RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 TRAPPC8Q9Y2L5 1435 aa11.45□□□□□ -0.58
CDKL5-202ENST00000379996 CLSPNQ9HAW4 1339 aa11.45□□□□□ -0.58
CDKL5-202ENST00000379996 SCAPERQ9BY12 1400 aa11.45□□□□□ -0.58
CDKL5-202ENST00000379996 DIEXFQ68CQ4 756 aaKnown RBP11.45□□□□□ -0.58
CDKL5-202ENST00000379996 ZNF644Q9H582 1327 aaPredicted RBP11.45□□□□□ -0.58
CDKL5-202ENST00000379996 NCOA1Q15788 1441 aa11.44□□□□□ -0.58
CDKL5-202ENST00000379996 DUOX2Q9NRD8 1548 aa11.44□□□□□ -0.58
CDKL5-202ENST00000379996 DEPDC5O75140 1603 aa11.44□□□□□ -0.58
CDKL5-202ENST00000379996 PLCB2Q00722 1185 aa11.43□□□□□ -0.58
CDKL5-202ENST00000379996 NAIPQ13075 1403 aa11.43□□□□□ -0.58
CDKL5-202ENST00000379996 KDM5DQ9BY66 1539 aa11.43□□□□□ -0.58
CDKL5-202ENST00000379996 ERBINQ96RT1 1412 aa11.42□□□□□ -0.58
CDKL5-202ENST00000379996 UNC13BO14795 1591 aa11.42□□□□□ -0.58
CDKL5-202ENST00000379996 ZNF316A6NFI3 1004 aaPredicted RBP11.42□□□□□ -0.58
CDKL5-202ENST00000379996 ABCA6Q8N139 1617 aa11.42□□□□□ -0.58
CDKL5-202ENST00000379996 ANKRD30AQ9BXX3 1397 aa11.42□□□□□ -0.58
CDKL5-202ENST00000379996 DIP2CQ9Y2E4 1556 aa11.42□□□□□ -0.58
CDKL5-202ENST00000379996 TRHP20396 242 aaPredicted RBP11.41□□□□□ -0.58
CDKL5-202ENST00000379996 ARHGEF40Q8TER5 1519 aa11.41□□□□□ -0.58
CDKL5-202ENST00000379996 RNF17Q9BXT8 1623 aaKnown RBP11.41□□□□□ -0.58
CDKL5-202ENST00000379996 SPDYE4A6NLX3 237 aa11.41□□□□□ -0.58
CDKL5-202ENST00000379996 FAM50AQ14320 339 aaKnown RBP11.41□□□□□ -0.58
CDKL5-202ENST00000379996 FAM135AQ9P2D6 1515 aa11.4□□□□□ -0.58
CDKL5-202ENST00000379996 NEUROD1Q13562 356 aa11.4□□□□□ -0.58
CDKL5-202ENST00000379996 SETD5Q9C0A6 1442 aa11.4□□□□□ -0.58
CDKL5-202ENST00000379996 KDM6BO15054 1643 aa11.39□□□□□ -0.59
CDKL5-202ENST00000379996 AGLP35573 1532 aa11.39□□□□□ -0.59
CDKL5-202ENST00000379996 HNRNPMP52272 730 aaKnown RBP eCLIP11.38□□□□□ -0.59
CDKL5-202ENST00000379996 ZNF219Q9P2Y4 722 aaPredicted RBP11.38□□□□□ -0.59
CDKL5-202ENST00000379996 COL17A1Q9UMD9 1497 aaPredicted RBP11.37□□□□□ -0.59
CDKL5-202ENST00000379996 VWDEQ8N2E2 1590 aa11.37□□□□□ -0.59
CDKL5-202ENST00000379996 ZNF777Q9ULD5 760 aaPredicted RBP11.37□□□□□ -0.59
CDKL5-202ENST00000379996 TSPY4P0CV99 314 aa11.36□□□□□ -0.59
CDKL5-202ENST00000379996 TSPY10P0CW01 314 aa11.36□□□□□ -0.59
CDKL5-202ENST00000379996 PRDM15P57071 1507 aaPredicted RBP11.36□□□□□ -0.59
CDKL5-202ENST00000379996 IQGAP3Q86VI3 1631 aa11.36□□□□□ -0.59
CDKL5-202ENST00000379996 IFNLR1Q8IU57 520 aaPredicted RBP11.35□□□□□ -0.59
CDKL5-202ENST00000379996 ZC3H13Q5T200 1668 aaKnown RBP11.35□□□□□ -0.59
CDKL5-202ENST00000379996 MROH1Q8NDA8 1641 aa11.35□□□□□ -0.59
CDKL5-202ENST00000379996 MKRN4PQ13434 485 aaPredicted RBP11.35□□□□□ -0.59
CDKL5-202ENST00000379996 KIF15Q9NS87 1388 aa11.35□□□□□ -0.59
CDKL5-202ENST00000379996 SPAG9O60271 1321 aaKnown RBP11.35□□□□□ -0.59
CDKL5-202ENST00000379996 ANKRD50Q9ULJ7 1429 aa11.34□□□□□ -0.59
CDKL5-202ENST00000379996 A2MP01023 1474 aa11.34□□□□□ -0.59
CDKL5-202ENST00000379996 DHX29Q7Z478 1369 aaKnown RBP11.34□□□□□ -0.59
CDKL5-202ENST00000379996 ATP10AO60312 1499 aa11.33□□□□□ -0.6
CDKL5-202ENST00000379996 LMTK2Q8IWU2 1503 aa11.33□□□□□ -0.6
CDKL5-202ENST00000379996 RAB3GAP2Q9H2M9 1393 aa11.33□□□□□ -0.6
CDKL5-202ENST00000379996 VASPP50552 380 aaPredicted RBP11.32□□□□□ -0.6
CDKL5-202ENST00000379996 SAMD1Q6SPF0 538 aaPredicted RBP11.32□□□□□ -0.6
CDKL5-202ENST00000379996 AFAP1Q8N556 730 aa11.31□□□□□ -0.6
CDKL5-202ENST00000379996 SPINK5Q9NQ38 1064 aaPredicted RBP11.31□□□□□ -0.6
CDKL5-202ENST00000379996 SIGLEC1Q9BZZ2 1709 aa11.31□□□□□ -0.6
CDKL5-202ENST00000379996 TET3O43151 1660 aa11.29□□□□□ -0.6
CDKL5-202ENST00000379996 YEATS2Q9ULM3 1422 aa11.29□□□□□ -0.6
CDKL5-202ENST00000379996 CFAP44Q96MT7 982 aa11.28□□□□□ -0.6
CDKL5-202ENST00000379996 PZPP20742 1482 aa11.28□□□□□ -0.6
CDKL5-202ENST00000379996 MROH2AA6NES4 1674 aa11.27□□□□□ -0.61
CDKL5-202ENST00000379996 RAPGEF3O95398 923 aa11.26□□□□□ -0.61
CDKL5-202ENST00000379996 MIER1Q8N108 512 aa11.26□□□□□ -0.61
CDKL5-202ENST00000379996 CHIC2Q9UKJ5 165 aa11.25□□□□□ -0.61
CDKL5-202ENST00000379996 RRP7BPQ9NSQ0 103 aa11.24□□□□□ -0.61
CDKL5-202ENST00000379996 ABCB7O75027 752 aa11.24□□□□□ -0.61
CDKL5-202ENST00000379996 ITGAEP38570 1179 aa11.24□□□□□ -0.61
CDKL5-202ENST00000379996 CAMSAP1Q5T5Y3 1602 aa11.24□□□□□ -0.61
CDKL5-202ENST00000379996 EFCAB6Q5THR3 1501 aa11.24□□□□□ -0.61
CDKL5-202ENST00000379996 NEURL4Q96JN8 1562 aa11.23□□□□□ -0.61
CDKL5-202ENST00000379996 RPRD2Q5VT52 1461 aaKnown RBP11.23□□□□□ -0.61
CDKL5-202ENST00000379996 TPRNQ4KMQ1 711 aa11.23□□□□□ -0.61
CDKL5-202ENST00000379996 ABCC3O15438 1527 aa11.23□□□□□ -0.61
CDKL5-202ENST00000379996 ARHGAP31Q2M1Z3 1444 aa11.22□□□□□ -0.61
CDKL5-202ENST00000379996 E9PCH4 1651 aa11.22□□□□□ -0.61
CDKL5-202ENST00000379996 CEP152O94986 1710 aa11.22□□□□□ -0.61
CDKL5-202ENST00000379996 PKD2Q13563 968 aa11.22□□□□□ -0.61
CDKL5-202ENST00000379996 POLA2Q14181 598 aa11.22□□□□□ -0.61
CDKL5-202ENST00000379996 KLHL34Q8N239 644 aa11.2□□□□□ -0.62
CDKL5-202ENST00000379996 SPHKAPQ2M3C7 1700 aa11.2□□□□□ -0.62
CDKL5-202ENST00000379996 GTF3C3Q9Y5Q9 886 aa11.2□□□□□ -0.62
CDKL5-202ENST00000379996 CENPBP07199 599 aaPredicted RBP11.19□□□□□ -0.62
CDKL5-202ENST00000379996 PELP1Q8IZL8 1130 aaKnown RBP11.19□□□□□ -0.62
CDKL5-202ENST00000379996 ADAMTSL3P82987 1691 aa11.19□□□□□ -0.62
CDKL5-202ENST00000379996 PAXIP1Q6ZW49 1069 aaPredicted RBP11.19□□□□□ -0.62
CDKL5-202ENST00000379996 KANK1Q14678 1352 aa11.18□□□□□ -0.62
CDKL5-202ENST00000379996 PTPRTO14522 1441 aa11.18□□□□□ -0.62
CDKL5-202ENST00000379996 TRPM2O94759 1503 aa11.18□□□□□ -0.62
CDKL5-202ENST00000379996 CNTLNQ9NXG0 1405 aa11.17□□□□□ -0.62
CDKL5-202ENST00000379996 PIK3C2BO00750 1634 aa11.17□□□□□ -0.62
CDKL5-202ENST00000379996 FBXO3Q9UK99 471 aa11.17□□□□□ -0.62
CDKL5-202ENST00000379996 CLTCQ00610 1675 aaKnown RBP11.17□□□□□ -0.62
CDKL5-202ENST00000379996 KDM2AQ9Y2K7 1162 aa11.16□□□□□ -0.62
CDKL5-202ENST00000379996 FER1L4A9Z1Z3 1794 aa11.16□□□□□ -0.62
CDKL5-202ENST00000379996 TAOK2Q9UL54 1235 aa11.16□□□□□ -0.62
CDKL5-202ENST00000379996 NUP155O75694 1391 aa11.16□□□□□ -0.62
CDKL5-202ENST00000379996 KDM5AP29375 1690 aaKnown RBP11.16□□□□□ -0.62
CDKL5-202ENST00000379996 PREX1Q8TCU6 1659 aa11.15□□□□□ -0.62
CDKL5-202ENST00000379996 SPATA31D1Q6ZQQ2 1576 aa11.15□□□□□ -0.62
CDKL5-202ENST00000379996 CAPN15O75808 1086 aa11.15□□□□□ -0.62
CDKL5-202ENST00000379996 MPHOSPH9Q99550 1183 aa11.15□□□□□ -0.62
CDKL5-202ENST00000379996 ANKRD30BQ9BXX2 1392 aa11.14□□□□□ -0.63
CDKL5-202ENST00000379996 NOS1P29475 1434 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms