6Q7L8W6 267 aa8.39□□□□□ -1.07
SREK1-203ENST00000380918 EXOC8Q8IYI6 725 aa8.39□□□□□ -1.07
SREK1-203ENST00000380918 UBXN4Q92575 508 aa8.39□□□□□ -1.07
SREK1-203ENST00000380918 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.38□□□□□ -1.07
SREK1-203ENST00000380918 CDCA7Q9BWT1 371 aaPredicted RBP8.38□□□□□ -1.07
SREK1-203ENST00000380918 DNAJC2Q99543 621 aaKnown RBP8.38□□□□□ -1.07
SREK1-203ENST00000380918 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.38□□□□□ -1.07
SREK1-203ENST00000380918 PLEKHD1A6NEE1 506 aa8.37□□□□□ -1.07
SREK1-203ENST00000380918 PEX14O75381 377 aa8.37□□□□□ -1.07
SREK1-203ENST00000380918 TSR1Q2NL82 804 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms