RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 MAGI2Q86UL8 1455 aa17.49■□□□□ 0.39
VPS16-202ENST00000380445 TRAPPC8Q9Y2L5 1435 aa17.48■□□□□ 0.39
VPS16-202ENST00000380445 KIF7Q2M1P5 1343 aa17.48■□□□□ 0.39
VPS16-202ENST00000380445 SPAG9O60271 1321 aaKnown RBP17.48■□□□□ 0.39
VPS16-202ENST00000380445 DCAF11Q8TEB1 546 aa17.46■□□□□ 0.39
VPS16-202ENST00000380445 KDM5CP41229 1560 aa17.46■□□□□ 0.39
VPS16-202ENST00000380445 ABCA9Q8IUA7 1624 aa17.46■□□□□ 0.39
VPS16-202ENST00000380445 CARD11Q9BXL7 1154 aa17.45■□□□□ 0.38
VPS16-202ENST00000380445 ATP10AO60312 1499 aa17.44■□□□□ 0.38
VPS16-202ENST00000380445 FANCAO15360 1455 aa17.44■□□□□ 0.38
VPS16-202ENST00000380445 KDM2AQ9Y2K7 1162 aa17.44■□□□□ 0.38
VPS16-202ENST00000380445 RIMBP3CA6NJZ7 1639 aa17.43■□□□□ 0.38
VPS16-202ENST00000380445 RIMBP3BA6NNM3 1639 aa17.43■□□□□ 0.38
VPS16-202ENST00000380445 RIMBP3Q9UFD9 1639 aa17.43■□□□□ 0.38
VPS16-202ENST00000380445 NPM1P06748 294 aaKnown RBP eCLIP17.42■□□□□ 0.38
VPS16-202ENST00000380445 ASXL2Q76L83 1435 aa17.42■□□□□ 0.38
VPS16-202ENST00000380445 PRKRIP1Q9H875 184 aaPredicted RBP17.42■□□□□ 0.38
VPS16-202ENST00000380445 ZFYVE16Q7Z3T8 1539 aa17.42■□□□□ 0.38
VPS16-202ENST00000380445 PLA2R1Q13018 1463 aa17.42■□□□□ 0.38
VPS16-202ENST00000380445 AFAP1Q8N556 730 aa17.41■□□□□ 0.38
VPS16-202ENST00000380445 ROCK2O75116 1388 aaKnown RBP17.4■□□□□ 0.38
VPS16-202ENST00000380445 SUPT16HQ9Y5B9 1047 aaKnown RBP17.4■□□□□ 0.38
VPS16-202ENST00000380445 ADGRL1O94910 1474 aa17.38■□□□□ 0.37
VPS16-202ENST00000380445 BCORL1Q5H9F3 1711 aa17.38■□□□□ 0.37
VPS16-202ENST00000380445 PRAG1Q86YV5 1406 aa17.38■□□□□ 0.37
VPS16-202ENST00000380445 ATP7AQ04656 1500 aa17.37■□□□□ 0.37
VPS16-202ENST00000380445 INO80Q9ULG1 1556 aaPredicted RBP17.36■□□□□ 0.37
VPS16-202ENST00000380445 SCAPERQ9BY12 1400 aa17.36■□□□□ 0.37
VPS16-202ENST00000380445 RGL3Q3MIN7 710 aa17.36■□□□□ 0.37
VPS16-202ENST00000380445 CYB5RLQ6IPT4 315 aa17.35■□□□□ 0.37
VPS16-202ENST00000380445 KANK1Q14678 1352 aa17.35■□□□□ 0.37
VPS16-202ENST00000380445 TRPM1Q7Z4N2 1603 aa17.35■□□□□ 0.37
VPS16-202ENST00000380445 A2MP01023 1474 aa17.34■□□□□ 0.37
VPS16-202ENST00000380445 DEPDC5O75140 1603 aa17.34■□□□□ 0.37
VPS16-202ENST00000380445 EIF2AK4Q9P2K8 1649 aaKnown RBP17.34■□□□□ 0.37
VPS16-202ENST00000380445 ST20-MTHFSA0A0A6YYL1 179 aa17.33■□□□□ 0.36
VPS16-202ENST00000380445 MYT1LQ9UL68 1186 aa17.33■□□□□ 0.36
VPS16-202ENST00000380445 GPRASP1Q5JY77 1395 aa17.32■□□□□ 0.36
VPS16-202ENST00000380445 HNRNPUQ00839 825 aaKnown RBP eCLIP17.32■□□□□ 0.36
VPS16-202ENST00000380445 POLR3GLQ9BT43 218 aa17.32■□□□□ 0.36
VPS16-202ENST00000380445 STAC3Q96MF2 364 aa17.31■□□□□ 0.36
VPS16-202ENST00000380445 ANP32EQ9BTT0 268 aa17.31■□□□□ 0.36
VPS16-202ENST00000380445 LAMC1P11047 1609 aa17.31■□□□□ 0.36
VPS16-202ENST00000380445 DHX29Q7Z478 1369 aaKnown RBP17.31■□□□□ 0.36
VPS16-202ENST00000380445 E9PCH4 1651 aa17.31■□□□□ 0.36
VPS16-202ENST00000380445 MRS2Q9HD23 443 aa17.3■□□□□ 0.36
VPS16-202ENST00000380445 CFAP74Q9C0B2 1584 aa17.3■□□□□ 0.36
VPS16-202ENST00000380445 TET3O43151 1660 aa17.29■□□□□ 0.36
VPS16-202ENST00000380445 TRPM2O94759 1503 aa17.29■□□□□ 0.36
VPS16-202ENST00000380445 ZNF518AQ6AHZ1 1483 aa17.29■□□□□ 0.36
VPS16-202ENST00000380445 NEFLP07196 543 aa17.28■□□□□ 0.36
VPS16-202ENST00000380445 PTPRTO14522 1441 aa17.28■□□□□ 0.36
VPS16-202ENST00000380445 VWDEQ8N2E2 1590 aa17.27■□□□□ 0.36
VPS16-202ENST00000380445 KIF3BO15066 747 aa17.27■□□□□ 0.36
VPS16-202ENST00000380445 CD109Q6YHK3 1445 aa17.27■□□□□ 0.35
VPS16-202ENST00000380445 SPHKAPQ2M3C7 1700 aa17.26■□□□□ 0.35
VPS16-202ENST00000380445 PRDM15P57071 1507 aaPredicted RBP17.26■□□□□ 0.35
VPS16-202ENST00000380445 CCDC184Q52MB2 194 aa17.25■□□□□ 0.35
VPS16-202ENST00000380445 NBPF1Q3BBV0 1214 aa17.24■□□□□ 0.35
VPS16-202ENST00000380445 KTN1Q86UP2 1357 aaKnown RBP17.24■□□□□ 0.35
VPS16-202ENST00000380445 CEP152O94986 1710 aa17.24■□□□□ 0.35
VPS16-202ENST00000380445 KIDINS220Q9ULH0 1771 aa17.23■□□□□ 0.35
VPS16-202ENST00000380445 FAM9BQ8IZU0 186 aa17.23■□□□□ 0.35
VPS16-202ENST00000380445 FKBP8Q14318 412 aa17.21■□□□□ 0.35
VPS16-202ENST00000380445 NEURL4Q96JN8 1562 aa17.21■□□□□ 0.35
VPS16-202ENST00000380445 POGZQ7Z3K3 1410 aa17.2■□□□□ 0.34
VPS16-202ENST00000380445 MLH3Q9UHC1 1453 aa17.19■□□□□ 0.34
VPS16-202ENST00000380445 MROH1Q8NDA8 1641 aa17.19■□□□□ 0.34
VPS16-202ENST00000380445 RNF17Q9BXT8 1623 aaKnown RBP17.19■□□□□ 0.34
VPS16-202ENST00000380445 CLTCL1P53675 1640 aa17.19■□□□□ 0.34
VPS16-202ENST00000380445 RALBP1Q15311 655 aa17.19■□□□□ 0.34
VPS16-202ENST00000380445 ZBED9Q6R2W3 1325 aa17.18■□□□□ 0.34
VPS16-202ENST00000380445 MADDQ8WXG6 1647 aa17.17■□□□□ 0.34
VPS16-202ENST00000380445 NEO1Q92859 1461 aa17.17■□□□□ 0.34
VPS16-202ENST00000380445 COL17A1Q9UMD9 1497 aaPredicted RBP17.17■□□□□ 0.34
VPS16-202ENST00000380445 LMTK2Q8IWU2 1503 aa17.17■□□□□ 0.34
VPS16-202ENST00000380445 TMF1P82094 1093 aa17.17■□□□□ 0.34
VPS16-202ENST00000380445 EFCAB6Q5THR3 1501 aa17.16■□□□□ 0.34
VPS16-202ENST00000380445 TESK2Q96S53 571 aa17.16■□□□□ 0.34
VPS16-202ENST00000380445 HECW2Q9P2P5 1572 aa17.15■□□□□ 0.34
VPS16-202ENST00000380445 TMC1Q8TDI8 760 aa17.14■□□□□ 0.33
VPS16-202ENST00000380445 WASHC2CQ9Y4E1 1318 aa17.14■□□□□ 0.33
VPS16-202ENST00000380445 MYBBP1AQ9BQG0 1328 aaKnown RBP17.13■□□□□ 0.33
VPS16-202ENST00000380445 BRD4O60885 1362 aaPredicted RBP17.12■□□□□ 0.33
VPS16-202ENST00000380445 CNGB1Q14028 1251 aaPredicted RBP17.12■□□□□ 0.33
VPS16-202ENST00000380445 KIAA1210Q9ULL0 1709 aa17.11■□□□□ 0.33
VPS16-202ENST00000380445 KIF1BO60333 1816 aa17.11■□□□□ 0.33
VPS16-202ENST00000380445 SCAF11Q99590 1463 aaKnown RBP17.11■□□□□ 0.33
VPS16-202ENST00000380445 DISP3Q9P2K9 1392 aa17.11■□□□□ 0.33
VPS16-202ENST00000380445 IQGAP1P46940 1657 aa17.1■□□□□ 0.33
VPS16-202ENST00000380445 PPRC1Q5VV67 1664 aaKnown RBP17.1■□□□□ 0.33
VPS16-202ENST00000380445 CDCA8Q53HL2 280 aa17.1■□□□□ 0.33
VPS16-202ENST00000380445 SLC24A1O60721 1099 aa17.1■□□□□ 0.33
VPS16-202ENST00000380445 BCANQ96GW7 911 aa17.1■□□□□ 0.33
VPS16-202ENST00000380445 MYOM2P54296 1465 aa17.09■□□□□ 0.33
VPS16-202ENST00000380445 EIF3AQ14152 1382 aaKnown RBP17.09■□□□□ 0.33
VPS16-202ENST00000380445 ERICH6Q7L0X2 663 aa17.09■□□□□ 0.33
VPS16-202ENST00000380445 PNISRQ8TF01 805 aaKnown RBP17.09■□□□□ 0.33
VPS16-202ENST00000380445 FRMPD1Q5SYB0 1578 aa17.08■□□□□ 0.32
VPS16-202ENST00000380445 PER1O15534 1290 aaPredicted RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms