RNA–Protein interactions for RNA: ENST00000378910.9

NPHS1-202, Transcript of NPHS1, nephrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHS1, Length 4,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1-202ENST00000378910 UACAQ9BZF9 1416 aa14.84□□□□□ -0.03
NPHS1-202ENST00000378910 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.84□□□□□ -0.03
NPHS1-202ENST00000378910 CENPQQ7L2Z9 268 aaPredicted RBP14.84□□□□□ -0.03
NPHS1-202ENST00000378910 GOLGA2Q08379 1002 aa14.83□□□□□ -0.03
NPHS1-202ENST00000378910 CCDC184Q52MB2 194 aa14.83□□□□□ -0.03
NPHS1-202ENST00000378910 CHMP7Q8WUX9 453 aaPredicted RBP14.83□□□□□ -0.04
NPHS1-202ENST00000378910 KIAA1211Q6ZU35 1233 aa14.83□□□□□ -0.04
NPHS1-202ENST00000378910 ST20-MTHFSA0A0A6YYL1 179 aa14.82□□□□□ -0.04
NPHS1-202ENST00000378910 ZNF526Q8TF50 670 aaPredicted RBP14.82□□□□□ -0.04
NPHS1-202ENST00000378910 CGNQ9P2M7 1197 aaKnown RBP14.82□□□□□ -0.04
NPHS1-202ENST00000378910 LRRC9Q6ZRR7 1453 aa14.82□□□□□ -0.04
NPHS1-202ENST00000378910 USP47Q96K76 1375 aa14.8□□□□□ -0.04
NPHS1-202ENST00000378910 ATAD2BQ9ULI0 1458 aa14.8□□□□□ -0.04
NPHS1-202ENST00000378910 AKNAQ7Z591 1439 aa14.8□□□□□ -0.04
NPHS1-202ENST00000378910 EIF4G1Q04637 1599 aaKnown RBP14.8□□□□□ -0.04
NPHS1-202ENST00000378910 SECISBP2LQ93073 1101 aaKnown RBP14.79□□□□□ -0.04
NPHS1-202ENST00000378910 NUP155O75694 1391 aa14.79□□□□□ -0.04
NPHS1-202ENST00000378910 TPRNQ4KMQ1 711 aa14.79□□□□□ -0.04
NPHS1-202ENST00000378910 SMAP1Q8IYB5 467 aaPredicted RBP14.79□□□□□ -0.04
NPHS1-202ENST00000378910 FGD6Q6ZV73 1430 aa14.79□□□□□ -0.04
NPHS1-202ENST00000378910 CCDC66A2RUB6 948 aa14.78□□□□□ -0.04
NPHS1-202ENST00000378910 TEX2Q8IWB9 1127 aa14.78□□□□□ -0.04
NPHS1-202ENST00000378910 R3HCC1Q9Y3T6 440 aaKnown RBP14.78□□□□□ -0.04
NPHS1-202ENST00000378910 HMGB1P09429 215 aaKnown RBP14.77□□□□□ -0.05
NPHS1-202ENST00000378910 CLCN1P35523 988 aa14.77□□□□□ -0.05
NPHS1-202ENST00000378910 HDAC5Q9UQL6 1122 aa14.77□□□□□ -0.05
NPHS1-202ENST00000378910 PPP4R3BQ5MIZ7 849 aa14.77□□□□□ -0.05
NPHS1-202ENST00000378910 STAC3Q96MF2 364 aa14.77□□□□□ -0.05
NPHS1-202ENST00000378910 GBP4Q96PP9 640 aa14.77□□□□□ -0.05
NPHS1-202ENST00000378910 ESPNB1AK53 854 aa14.76□□□□□ -0.05
NPHS1-202ENST00000378910 RWDD1Q9H446 243 aaPredicted RBP14.76□□□□□ -0.05
NPHS1-202ENST00000378910 SYNJ1O43426 1573 aa14.75□□□□□ -0.05
NPHS1-202ENST00000378910 IGF1RP08069 1367 aa14.75□□□□□ -0.05
NPHS1-202ENST00000378910 MAPK8IP3Q9UPT6 1336 aa14.75□□□□□ -0.05
NPHS1-202ENST00000378910 MFAP1P55081 439 aaKnown RBP14.75□□□□□ -0.05
NPHS1-202ENST00000378910 PMFBP1Q8TBY8 1022 aa14.74□□□□□ -0.05
NPHS1-202ENST00000378910 BACH2Q9BYV9 841 aa14.74□□□□□ -0.05
NPHS1-202ENST00000378910 GTF2E1P29083 439 aaPredicted RBP14.74□□□□□ -0.05
NPHS1-202ENST00000378910 CCDC146Q8IYE0 955 aa14.73□□□□□ -0.05
NPHS1-202ENST00000378910 PLCD4Q9BRC7 762 aa14.73□□□□□ -0.05
NPHS1-202ENST00000378910 ERICH3Q5RHP9 1530 aa14.73□□□□□ -0.05
NPHS1-202ENST00000378910 FRAT2O75474 233 aaPredicted RBP14.73□□□□□ -0.05
NPHS1-202ENST00000378910 OS9Q13438 667 aaPredicted RBP14.73□□□□□ -0.05
NPHS1-202ENST00000378910 ZBTB7CA1YPR0 619 aa14.72□□□□□ -0.05
NPHS1-202ENST00000378910 CALRP27797 417 aaKnown RBP14.72□□□□□ -0.05
NPHS1-202ENST00000378910 CHAF1AQ13111 956 aaPredicted RBP14.72□□□□□ -0.05
NPHS1-202ENST00000378910 TDRD9Q8NDG6 1382 aaKnown RBP14.72□□□□□ -0.05
NPHS1-202ENST00000378910 ANKRD30AQ9BXX3 1397 aa14.72□□□□□ -0.05
NPHS1-202ENST00000378910 CASC1Q6TDU7 716 aa14.72□□□□□ -0.05
NPHS1-202ENST00000378910 SAMD1Q6SPF0 538 aaPredicted RBP14.71□□□□□ -0.05
NPHS1-202ENST00000378910 RRAGDQ9NQL2 400 aaPredicted RBP14.71□□□□□ -0.05
NPHS1-202ENST00000378910 CLUAP1Q96AJ1 413 aa14.71□□□□□ -0.05
NPHS1-202ENST00000378910 DNAJC2Q99543 621 aaKnown RBP14.71□□□□□ -0.05
NPHS1-202ENST00000378910 PRXQ9BXM0 1461 aa14.71□□□□□ -0.05
NPHS1-202ENST00000378910 U2SURPO15042 1029 aaKnown RBP14.71□□□□□ -0.06
NPHS1-202ENST00000378910 AXDND1Q5T1B0 1012 aaPredicted RBP14.71□□□□□ -0.06
NPHS1-202ENST00000378910 SMG6Q86US8 1419 aaKnown RBP14.7□□□□□ -0.06
NPHS1-202ENST00000378910 PANK3Q9H999 370 aa14.7□□□□□ -0.06
NPHS1-202ENST00000378910 CENPJQ9HC77 1338 aaPredicted RBP14.7□□□□□ -0.06
NPHS1-202ENST00000378910 MORC1Q86VD1 984 aa14.69□□□□□ -0.06
NPHS1-202ENST00000378910 CFAP44Q96MT7 982 aa14.69□□□□□ -0.06
NPHS1-202ENST00000378910 PLCB2Q00722 1185 aa14.69□□□□□ -0.06
NPHS1-202ENST00000378910 LETM1O95202 739 aaPredicted RBP14.68□□□□□ -0.06
NPHS1-202ENST00000378910 CDCA7LQ96GN5 454 aa14.68□□□□□ -0.06
NPHS1-202ENST00000378910 MYOM3Q5VTT5 1437 aa14.68□□□□□ -0.06
NPHS1-202ENST00000378910 SENP3Q9H4L4 574 aaPredicted RBP14.68□□□□□ -0.06
NPHS1-202ENST00000378910 STAG3Q9UJ98 1225 aa14.67□□□□□ -0.06
NPHS1-202ENST00000378910 KCNJ4P48050 445 aa14.67□□□□□ -0.06
NPHS1-202ENST00000378910 PNISRQ8TF01 805 aaKnown RBP14.66□□□□□ -0.06
NPHS1-202ENST00000378910 KIF20AO95235 890 aa14.66□□□□□ -0.06
NPHS1-202ENST00000378910 CGNL1Q0VF96 1302 aa14.66□□□□□ -0.06
NPHS1-202ENST00000378910 GOLGA6L6A8MZA4 724 aa14.66□□□□□ -0.06
NPHS1-202ENST00000378910 MRE11P49959 708 aa14.66□□□□□ -0.06
NPHS1-202ENST00000378910 NBPF8Q3BBV2 869 aa14.66□□□□□ -0.06
NPHS1-202ENST00000378910 BRD4O60885 1362 aaPredicted RBP14.65□□□□□ -0.06
NPHS1-202ENST00000378910 DDX11L8A8MPP1 907 aa14.65□□□□□ -0.06
NPHS1-202ENST00000378910 COG6Q9Y2V7 657 aa14.65□□□□□ -0.06
NPHS1-202ENST00000378910 ITPRIPQ8IWB1 547 aa14.65□□□□□ -0.06
NPHS1-202ENST00000378910 ZNF622Q969S3 477 aaKnown RBP eCLIP14.64□□□□□ -0.07
NPHS1-202ENST00000378910 FBXO3Q9UK99 471 aa14.64□□□□□ -0.07
NPHS1-202ENST00000378910 UQCRHLA0A096LP55 91 aa14.63□□□□□ -0.07
NPHS1-202ENST00000378910 UQCRHP07919 91 aa14.63□□□□□ -0.07
NPHS1-202ENST00000378910 CSPP1Q1MSJ5 1256 aa14.63□□□□□ -0.07
NPHS1-202ENST00000378910 FOXD4L1Q9NU39 408 aa14.63□□□□□ -0.07
NPHS1-202ENST00000378910 CADPSQ9ULU8 1353 aa14.62□□□□□ -0.07
NPHS1-202ENST00000378910 CBX1P83916 185 aa14.62□□□□□ -0.07
NPHS1-202ENST00000378910 GTPBP4Q9BZE4 634 aaKnown RBP14.62□□□□□ -0.07
NPHS1-202ENST00000378910 TSPYL1Q9H0U9 437 aa14.62□□□□□ -0.07
NPHS1-202ENST00000378910 APAF1O14727 1248 aa14.61□□□□□ -0.07
NPHS1-202ENST00000378910 HFM1A2PYH4 1435 aa14.61□□□□□ -0.07
NPHS1-202ENST00000378910 IPO8O15397 1037 aaKnown RBP14.61□□□□□ -0.07
NPHS1-202ENST00000378910 U2AF1L5P0DN76 240 aaPredicted RBP14.61□□□□□ -0.07
NPHS1-202ENST00000378910 U2AF1Q01081 240 aaKnown RBP eCLIP14.61□□□□□ -0.07
NPHS1-202ENST00000378910 GOLGA6L1Q8N7Z2 621 aa14.61□□□□□ -0.07
NPHS1-202ENST00000378910 TIAM1Q13009 1591 aa14.6□□□□□ -0.07
NPHS1-202ENST00000378910 CERS3Q8IU89 383 aa14.6□□□□□ -0.07
NPHS1-202ENST00000378910 BCL2L13Q9BXK5 485 aa14.6□□□□□ -0.07
NPHS1-202ENST00000378910 CASKIN1Q8WXD9 1431 aa14.6□□□□□ -0.07
NPHS1-202ENST00000378910 SMC4Q9NTJ3 1288 aa14.6□□□□□ -0.07
NPHS1-202ENST00000378910 CHMP5Q9NZZ3 219 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms