RNA–Protein interactions for RNA: ENST00000380875.7

FREM1-201, Transcript of FRAS1 related extracellular matrix 1, humanhuman

TSL 1 (best)

Gene FREM1, Length 6,126 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1-201ENST00000380875 CFAP44Q96MT7 982 aa11.6□□□□□ -0.55
FREM1-201ENST00000380875 TRAK1Q9UPV9 953 aa11.6□□□□□ -0.55
FREM1-201ENST00000380875 VPS37DQ86XT2 251 aa11.59□□□□□ -0.55
FREM1-201ENST00000380875 SMARCA2P51531 1590 aa11.59□□□□□ -0.55
FREM1-201ENST00000380875 RBM33Q96EV2 1170 aaKnown RBP11.58□□□□□ -0.56
FREM1-201ENST00000380875 NUTM2BA6NNL0 878 aaPredicted RBP11.57□□□□□ -0.56
FREM1-201ENST00000380875 NUTM2EB1AL46 878 aaPredicted RBP11.57□□□□□ -0.56
FREM1-201ENST00000380875 NUTM2AQ8IVF1 878 aaPredicted RBP11.57□□□□□ -0.56
FREM1-201ENST00000380875 COG3Q96JB2 828 aa11.57□□□□□ -0.56
FREM1-201ENST00000380875 PIP4K2BP78356 416 aa11.57□□□□□ -0.56
FREM1-201ENST00000380875 CEP89Q96ST8 783 aa11.57□□□□□ -0.56
FREM1-201ENST00000380875 LMOD3Q0VAK6 560 aa11.56□□□□□ -0.56
FREM1-201ENST00000380875 HTATSF1O43719 755 aaKnown RBP11.56□□□□□ -0.56
FREM1-201ENST00000380875 TNIKQ9UKE5 1360 aa11.56□□□□□ -0.56
FREM1-201ENST00000380875 SMC4Q9NTJ3 1288 aa11.56□□□□□ -0.56
FREM1-201ENST00000380875 HMMRO75330 724 aa11.55□□□□□ -0.56
FREM1-201ENST00000380875 DHX16O60231 1041 aaKnown RBP11.55□□□□□ -0.56
FREM1-201ENST00000380875 TEFQ10587 303 aa11.55□□□□□ -0.56
FREM1-201ENST00000380875 CCDC146Q8IYE0 955 aa11.54□□□□□ -0.56
FREM1-201ENST00000380875 JPH4Q96JJ6 628 aa11.54□□□□□ -0.56
FREM1-201ENST00000380875 HSPA5P11021 654 aaKnown RBP11.54□□□□□ -0.56
FREM1-201ENST00000380875 NOL8Q76FK4 1167 aaKnown RBP11.54□□□□□ -0.56
FREM1-201ENST00000380875 CCDC34Q96HJ3 373 aa11.54□□□□□ -0.56
FREM1-201ENST00000380875 TPM4P67936 248 aa11.54□□□□□ -0.56
FREM1-201ENST00000380875 A0A0U1RQG5 324 aaPredicted RBP11.53□□□□□ -0.56
FREM1-201ENST00000380875 EIF2S2P20042 333 aaKnown RBP11.53□□□□□ -0.56
FREM1-201ENST00000380875 FBXO3Q9UK99 471 aa11.53□□□□□ -0.56
FREM1-201ENST00000380875 MINK1Q8N4C8 1332 aaPredicted RBP11.53□□□□□ -0.56
FREM1-201ENST00000380875 AKAP17AQ02040 695 aaKnown RBP11.52□□□□□ -0.56
FREM1-201ENST00000380875 CCAR1Q8IX12 1150 aaKnown RBP11.52□□□□□ -0.57
FREM1-201ENST00000380875 USP35Q9P2H5 1018 aa11.51□□□□□ -0.57
FREM1-201ENST00000380875 MPHOSPH9Q99550 1183 aa11.51□□□□□ -0.57
FREM1-201ENST00000380875 NEXNQ0ZGT2 675 aa11.5□□□□□ -0.57
FREM1-201ENST00000380875 RWDD1Q9H446 243 aaPredicted RBP11.5□□□□□ -0.57
FREM1-201ENST00000380875 PES1O00541 588 aaKnown RBP11.5□□□□□ -0.57
FREM1-201ENST00000380875 FMN1Q68DA7 1419 aa11.5□□□□□ -0.57
FREM1-201ENST00000380875 NECTIN2Q92692 538 aa11.5□□□□□ -0.57
FREM1-201ENST00000380875 WASHC2AQ641Q2 1341 aa11.5□□□□□ -0.57
FREM1-201ENST00000380875 NAP1L5Q96NT1 182 aaPredicted RBP11.49□□□□□ -0.57
FREM1-201ENST00000380875 CCDC43Q96MW1 224 aaKnown RBP11.49□□□□□ -0.57
FREM1-201ENST00000380875 VGFO15240 615 aaPredicted RBP11.48□□□□□ -0.57
FREM1-201ENST00000380875 NUTM2GQ5VZR2 741 aa11.48□□□□□ -0.57
FREM1-201ENST00000380875 SETD5Q9C0A6 1442 aa11.48□□□□□ -0.57
FREM1-201ENST00000380875 SYNE3Q6ZMZ3 975 aa11.48□□□□□ -0.57
FREM1-201ENST00000380875 CCDC18Q5T9S5 1454 aa11.48□□□□□ -0.57
FREM1-201ENST00000380875 PPP4R2Q9NY27 417 aa11.48□□□□□ -0.57
FREM1-201ENST00000380875 PTPRGP23470 1445 aa11.48□□□□□ -0.57
FREM1-201ENST00000380875 APPP05067 770 aa11.48□□□□□ -0.57
FREM1-201ENST00000380875 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.48□□□□□ -0.57
FREM1-201ENST00000380875 FYB1O15117 783 aa11.47□□□□□ -0.57
FREM1-201ENST00000380875 STRN4Q9NRL3 753 aa11.47□□□□□ -0.57
FREM1-201ENST00000380875 NLRP2Q9NX02 1062 aa11.47□□□□□ -0.57
FREM1-201ENST00000380875 UACAQ9BZF9 1416 aa11.47□□□□□ -0.57
FREM1-201ENST00000380875 RSPH4AQ5TD94 716 aa11.47□□□□□ -0.57
FREM1-201ENST00000380875 RAPGEF4Q8WZA2 1011 aa11.47□□□□□ -0.57
FREM1-201ENST00000380875 TPD52L1Q16890 204 aaPredicted RBP11.46□□□□□ -0.57
FREM1-201ENST00000380875 FAM177BA6PVY3 158 aa11.46□□□□□ -0.57
FREM1-201ENST00000380875 C9orf78Q9NZ63 289 aaPredicted RBP11.46□□□□□ -0.57
FREM1-201ENST00000380875 EVC2Q86UK5 1308 aa11.46□□□□□ -0.58
FREM1-201ENST00000380875 ELL2O00472 640 aaPredicted RBP11.46□□□□□ -0.58
FREM1-201ENST00000380875 RRP7AQ9Y3A4 280 aaKnown RBP11.46□□□□□ -0.58
FREM1-201ENST00000380875 CLUAP1Q96AJ1 413 aa11.45□□□□□ -0.58
FREM1-201ENST00000380875 SF3A1Q15459 793 aaKnown RBP11.45□□□□□ -0.58
FREM1-201ENST00000380875 RILPL2Q969X0 211 aa11.45□□□□□ -0.58
FREM1-201ENST00000380875 MFAP1P55081 439 aaKnown RBP11.45□□□□□ -0.58
FREM1-201ENST00000380875 PROSER2Q86WR7 435 aaPredicted RBP11.44□□□□□ -0.58
FREM1-201ENST00000380875 KIF16BQ96L93 1317 aa11.44□□□□□ -0.58
FREM1-201ENST00000380875 RALBP1Q15311 655 aa11.44□□□□□ -0.58
FREM1-201ENST00000380875 H3BQV1 296 aa11.44□□□□□ -0.58
FREM1-201ENST00000380875 MSNP26038 577 aaKnown RBP11.44□□□□□ -0.58
FREM1-201ENST00000380875 CCDC27Q2M243 656 aa11.44□□□□□ -0.58
FREM1-201ENST00000380875 IFFO2Q5TF58 517 aa11.44□□□□□ -0.58
FREM1-201ENST00000380875 FHOD3Q2V2M9 1422 aa11.43□□□□□ -0.58
FREM1-201ENST00000380875 SLC4A3P48751 1232 aa11.43□□□□□ -0.58
FREM1-201ENST00000380875 PMFBP1Q8TBY8 1022 aa11.43□□□□□ -0.58
FREM1-201ENST00000380875 ESCO1Q5FWF5 840 aa11.43□□□□□ -0.58
FREM1-201ENST00000380875 IKQ13123 557 aaPredicted RBP11.42□□□□□ -0.58
FREM1-201ENST00000380875 LRRFIP1Q32MZ4 808 aaKnown RBP11.42□□□□□ -0.58
FREM1-201ENST00000380875 RBM42Q9BTD8 480 aaKnown RBP11.42□□□□□ -0.58
FREM1-201ENST00000380875 TPM2P07951 284 aa11.42□□□□□ -0.58
FREM1-201ENST00000380875 DDX58O95786 925 aaKnown RBP11.42□□□□□ -0.58
FREM1-201ENST00000380875 ABCC8Q09428 1581 aa11.42□□□□□ -0.58
FREM1-201ENST00000380875 FOXD4L1Q9NU39 408 aa11.42□□□□□ -0.58
FREM1-201ENST00000380875 PLIN1O60240 522 aa11.41□□□□□ -0.58
FREM1-201ENST00000380875 TMEM132AQ24JP5 1023 aa11.41□□□□□ -0.58
FREM1-201ENST00000380875 MTMR7Q9Y216 660 aa11.41□□□□□ -0.58
FREM1-201ENST00000380875 CCDC144AA2RUR9 1427 aa11.41□□□□□ -0.58
FREM1-201ENST00000380875 FAM184AQ8NB25 1140 aa11.41□□□□□ -0.58
FREM1-201ENST00000380875 KIF3AQ9Y496 699 aa11.41□□□□□ -0.58
FREM1-201ENST00000380875 CSPP1Q1MSJ5 1256 aa11.4□□□□□ -0.58
FREM1-201ENST00000380875 CCDC88BA6NC98 1476 aa11.4□□□□□ -0.58
FREM1-201ENST00000380875 CGNL1Q0VF96 1302 aa11.4□□□□□ -0.58
FREM1-201ENST00000380875 FOXD4L5Q5VV16 416 aaPredicted RBP11.4□□□□□ -0.58
FREM1-201ENST00000380875 FOXD4L4Q8WXT5 416 aaPredicted RBP11.4□□□□□ -0.58
FREM1-201ENST00000380875 CENPJQ9HC77 1338 aaPredicted RBP11.4□□□□□ -0.59
FREM1-201ENST00000380875 AIMP1Q12904 312 aaKnown RBP11.39□□□□□ -0.59
FREM1-201ENST00000380875 NFXL1Q6ZNB6 911 aa11.39□□□□□ -0.59
FREM1-201ENST00000380875 TRIM29Q14134 588 aa11.39□□□□□ -0.59
FREM1-201ENST00000380875 ERICH2A1L162 156 aa11.39□□□□□ -0.59
FREM1-201ENST00000380875 TPM3P06753 285 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms