RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 ANKRD50Q9ULJ7 1429 aa16.15■□□□□ 0.18
DNMT3A-204ENST00000380756 PTMAP06454 111 aaKnown RBP16.15■□□□□ 0.18
DNMT3A-204ENST00000380756 SMC4Q9NTJ3 1288 aa16.13■□□□□ 0.17
DNMT3A-204ENST00000380756 APAF1O14727 1248 aa16.13■□□□□ 0.17
DNMT3A-204ENST00000380756 GZF1Q9H116 711 aaPredicted RBP16.12■□□□□ 0.17
DNMT3A-204ENST00000380756 BRD4O60885 1362 aaPredicted RBP16.12■□□□□ 0.17
DNMT3A-204ENST00000380756 MLECQ14165 292 aa16.12■□□□□ 0.17
DNMT3A-204ENST00000380756 E9PSI1 815 aa16.11■□□□□ 0.17
DNMT3A-204ENST00000380756 NAIPQ13075 1403 aa16.11■□□□□ 0.17
DNMT3A-204ENST00000380756 HDGFL2Q7Z4V5 671 aaPredicted RBP16.11■□□□□ 0.17
DNMT3A-204ENST00000380756 RRP7AQ9Y3A4 280 aaKnown RBP16.11■□□□□ 0.17
DNMT3A-204ENST00000380756 MIA2Q96PC5 1412 aa16.11■□□□□ 0.17
DNMT3A-204ENST00000380756 PTPRGP23470 1445 aa16.1■□□□□ 0.17
DNMT3A-204ENST00000380756 ZBTB7CA1YPR0 619 aa16.1■□□□□ 0.17
DNMT3A-204ENST00000380756 MFAP1P55081 439 aaKnown RBP16.1■□□□□ 0.17
DNMT3A-204ENST00000380756 HMGXB3Q12766 1538 aa16.1■□□□□ 0.17
DNMT3A-204ENST00000380756 CGNL1Q0VF96 1302 aa16.1■□□□□ 0.17
DNMT3A-204ENST00000380756 TRAK1Q9UPV9 953 aa16.09■□□□□ 0.17
DNMT3A-204ENST00000380756 AQRO60306 1485 aaKnown RBP eCLIP16.09■□□□□ 0.171e-7■■■■■ 30
DNMT3A-204ENST00000380756 HAP1P54257 671 aaPredicted RBP16.08■□□□□ 0.17
DNMT3A-204ENST00000380756 TPRNQ4KMQ1 711 aa16.08■□□□□ 0.16
DNMT3A-204ENST00000380756 PNISRQ8TF01 805 aaKnown RBP16.08■□□□□ 0.16
DNMT3A-204ENST00000380756 BCL2L13Q9BXK5 485 aa16.08■□□□□ 0.16
DNMT3A-204ENST00000380756 COG6Q9Y2V7 657 aa16.08■□□□□ 0.16
DNMT3A-204ENST00000380756 AKNAQ7Z591 1439 aa16.07■□□□□ 0.16
DNMT3A-204ENST00000380756 GSE1Q14687 1217 aa16.07■□□□□ 0.16
DNMT3A-204ENST00000380756 GBP4Q96PP9 640 aa16.07■□□□□ 0.16
DNMT3A-204ENST00000380756 CDCA7LQ96GN5 454 aa16.07■□□□□ 0.16
DNMT3A-204ENST00000380756 DNTTIP2Q5QJE6 756 aaKnown RBP16.06■□□□□ 0.16
DNMT3A-204ENST00000380756 EHBP1L1Q8N3D4 1523 aa16.06■□□□□ 0.16
DNMT3A-204ENST00000380756 POLA1P09884 1462 aaPredicted RBP16.06■□□□□ 0.16
DNMT3A-204ENST00000380756 CALD1Q05682 793 aaKnown RBP16.06■□□□□ 0.16
DNMT3A-204ENST00000380756 CFAP44Q96MT7 982 aa16.06■□□□□ 0.16
DNMT3A-204ENST00000380756 MAP3K1Q13233 1512 aa16.05■□□□□ 0.16
DNMT3A-204ENST00000380756 TERF2IPQ9NYB0 399 aa16.04■□□□□ 0.16
DNMT3A-204ENST00000380756 APBB1O00213 710 aa16.04■□□□□ 0.16
DNMT3A-204ENST00000380756 NGEFQ8N5V2 710 aa16.04■□□□□ 0.16
DNMT3A-204ENST00000380756 TOPBP1Q92547 1522 aa16.04■□□□□ 0.16
DNMT3A-204ENST00000380756 SOX12O15370 315 aa16.04■□□□□ 0.16
DNMT3A-204ENST00000380756 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.03■□□□□ 0.16
DNMT3A-204ENST00000380756 GOLGA6L3A6NEY3 463 aa16.03■□□□□ 0.16
DNMT3A-204ENST00000380756 ADAMTS8Q9UP79 889 aa16.03■□□□□ 0.16
DNMT3A-204ENST00000380756 KIAA1107Q9UPP5 1409 aa16.02■□□□□ 0.16
DNMT3A-204ENST00000380756 PAK3O75914 559 aaPredicted RBP16.02■□□□□ 0.15
DNMT3A-204ENST00000380756 NUTM2DQ5VT03 806 aaPredicted RBP16.02■□□□□ 0.15
DNMT3A-204ENST00000380756 BICRAQ9NZM4 1560 aa16.01■□□□□ 0.15
DNMT3A-204ENST00000380756 C11orf95C9JLR9 678 aaPredicted RBP16.01■□□□□ 0.15
DNMT3A-204ENST00000380756 PLCB2Q00722 1185 aa16.01■□□□□ 0.15
DNMT3A-204ENST00000380756 NESP48681 1621 aa16.01■□□□□ 0.15
DNMT3A-204ENST00000380756 SMG6Q86US8 1419 aaKnown RBP16■□□□□ 0.15
DNMT3A-204ENST00000380756 WASHC2CQ9Y4E1 1318 aa16■□□□□ 0.15
DNMT3A-204ENST00000380756 MRC2Q9UBG0 1479 aa16■□□□□ 0.15
DNMT3A-204ENST00000380756 PCF11O94913 1555 aaKnown RBP16■□□□□ 0.15
DNMT3A-204ENST00000380756 NBPF1Q3BBV0 1214 aa16■□□□□ 0.15
DNMT3A-204ENST00000380756 ZKSCAN2Q63HK3 967 aa15.99■□□□□ 0.15
DNMT3A-204ENST00000380756 PRDM2Q13029 1718 aa15.99■□□□□ 0.15
DNMT3A-204ENST00000380756 MSNP26038 577 aaKnown RBP15.99■□□□□ 0.15
DNMT3A-204ENST00000380756 OS9Q13438 667 aaPredicted RBP15.98■□□□□ 0.15
DNMT3A-204ENST00000380756 GRIN2BQ13224 1484 aa15.98■□□□□ 0.15
DNMT3A-204ENST00000380756 PTMSP20962 102 aa15.98■□□□□ 0.15
DNMT3A-204ENST00000380756 MCCP23508 829 aa15.98■□□□□ 0.15
DNMT3A-204ENST00000380756 FAM69CQ0P6D2 419 aa15.98■□□□□ 0.15
DNMT3A-204ENST00000380756 STAC3Q96MF2 364 aa15.97■□□□□ 0.15
DNMT3A-204ENST00000380756 PEG3Q9GZU2 1588 aa15.97■□□□□ 0.15
DNMT3A-204ENST00000380756 RTF1Q92541 710 aaKnown RBP15.97■□□□□ 0.15
DNMT3A-204ENST00000380756 HDGFP51858 240 aaKnown RBP15.96■□□□□ 0.15
DNMT3A-204ENST00000380756 DAPK1P53355 1430 aa15.96■□□□□ 0.14
DNMT3A-204ENST00000380756 KCNJ4P48050 445 aa15.95■□□□□ 0.14
DNMT3A-204ENST00000380756 MSH5O43196 834 aa15.95■□□□□ 0.14
DNMT3A-204ENST00000380756 NFKBIBQ15653 356 aa15.95■□□□□ 0.14
DNMT3A-204ENST00000380756 SUPT6HQ7KZ85 1726 aaKnown RBP15.95■□□□□ 0.14
DNMT3A-204ENST00000380756 PRG4Q92954 1404 aaPredicted RBP15.94■□□□□ 0.14
DNMT3A-204ENST00000380756 TROQ12816 1431 aaPredicted RBP15.94■□□□□ 0.14
DNMT3A-204ENST00000380756 BACH2Q9BYV9 841 aa15.94■□□□□ 0.14
DNMT3A-204ENST00000380756 ANKRD30BQ9BXX2 1392 aa15.93■□□□□ 0.14
DNMT3A-204ENST00000380756 ABCA10Q8WWZ4 1543 aa15.93■□□□□ 0.14
DNMT3A-204ENST00000380756 PPP2R1AP30153 589 aa15.93■□□□□ 0.14
DNMT3A-204ENST00000380756 EVC2Q86UK5 1308 aa15.93■□□□□ 0.14
DNMT3A-204ENST00000380756 FOXD4L1Q9NU39 408 aa15.92■□□□□ 0.14
DNMT3A-204ENST00000380756 ROCK1Q13464 1354 aa15.92■□□□□ 0.14
DNMT3A-204ENST00000380756 ZRSR1Q15695 479 aaKnown RBP15.92■□□□□ 0.14
DNMT3A-204ENST00000380756 RUNDC1Q96C34 613 aa15.92■□□□□ 0.14
DNMT3A-204ENST00000380756 PANK1Q8TE04 598 aa15.91■□□□□ 0.14
DNMT3A-204ENST00000380756 DNMBPQ6XZF7 1577 aa15.91■□□□□ 0.14
DNMT3A-204ENST00000380756 MAPKBP1O60336 1514 aa15.91■□□□□ 0.14
DNMT3A-204ENST00000380756 EPRSP07814 1512 aaKnown RBP15.91■□□□□ 0.14
DNMT3A-204ENST00000380756 C9orf84Q5VXU9 1444 aa15.91■□□□□ 0.14
DNMT3A-204ENST00000380756 VGFO15240 615 aaPredicted RBP15.91■□□□□ 0.14
DNMT3A-204ENST00000380756 ELL2O00472 640 aaPredicted RBP15.91■□□□□ 0.14
DNMT3A-204ENST00000380756 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.91■□□□□ 0.14
DNMT3A-204ENST00000380756 DZIP1LQ8IYY4 767 aaKnown RBP15.91■□□□□ 0.14
DNMT3A-204ENST00000380756 LMOD2Q6P5Q4 547 aa15.9■□□□□ 0.14
DNMT3A-204ENST00000380756 DDX11L8A8MPP1 907 aa15.9■□□□□ 0.14
DNMT3A-204ENST00000380756 LMOD3Q0VAK6 560 aa15.9■□□□□ 0.14
DNMT3A-204ENST00000380756 DDX19BQ9UMR2 479 aa15.9■□□□□ 0.14
DNMT3A-204ENST00000380756 HECW1Q76N89 1606 aa15.89■□□□□ 0.13
DNMT3A-204ENST00000380756 ANKRD45Q5TZF3 282 aa15.89■□□□□ 0.13
DNMT3A-204ENST00000380756 FGD1P98174 961 aa15.88■□□□□ 0.13
DNMT3A-204ENST00000380756 CDK13Q14004 1512 aaKnown RBP15.88■□□□□ 0.13
DNMT3A-204ENST00000380756 HMMRO75330 724 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms