RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 PHF23Q9BUL5 403 aaPredicted RBP16.43■□□□□ 0.22
HIPK3-202ENST00000379016 HOMER1Q86YM7 354 aa16.43■□□□□ 0.22
HIPK3-202ENST00000379016 FAM184AQ8NB25 1140 aa16.43■□□□□ 0.22
HIPK3-202ENST00000379016 TEX35Q5T0J7 233 aa16.42■□□□□ 0.22
HIPK3-202ENST00000379016 BECN2A8MW95 431 aa16.42■□□□□ 0.22
HIPK3-202ENST00000379016 TMEM132AQ24JP5 1023 aa16.42■□□□□ 0.22
HIPK3-202ENST00000379016 MEX3CQ5U5Q3 659 aaKnown RBP16.42■□□□□ 0.22
HIPK3-202ENST00000379016 ANKRD62A6NC57 917 aa16.41■□□□□ 0.22
HIPK3-202ENST00000379016 NOL10Q9BSC4 688 aaKnown RBP16.4■□□□□ 0.22
HIPK3-202ENST00000379016 NEFHP12036 1026 aa16.4■□□□□ 0.22
HIPK3-202ENST00000379016 NUTM2FA1L443 756 aa16.39■□□□□ 0.21
HIPK3-202ENST00000379016 WDR70Q9NW82 654 aa16.39■□□□□ 0.21
HIPK3-202ENST00000379016 PLEKHD1A6NEE1 506 aa16.39■□□□□ 0.21
HIPK3-202ENST00000379016 AMOTL1Q8IY63 956 aa16.38■□□□□ 0.21
HIPK3-202ENST00000379016 DCAF8L1A6NGE4 600 aa16.38■□□□□ 0.21
HIPK3-202ENST00000379016 MORC1Q86VD1 984 aa16.38■□□□□ 0.21
HIPK3-202ENST00000379016 EPS15P42566 896 aa16.37■□□□□ 0.21
HIPK3-202ENST00000379016 CDR1P51861 262 aa16.37■□□□□ 0.21
HIPK3-202ENST00000379016 HSP90AB3PQ58FF7 597 aa16.37■□□□□ 0.21
HIPK3-202ENST00000379016 NUTM2DQ5VT03 806 aaPredicted RBP16.37■□□□□ 0.21
HIPK3-202ENST00000379016 IPO8O15397 1037 aaKnown RBP16.36■□□□□ 0.21
HIPK3-202ENST00000379016 SYNE3Q6ZMZ3 975 aa16.36■□□□□ 0.21
HIPK3-202ENST00000379016 CCDC47Q96A33 483 aaKnown RBP16.36■□□□□ 0.21
HIPK3-202ENST00000379016 H0YHG0 523 aa16.35■□□□□ 0.21
HIPK3-202ENST00000379016 WWC2Q6AWC2 1192 aa16.35■□□□□ 0.21
HIPK3-202ENST00000379016 STK11IPQ8N1F8 1099 aa16.35■□□□□ 0.21
HIPK3-202ENST00000379016 KIF3AQ9Y496 699 aa16.35■□□□□ 0.21
HIPK3-202ENST00000379016 RDXP35241 583 aaKnown RBP16.34■□□□□ 0.21
HIPK3-202ENST00000379016 ANKRD20A12PQ8NF67 263 aa16.34■□□□□ 0.21
HIPK3-202ENST00000379016 NOM1Q5C9Z4 860 aaKnown RBP16.34■□□□□ 0.21
HIPK3-202ENST00000379016 LTV1Q96GA3 475 aaPredicted RBP16.34■□□□□ 0.21
HIPK3-202ENST00000379016 STK31Q9BXU1 1019 aa16.34■□□□□ 0.21
HIPK3-202ENST00000379016 ZRSR2Q15696 482 aaKnown RBP16.33■□□□□ 0.2
HIPK3-202ENST00000379016 TTLL5Q6EMB2 1281 aa16.32■□□□□ 0.2
HIPK3-202ENST00000379016 RILPL2Q969X0 211 aa16.32■□□□□ 0.2
HIPK3-202ENST00000379016 TRIM29Q14134 588 aa16.32■□□□□ 0.2
HIPK3-202ENST00000379016 SIN3AQ96ST3 1273 aa16.31■□□□□ 0.2
HIPK3-202ENST00000379016 SLC4A3P48751 1232 aa16.31■□□□□ 0.2
HIPK3-202ENST00000379016 FOSBP53539 338 aa16.31■□□□□ 0.2
HIPK3-202ENST00000379016 CCAR1Q8IX12 1150 aaKnown RBP16.31■□□□□ 0.2
HIPK3-202ENST00000379016 SPAG9O60271 1321 aaKnown RBP16.31■□□□□ 0.2
HIPK3-202ENST00000379016 CFDP1Q9UEE9 299 aaPredicted RBP16.31■□□□□ 0.2
HIPK3-202ENST00000379016 NGEFQ8N5V2 710 aa16.31■□□□□ 0.2
HIPK3-202ENST00000379016 DCTN1Q14203 1278 aa16.3■□□□□ 0.2
HIPK3-202ENST00000379016 VPS37DQ86XT2 251 aa16.3■□□□□ 0.2
HIPK3-202ENST00000379016 GGT6Q6P531 493 aa16.3■□□□□ 0.2
HIPK3-202ENST00000379016 BCCIPQ9P287 314 aaKnown RBP eCLIP16.29■□□□□ 0.2
HIPK3-202ENST00000379016 IBSPP21815 317 aaPredicted RBP16.29■□□□□ 0.2
HIPK3-202ENST00000379016 CCDC173Q0VFZ6 552 aa16.28■□□□□ 0.2
HIPK3-202ENST00000379016 MTMR7Q9Y216 660 aa16.28■□□□□ 0.2
HIPK3-202ENST00000379016 HDGFP51858 240 aaKnown RBP16.28■□□□□ 0.2
HIPK3-202ENST00000379016 CAGE1Q8TC20 777 aa16.28■□□□□ 0.2
HIPK3-202ENST00000379016 OFD1O75665 1012 aa16.27■□□□□ 0.2
HIPK3-202ENST00000379016 SEPT7Q16181 437 aaKnown RBP16.27■□□□□ 0.2
HIPK3-202ENST00000379016 ST18O60284 1047 aa16.27■□□□□ 0.19
HIPK3-202ENST00000379016 HMGN5P82970 282 aaKnown RBP16.27■□□□□ 0.19
HIPK3-202ENST00000379016 DCAF11Q8TEB1 546 aa16.26■□□□□ 0.19
HIPK3-202ENST00000379016 SEPT11Q9NVA2 429 aaKnown RBP16.26■□□□□ 0.19
HIPK3-202ENST00000379016 TCERG1O14776 1098 aaKnown RBP16.26■□□□□ 0.19
HIPK3-202ENST00000379016 RWDD1Q9H446 243 aaPredicted RBP16.25■□□□□ 0.19
HIPK3-202ENST00000379016 EVA1CP58658 441 aa16.25■□□□□ 0.19
HIPK3-202ENST00000379016 ENOX2Q16206 610 aaKnown RBP16.25■□□□□ 0.19
HIPK3-202ENST00000379016 FYB1O15117 783 aa16.24■□□□□ 0.19
HIPK3-202ENST00000379016 HDGFL2Q7Z4V5 671 aaPredicted RBP16.24■□□□□ 0.19
HIPK3-202ENST00000379016 IKQ13123 557 aaPredicted RBP16.24■□□□□ 0.19
HIPK3-202ENST00000379016 KDM4AO75164 1064 aa16.24■□□□□ 0.19
HIPK3-202ENST00000379016 U2AF1L5P0DN76 240 aaPredicted RBP16.24■□□□□ 0.19
HIPK3-202ENST00000379016 U2AF1Q01081 240 aaKnown RBP eCLIP16.24■□□□□ 0.198e-15■■■■■ 28.3
HIPK3-202ENST00000379016 TSPYL1Q9H0U9 437 aa16.24■□□□□ 0.19
HIPK3-202ENST00000379016 FAM13BQ9NYF5 915 aa16.23■□□□□ 0.19
HIPK3-202ENST00000379016 TMF1P82094 1093 aa16.23■□□□□ 0.19
HIPK3-202ENST00000379016 NEXNQ0ZGT2 675 aa16.23■□□□□ 0.19
HIPK3-202ENST00000379016 NFXL1Q6ZNB6 911 aa16.23■□□□□ 0.19
HIPK3-202ENST00000379016 HOOK1Q9UJC3 728 aaKnown RBP16.22■□□□□ 0.19
HIPK3-202ENST00000379016 HSP90B2PQ58FF3 399 aa16.22■□□□□ 0.19
HIPK3-202ENST00000379016 TIMELESSQ9UNS1 1208 aa16.22■□□□□ 0.19
HIPK3-202ENST00000379016 CLASRPQ8N2M8 674 aaKnown RBP16.21■□□□□ 0.19
HIPK3-202ENST00000379016 SMC4Q9NTJ3 1288 aa16.21■□□□□ 0.19
HIPK3-202ENST00000379016 SYTL4Q96C24 671 aaPredicted RBP16.21■□□□□ 0.19
HIPK3-202ENST00000379016 PDILTQ8N807 584 aa16.21■□□□□ 0.19
HIPK3-202ENST00000379016 ACBD3Q9H3P7 528 aa16.21■□□□□ 0.19
HIPK3-202ENST00000379016 MYO6Q9UM54 1294 aa16.2■□□□□ 0.18
HIPK3-202ENST00000379016 SCRIBQ14160 1630 aa16.19■□□□□ 0.18
HIPK3-202ENST00000379016 FOXD1Q16676 465 aa16.19■□□□□ 0.18
HIPK3-202ENST00000379016 MNS1Q8NEH6 495 aa16.19■□□□□ 0.18
HIPK3-202ENST00000379016 NF2P35240 595 aa16.19■□□□□ 0.18
HIPK3-202ENST00000379016 DDX49Q9Y6V7 483 aaKnown RBP16.18■□□□□ 0.18
HIPK3-202ENST00000379016 CPLX2Q6PUV4 134 aaKnown RBP16.18■□□□□ 0.18
HIPK3-202ENST00000379016 LMOD3Q0VAK6 560 aa16.18■□□□□ 0.18
HIPK3-202ENST00000379016 PPP1R1BQ9UD71 204 aaPredicted RBP16.18■□□□□ 0.18
HIPK3-202ENST00000379016 HDAC5Q9UQL6 1122 aa16.18■□□□□ 0.18
HIPK3-202ENST00000379016 ERICH2A1L162 156 aa16.17■□□□□ 0.18
HIPK3-202ENST00000379016 BICD2Q8TD16 824 aa16.17■□□□□ 0.18
HIPK3-202ENST00000379016 CPLX1O14810 134 aa16.17■□□□□ 0.18
HIPK3-202ENST00000379016 DYDC1Q8WWB3 177 aa16.17■□□□□ 0.18
HIPK3-202ENST00000379016 CLUAP1Q96AJ1 413 aa16.17■□□□□ 0.18
HIPK3-202ENST00000379016 SYCP1Q15431 976 aa16.17■□□□□ 0.18
HIPK3-202ENST00000379016 PMFBP1Q8TBY8 1022 aa16.16■□□□□ 0.18
HIPK3-202ENST00000379016 NEBLO76041 1014 aa16.15■□□□□ 0.18
HIPK3-202ENST00000379016 ZCCHC6Q5VYS8 1495 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms