RNA–Protein interactions for RNA: ENST00000380324.7

USP3-202, Transcript of ubiquitin specific peptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP3, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-202ENST00000380324 KDM2AQ9Y2K7 1162 aa16.82■□□□□ 0.28
USP3-202ENST00000380324 SPATA31E1Q6ZUB1 1445 aa16.82■□□□□ 0.28
USP3-202ENST00000380324 PLA2R1Q13018 1463 aa16.82■□□□□ 0.28
USP3-202ENST00000380324 C11orf95C9JLR9 678 aaPredicted RBP16.81■□□□□ 0.28
USP3-202ENST00000380324 DCAF11Q8TEB1 546 aa16.81■□□□□ 0.28
USP3-202ENST00000380324 USP47Q96K76 1375 aa16.81■□□□□ 0.28
USP3-202ENST00000380324 UHRF1BP1Q6BDS2 1440 aa16.8■□□□□ 0.28
USP3-202ENST00000380324 RALGAPBQ86X10 1494 aa16.8■□□□□ 0.28
USP3-202ENST00000380324 KDM5CP41229 1560 aa16.79■□□□□ 0.28
USP3-202ENST00000380324 DEPDC5O75140 1603 aa16.79■□□□□ 0.28
USP3-202ENST00000380324 CCDC7Q96M83 1385 aa16.79■□□□□ 0.28
USP3-202ENST00000380324 CD109Q6YHK3 1445 aa16.79■□□□□ 0.28
USP3-202ENST00000380324 E9PCH4 1651 aa16.79■□□□□ 0.28
USP3-202ENST00000380324 CFAP74Q9C0B2 1584 aa16.78■□□□□ 0.28
USP3-202ENST00000380324 KIDINS220Q9ULH0 1771 aa16.78■□□□□ 0.28
USP3-202ENST00000380324 RGL3Q3MIN7 710 aa16.78■□□□□ 0.28
USP3-202ENST00000380324 CNTLNQ9NXG0 1405 aa16.77■□□□□ 0.28
USP3-202ENST00000380324 ZNF518AQ6AHZ1 1483 aa16.77■□□□□ 0.27
USP3-202ENST00000380324 BCORL1Q5H9F3 1711 aa16.76■□□□□ 0.27
USP3-202ENST00000380324 KIF7Q2M1P5 1343 aa16.75■□□□□ 0.27
USP3-202ENST00000380324 A2MP01023 1474 aa16.74■□□□□ 0.27
USP3-202ENST00000380324 CARD11Q9BXL7 1154 aa16.74■□□□□ 0.27
USP3-202ENST00000380324 EIF2AK4Q9P2K8 1649 aaKnown RBP16.74■□□□□ 0.27
USP3-202ENST00000380324 SPHKAPQ2M3C7 1700 aa16.74■□□□□ 0.27
USP3-202ENST00000380324 CCER2I3L3R5 266 aa16.73■□□□□ 0.27
USP3-202ENST00000380324 KIF3BO15066 747 aa16.73■□□□□ 0.27
USP3-202ENST00000380324 TET3O43151 1660 aa16.73■□□□□ 0.27
USP3-202ENST00000380324 ATP10AO60312 1499 aa16.73■□□□□ 0.27
USP3-202ENST00000380324 TRPM1Q7Z4N2 1603 aa16.72■□□□□ 0.27
USP3-202ENST00000380324 CYB5RLQ6IPT4 315 aa16.72■□□□□ 0.27
USP3-202ENST00000380324 ROCK2O75116 1388 aaKnown RBP16.72■□□□□ 0.27
USP3-202ENST00000380324 POGZQ7Z3K3 1410 aa16.72■□□□□ 0.27
USP3-202ENST00000380324 PRAG1Q86YV5 1406 aa16.72■□□□□ 0.27
USP3-202ENST00000380324 PRDM15P57071 1507 aaPredicted RBP16.72■□□□□ 0.27
USP3-202ENST00000380324 RIMBP3CA6NJZ7 1639 aa16.71■□□□□ 0.27
USP3-202ENST00000380324 RIMBP3BA6NNM3 1639 aa16.71■□□□□ 0.27
USP3-202ENST00000380324 MROH1Q8NDA8 1641 aa16.71■□□□□ 0.27
USP3-202ENST00000380324 RIMBP3Q9UFD9 1639 aa16.71■□□□□ 0.27
USP3-202ENST00000380324 POLR3GLQ9BT43 218 aa16.71■□□□□ 0.27
USP3-202ENST00000380324 KANK1Q14678 1352 aa16.7■□□□□ 0.26
USP3-202ENST00000380324 DHX29Q7Z478 1369 aaKnown RBP16.7■□□□□ 0.26
USP3-202ENST00000380324 HECW2Q9P2P5 1572 aa16.7■□□□□ 0.26
USP3-202ENST00000380324 TRPM2O94759 1503 aa16.69■□□□□ 0.26
USP3-202ENST00000380324 VWDEQ8N2E2 1590 aa16.69■□□□□ 0.26
USP3-202ENST00000380324 CEP152O94986 1710 aa16.68■□□□□ 0.26
USP3-202ENST00000380324 CLTCL1P53675 1640 aa16.68■□□□□ 0.26
USP3-202ENST00000380324 ABCA6Q8N139 1617 aa16.66■□□□□ 0.26
USP3-202ENST00000380324 MAP3K4Q9Y6R4 1608 aa16.65■□□□□ 0.26
USP3-202ENST00000380324 ST20-MTHFSA0A0A6YYL1 179 aa16.64■□□□□ 0.25
USP3-202ENST00000380324 NEO1Q92859 1461 aa16.64■□□□□ 0.25
USP3-202ENST00000380324 FRMPD1Q5SYB0 1578 aa16.64■□□□□ 0.25
USP3-202ENST00000380324 PPRC1Q5VV67 1664 aaKnown RBP16.64■□□□□ 0.25
USP3-202ENST00000380324 EFCAB6Q5THR3 1501 aa16.63■□□□□ 0.25
USP3-202ENST00000380324 MLH3Q9UHC1 1453 aa16.63■□□□□ 0.25
USP3-202ENST00000380324 NBPF1Q3BBV0 1214 aa16.63■□□□□ 0.25
USP3-202ENST00000380324 RNF17Q9BXT8 1623 aaKnown RBP16.63■□□□□ 0.25
USP3-202ENST00000380324 PTPRTO14522 1441 aa16.63■□□□□ 0.25
USP3-202ENST00000380324 RAPGEF3O95398 923 aa16.63■□□□□ 0.25
USP3-202ENST00000380324 UGGT1Q9NYU2 1555 aa16.62■□□□□ 0.25
USP3-202ENST00000380324 CFAP65Q6ZU64 1925 aaKnown RBP16.6■□□□□ 0.25
USP3-202ENST00000380324 RICTORQ6R327 1708 aa16.6■□□□□ 0.25
USP3-202ENST00000380324 MADDQ8WXG6 1647 aa16.6■□□□□ 0.25
USP3-202ENST00000380324 PRKRIP1Q9H875 184 aaPredicted RBP16.6■□□□□ 0.25
USP3-202ENST00000380324 LAMC1P11047 1609 aa16.6■□□□□ 0.25
USP3-202ENST00000380324 CNGB1Q14028 1251 aaPredicted RBP16.59■□□□□ 0.25
USP3-202ENST00000380324 GPRASP1Q5JY77 1395 aa16.58■□□□□ 0.25
USP3-202ENST00000380324 TSPOAP1O95153 1857 aa16.58■□□□□ 0.24
USP3-202ENST00000380324 GGT6Q6P531 493 aa16.57■□□□□ 0.24
USP3-202ENST00000380324 DIP2CQ9Y2E4 1556 aa16.57■□□□□ 0.24
USP3-202ENST00000380324 KIF1BO60333 1816 aa16.57■□□□□ 0.24
USP3-202ENST00000380324 ARID4BQ4LE39 1312 aaPredicted RBP16.57■□□□□ 0.24
USP3-202ENST00000380324 DIP2BQ9P265 1576 aa16.56■□□□□ 0.24
USP3-202ENST00000380324 CCDC184Q52MB2 194 aa16.56■□□□□ 0.24
USP3-202ENST00000380324 GLI2P10070 1586 aa16.56■□□□□ 0.24
USP3-202ENST00000380324 LMTK2Q8IWU2 1503 aa16.56■□□□□ 0.24
USP3-202ENST00000380324 MROH2AA6NES4 1674 aa16.55■□□□□ 0.24
USP3-202ENST00000380324 FAM69CQ0P6D2 419 aa16.53■□□□□ 0.24
USP3-202ENST00000380324 MRS2Q9HD23 443 aa16.52■□□□□ 0.24
USP3-202ENST00000380324 NPATQ14207 1427 aa16.52■□□□□ 0.24
USP3-202ENST00000380324 YEATS2Q9ULM3 1422 aa16.52■□□□□ 0.23
USP3-202ENST00000380324 ABCC3O15438 1527 aa16.51■□□□□ 0.23
USP3-202ENST00000380324 CAMSAP1Q5T5Y3 1602 aa16.51■□□□□ 0.23
USP3-202ENST00000380324 HNRNPUQ00839 825 aaKnown RBP eCLIP16.51■□□□□ 0.23
USP3-202ENST00000380324 COL17A1Q9UMD9 1497 aaPredicted RBP16.51■□□□□ 0.23
USP3-202ENST00000380324 IQGAP1P46940 1657 aa16.51■□□□□ 0.23
USP3-202ENST00000380324 WASHC2CQ9Y4E1 1318 aa16.5■□□□□ 0.23
USP3-202ENST00000380324 DISP3Q9P2K9 1392 aa16.5■□□□□ 0.23
USP3-202ENST00000380324 IFT172Q9UG01 1749 aa16.49■□□□□ 0.23
USP3-202ENST00000380324 NEURL4Q96JN8 1562 aa16.49■□□□□ 0.23
USP3-202ENST00000380324 FAM9BQ8IZU0 186 aa16.48■□□□□ 0.23
USP3-202ENST00000380324 TESK2Q96S53 571 aa16.47■□□□□ 0.23
USP3-202ENST00000380324 SIGLEC1Q9BZZ2 1709 aa16.47■□□□□ 0.23
USP3-202ENST00000380324 CHGAP10645 457 aaKnown RBP16.47■□□□□ 0.23
USP3-202ENST00000380324 ADGRB3O60242 1522 aa16.46■□□□□ 0.23
USP3-202ENST00000380324 MYOM2P54296 1465 aa16.45■□□□□ 0.22
USP3-202ENST00000380324 KIAA1210Q9ULL0 1709 aa16.45■□□□□ 0.22
USP3-202ENST00000380324 ZMYM4Q5VZL5 1548 aa16.44■□□□□ 0.22
USP3-202ENST00000380324 SCAF11Q99590 1463 aaKnown RBP16.43■□□□□ 0.22
USP3-202ENST00000380324 ZC3H13Q5T200 1668 aaKnown RBP16.43■□□□□ 0.22
USP3-202ENST00000380324 ADGRF5Q8IZF2 1346 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms