RNA–Protein interactions for RNA: ENST00000380691.2

MSL3-204, Transcript of MSL complex subunit 3, humanhuman

TSL 3

Gene MSL3, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-204ENST00000380691 ABCC1P33527 1531 aa9.82□□□□□ -0.84
MSL3-204ENST00000380691 MYO5CQ9NQX4 1742 aa9.82□□□□□ -0.84
MSL3-204ENST00000380691 VWDEQ8N2E2 1590 aa9.82□□□□□ -0.84
MSL3-204ENST00000380691 KIF14Q15058 1648 aa9.82□□□□□ -0.84
MSL3-204ENST00000380691 CLIP1P30622 1438 aa9.82□□□□□ -0.84
MSL3-204ENST00000380691 TROQ12816 1431 aaPredicted RBP9.82□□□□□ -0.84
MSL3-204ENST00000380691 RANGAP1P46060 587 aaPredicted RBP9.81□□□□□ -0.84
MSL3-204ENST00000380691 RNF17Q9BXT8 1623 aaKnown RBP9.8□□□□□ -0.84
MSL3-204ENST00000380691 NPHP4O75161 1426 aaPredicted RBP9.79□□□□□ -0.84
MSL3-204ENST00000380691 DNMT1P26358 1616 aaKnown RBP9.78□□□□□ -0.84
MSL3-204ENST00000380691 LRRC7Q96NW7 1537 aa9.78□□□□□ -0.84
MSL3-204ENST00000380691 ANKLE2Q86XL3 938 aa9.78□□□□□ -0.84
MSL3-204ENST00000380691 MED14O60244 1454 aa9.78□□□□□ -0.84
MSL3-204ENST00000380691 SYNMO15061 1565 aa9.77□□□□□ -0.85
MSL3-204ENST00000380691 TNRQ92752 1358 aa9.76□□□□□ -0.85
MSL3-204ENST00000380691 PLXNC1O60486 1568 aa9.76□□□□□ -0.85
MSL3-204ENST00000380691 KIDINS220Q9ULH0 1771 aa9.76□□□□□ -0.85
MSL3-204ENST00000380691 UPF1Q92900 1129 aaKnown RBP eCLIP9.76□□□□□ -0.85
MSL3-204ENST00000380691 SPAG9O60271 1321 aaKnown RBP9.76□□□□□ -0.85
MSL3-204ENST00000380691 FMN1Q68DA7 1419 aa9.75□□□□□ -0.85
MSL3-204ENST00000380691 ATXN8OSP0DMR3 200 aa9.75□□□□□ -0.85
MSL3-204ENST00000380691 SAMD9LQ8IVG5 1584 aa9.75□□□□□ -0.85
MSL3-204ENST00000380691 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.75□□□□□ -0.85
MSL3-204ENST00000380691 FAM135BQ49AJ0 1406 aa9.74□□□□□ -0.85
MSL3-204ENST00000380691 CLTCQ00610 1675 aaKnown RBP9.74□□□□□ -0.85
MSL3-204ENST00000380691 A2MP01023 1474 aa9.74□□□□□ -0.85
MSL3-204ENST00000380691 GGT6Q6P531 493 aa9.74□□□□□ -0.85
MSL3-204ENST00000380691 THEMISQ8N1K5 641 aaPredicted RBP9.74□□□□□ -0.85
MSL3-204ENST00000380691 ITSN2Q9NZM3 1697 aa9.74□□□□□ -0.85
MSL3-204ENST00000380691 POLR1AO95602 1720 aaPredicted RBP9.73□□□□□ -0.85
MSL3-204ENST00000380691 SUPT6HQ7KZ85 1726 aaKnown RBP9.73□□□□□ -0.85
MSL3-204ENST00000380691 ATP1B4Q9UN42 357 aaPredicted RBP9.73□□□□□ -0.85
MSL3-204ENST00000380691 FAM135AQ9P2D6 1515 aa9.72□□□□□ -0.85
MSL3-204ENST00000380691 DEPDC5O75140 1603 aa9.72□□□□□ -0.85
MSL3-204ENST00000380691 PREX2Q70Z35 1606 aa9.72□□□□□ -0.85
MSL3-204ENST00000380691 SETD1AO15047 1707 aaKnown RBP9.72□□□□□ -0.85
MSL3-204ENST00000380691 NLRP1Q9C000 1473 aa9.72□□□□□ -0.85
MSL3-204ENST00000380691 ATP7AQ04656 1500 aa9.72□□□□□ -0.85
MSL3-204ENST00000380691 PZPP20742 1482 aa9.71□□□□□ -0.86
MSL3-204ENST00000380691 POLA2Q14181 598 aa9.69□□□□□ -0.86
MSL3-204ENST00000380691 FBXO31Q5XUX0 539 aaPredicted RBP9.69□□□□□ -0.86
MSL3-204ENST00000380691 SYCP2Q9BX26 1530 aa9.69□□□□□ -0.86
MSL3-204ENST00000380691 UGGT1Q9NYU2 1555 aa9.69□□□□□ -0.86
MSL3-204ENST00000380691 INO80Q9ULG1 1556 aaPredicted RBP9.68□□□□□ -0.86
MSL3-204ENST00000380691 MIA2Q96PC5 1412 aa9.68□□□□□ -0.86
MSL3-204ENST00000380691 KIAA1107Q9UPP5 1409 aa9.68□□□□□ -0.86
MSL3-204ENST00000380691 CDC42BPBQ9Y5S2 1711 aa9.68□□□□□ -0.86
MSL3-204ENST00000380691 IQGAP1P46940 1657 aa9.67□□□□□ -0.86
MSL3-204ENST00000380691 KDM5DQ9BY66 1539 aa9.67□□□□□ -0.86
MSL3-204ENST00000380691 PLEKHH2Q8IVE3 1493 aa9.67□□□□□ -0.86
MSL3-204ENST00000380691 SRCAPQ6ZRS2 3230 aa9.67□□□□□ -0.86
MSL3-204ENST00000380691 EEA1Q15075 1411 aa9.66□□□□□ -0.86
MSL3-204ENST00000380691 JCADQ9P266 1359 aa9.66□□□□□ -0.86
MSL3-204ENST00000380691 ZNF772Q68DY9 489 aaPredicted RBP9.66□□□□□ -0.86
MSL3-204ENST00000380691 ZNF777Q9ULD5 760 aaPredicted RBP9.66□□□□□ -0.86
MSL3-204ENST00000380691 ATF5Q9Y2D1 282 aaPredicted RBP9.66□□□□□ -0.86
MSL3-204ENST00000380691 LRRC9Q6ZRR7 1453 aa9.66□□□□□ -0.86
MSL3-204ENST00000380691 TRIM52Q96A61 297 aa9.65□□□□□ -0.86
MSL3-204ENST00000380691 HNRNPMP52272 730 aaKnown RBP eCLIP9.64□□□□□ -0.87
MSL3-204ENST00000380691 CDK12Q9NYV4 1490 aaPredicted RBP9.64□□□□□ -0.87
MSL3-204ENST00000380691 CCDC18Q5T9S5 1454 aa9.63□□□□□ -0.87
MSL3-204ENST00000380691 STRCP1A6NGW2 1772 aa9.63□□□□□ -0.87
MSL3-204ENST00000380691 SCAF11Q99590 1463 aaKnown RBP9.62□□□□□ -0.87
MSL3-204ENST00000380691 TMEM94Q12767 1356 aa9.62□□□□□ -0.87
MSL3-204ENST00000380691 DHX29Q7Z478 1369 aaKnown RBP9.62□□□□□ -0.87
MSL3-204ENST00000380691 GPATCH8Q9UKJ3 1502 aaKnown RBP9.61□□□□□ -0.87
MSL3-204ENST00000380691 SPATA31A6Q5VVP1 1343 aa9.61□□□□□ -0.87
MSL3-204ENST00000380691 WASHC2CQ9Y4E1 1318 aa9.61□□□□□ -0.87
MSL3-204ENST00000380691 ARHGAP35Q9NRY4 1499 aa9.61□□□□□ -0.87
MSL3-204ENST00000380691 RXRBP28702 533 aa9.61□□□□□ -0.87
MSL3-204ENST00000380691 MEX3CQ5U5Q3 659 aaKnown RBP9.61□□□□□ -0.87
MSL3-204ENST00000380691 RTEL1-TNFRSF6BF6WH68 1400 aa9.6□□□□□ -0.87
MSL3-204ENST00000380691 LRP6O75581 1613 aa9.6□□□□□ -0.87
MSL3-204ENST00000380691 FGD6Q6ZV73 1430 aa9.59□□□□□ -0.87
MSL3-204ENST00000380691 ROBO1Q9Y6N7 1651 aa9.59□□□□□ -0.87
MSL3-204ENST00000380691 KIF3BO15066 747 aa9.59□□□□□ -0.87
MSL3-204ENST00000380691 CFDP1Q9UEE9 299 aaPredicted RBP9.59□□□□□ -0.87
MSL3-204ENST00000380691 ZC3H13Q5T200 1668 aaKnown RBP9.58□□□□□ -0.88
MSL3-204ENST00000380691 ADGBQ8N7X0 1667 aa9.58□□□□□ -0.88
MSL3-204ENST00000380691 MAP3K1Q13233 1512 aa9.58□□□□□ -0.88
MSL3-204ENST00000380691 CASKIN1Q8WXD9 1431 aa9.57□□□□□ -0.88
MSL3-204ENST00000380691 ARHGAP23Q9P227 1491 aa9.57□□□□□ -0.88
MSL3-204ENST00000380691 CDC42BPAQ5VT25 1732 aa9.56□□□□□ -0.88
MSL3-204ENST00000380691 CCNB3Q8WWL7 1395 aa9.56□□□□□ -0.88
MSL3-204ENST00000380691 ZRANB1Q9UGI0 708 aa9.56□□□□□ -0.88
MSL3-204ENST00000380691 SLIT1O75093 1534 aa9.56□□□□□ -0.88
MSL3-204ENST00000380691 ERVK-7P63135 1459 aa9.55□□□□□ -0.88
MSL3-204ENST00000380691 MSH6P52701 1360 aa9.55□□□□□ -0.88
MSL3-204ENST00000380691 KCNA6P17658 529 aa9.55□□□□□ -0.88
MSL3-204ENST00000380691 LTKP29376 864 aa9.55□□□□□ -0.88
MSL3-204ENST00000380691 TXNDC2Q86VQ3 553 aa9.55□□□□□ -0.88
MSL3-204ENST00000380691 RGS12O14924 1447 aa9.55□□□□□ -0.88
MSL3-204ENST00000380691 NKTRP30414 1462 aaKnown RBP9.54□□□□□ -0.88
MSL3-204ENST00000380691 NCOA2Q15596 1464 aa9.54□□□□□ -0.88
MSL3-204ENST00000380691 MBD5Q9P267 1494 aa9.54□□□□□ -0.88
MSL3-204ENST00000380691 SLAIN2Q9P270 581 aa9.54□□□□□ -0.88
MSL3-204ENST00000380691 EID1Q9Y6B2 187 aa9.54□□□□□ -0.88
MSL3-204ENST00000380691 PRDM15P57071 1507 aaPredicted RBP9.54□□□□□ -0.88
MSL3-204ENST00000380691 PROSER2Q86WR7 435 aaPredicted RBP9.53□□□□□ -0.88
MSL3-204ENST00000380691 COL16A1Q07092 1604 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms