RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 CEP170Q5SW79 1584 aa10.85□□□□□ -0.67
PTPRR-203ENST00000378778 KIAA0556O60303 1618 aa10.85□□□□□ -0.67
PTPRR-203ENST00000378778 PARD3Q8TEW0 1356 aa10.85□□□□□ -0.67
PTPRR-203ENST00000378778 CAMSAP2Q08AD1 1489 aa10.84□□□□□ -0.67
PTPRR-203ENST00000378778 ANKRD30AQ9BXX3 1397 aa10.84□□□□□ -0.67
PTPRR-203ENST00000378778 BLMP54132 1417 aaPredicted RBP10.84□□□□□ -0.67
PTPRR-203ENST00000378778 TROQ12816 1431 aaPredicted RBP10.83□□□□□ -0.68
PTPRR-203ENST00000378778 TDRD9Q8NDG6 1382 aaKnown RBP10.83□□□□□ -0.68
PTPRR-203ENST00000378778 KIAA0586Q9BVV6 1533 aa10.82□□□□□ -0.68
PTPRR-203ENST00000378778 GSE1Q14687 1217 aa10.81□□□□□ -0.68
PTPRR-203ENST00000378778 NUP153P49790 1475 aaKnown RBP10.81□□□□□ -0.68
PTPRR-203ENST00000378778 EXOC6Q8TAG9 804 aa10.81□□□□□ -0.68
PTPRR-203ENST00000378778 PTPRGP23470 1445 aa10.8□□□□□ -0.68
PTPRR-203ENST00000378778 CLASP1Q7Z460 1538 aa10.79□□□□□ -0.68
PTPRR-203ENST00000378778 TRPM1Q7Z4N2 1603 aa10.79□□□□□ -0.68
PTPRR-203ENST00000378778 EIF2AK4Q9P2K8 1649 aaKnown RBP10.79□□□□□ -0.68
PTPRR-203ENST00000378778 FOXD1Q16676 465 aa10.79□□□□□ -0.68
PTPRR-203ENST00000378778 GPRASP1Q5JY77 1395 aa10.78□□□□□ -0.68
PTPRR-203ENST00000378778 ANKRD50Q9ULJ7 1429 aa10.78□□□□□ -0.68
PTPRR-203ENST00000378778 CENPQQ7L2Z9 268 aaPredicted RBP10.78□□□□□ -0.68
PTPRR-203ENST00000378778 EIF3AQ14152 1382 aaKnown RBP10.78□□□□□ -0.68
PTPRR-203ENST00000378778 GPATCH8Q9UKJ3 1502 aaKnown RBP10.78□□□□□ -0.68
PTPRR-203ENST00000378778 EIF4G3O43432 1585 aaKnown RBP10.78□□□□□ -0.68
PTPRR-203ENST00000378778 ARHGEF5Q12774 1597 aa10.78□□□□□ -0.68
PTPRR-203ENST00000378778 VIRMAQ69YN4 1812 aaKnown RBP10.78□□□□□ -0.68
PTPRR-203ENST00000378778 DISP1Q96F81 1524 aa10.77□□□□□ -0.68
PTPRR-203ENST00000378778 CARD11Q9BXL7 1154 aa10.77□□□□□ -0.68
PTPRR-203ENST00000378778 ANO8Q9HCE9 1232 aaPredicted RBP10.77□□□□□ -0.68
PTPRR-203ENST00000378778 PKD2Q13563 968 aa10.76□□□□□ -0.69
PTPRR-203ENST00000378778 IL27Q8NEV9 243 aa10.76□□□□□ -0.69
PTPRR-203ENST00000378778 COL17A1Q9UMD9 1497 aaPredicted RBP10.76□□□□□ -0.69
PTPRR-203ENST00000378778 NUP160Q12769 1436 aa10.76□□□□□ -0.69
PTPRR-203ENST00000378778 TPRNQ4KMQ1 711 aa10.75□□□□□ -0.69
PTPRR-203ENST00000378778 UBE2Q2Q8WVN8 375 aa10.75□□□□□ -0.69
PTPRR-203ENST00000378778 SALL2Q9Y467 1007 aaPredicted RBP10.75□□□□□ -0.69
PTPRR-203ENST00000378778 CDC42BPAQ5VT25 1732 aa10.75□□□□□ -0.69
PTPRR-203ENST00000378778 KDM2BQ8NHM5 1336 aa10.75□□□□□ -0.69
PTPRR-203ENST00000378778 NPM2Q86SE8 214 aaKnown RBP10.75□□□□□ -0.69
PTPRR-203ENST00000378778 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.75□□□□□ -0.69
PTPRR-203ENST00000378778 PRDM15P57071 1507 aaPredicted RBP10.75□□□□□ -0.69
PTPRR-203ENST00000378778 RSPH6AQ9H0K4 717 aa10.74□□□□□ -0.69
PTPRR-203ENST00000378778 CCDC144AA2RUR9 1427 aa10.74□□□□□ -0.69
PTPRR-203ENST00000378778 ZNF608Q9ULD9 1512 aaPredicted RBP10.74□□□□□ -0.69
PTPRR-203ENST00000378778 PLCB2Q00722 1185 aa10.74□□□□□ -0.69
PTPRR-203ENST00000378778 FAM161AQ3B820 660 aa10.74□□□□□ -0.69
PTPRR-203ENST00000378778 FAM43AQ8N2R8 423 aa10.74□□□□□ -0.69
PTPRR-203ENST00000378778 NFKBIBQ15653 356 aa10.73□□□□□ -0.69
PTPRR-203ENST00000378778 LAS1LQ9Y4W2 734 aaKnown RBP10.73□□□□□ -0.69
PTPRR-203ENST00000378778 ERCC6Q03468 1493 aa10.73□□□□□ -0.69
PTPRR-203ENST00000378778 CFDP1Q9UEE9 299 aaPredicted RBP10.73□□□□□ -0.69
PTPRR-203ENST00000378778 ZMYM3Q14202 1370 aa10.73□□□□□ -0.69
PTPRR-203ENST00000378778 NGEFQ8N5V2 710 aa10.72□□□□□ -0.69
PTPRR-203ENST00000378778 PRAG1Q86YV5 1406 aa10.72□□□□□ -0.69
PTPRR-203ENST00000378778 NINLQ9Y2I6 1382 aa10.71□□□□□ -0.69
PTPRR-203ENST00000378778 ST20-MTHFSA0A0A6YYL1 179 aa10.71□□□□□ -0.69
PTPRR-203ENST00000378778 PER1O15534 1290 aaPredicted RBP10.71□□□□□ -0.69
PTPRR-203ENST00000378778 C9orf84Q5VXU9 1444 aa10.71□□□□□ -0.7
PTPRR-203ENST00000378778 IFT140Q96RY7 1462 aa10.71□□□□□ -0.7
PTPRR-203ENST00000378778 TULP1O00294 542 aaPredicted RBP10.7□□□□□ -0.7
PTPRR-203ENST00000378778 HAP1P54257 671 aaPredicted RBP10.7□□□□□ -0.7
PTPRR-203ENST00000378778 UNC13BO14795 1591 aa10.7□□□□□ -0.7
PTPRR-203ENST00000378778 ABCC10Q5T3U5 1492 aa10.7□□□□□ -0.7
PTPRR-203ENST00000378778 NUP155O75694 1391 aa10.7□□□□□ -0.7
PTPRR-203ENST00000378778 AAMPQ13685 434 aa10.7□□□□□ -0.7
PTPRR-203ENST00000378778 MAST1Q9Y2H9 1570 aa10.7□□□□□ -0.7
PTPRR-203ENST00000378778 SYNJ2O15056 1496 aa10.69□□□□□ -0.7
PTPRR-203ENST00000378778 RSPH4AQ5TD94 716 aa10.69□□□□□ -0.7
PTPRR-203ENST00000378778 POLR3GLQ9BT43 218 aa10.69□□□□□ -0.7
PTPRR-203ENST00000378778 RNF17Q9BXT8 1623 aaKnown RBP10.69□□□□□ -0.7
PTPRR-203ENST00000378778 ZNF644Q9H582 1327 aaPredicted RBP10.69□□□□□ -0.7
PTPRR-203ENST00000378778 CRBNQ96SW2 442 aa10.69□□□□□ -0.7
PTPRR-203ENST00000378778 CCDC141Q6ZP82 1450 aa10.69□□□□□ -0.7
PTPRR-203ENST00000378778 ATP10AO60312 1499 aa10.68□□□□□ -0.7
PTPRR-203ENST00000378778 MRC2Q9UBG0 1479 aa10.68□□□□□ -0.7
PTPRR-203ENST00000378778 NPC1L1Q9UHC9 1359 aa10.67□□□□□ -0.7
PTPRR-203ENST00000378778 L1TD1Q5T7N2 865 aaKnown RBP10.67□□□□□ -0.7
PTPRR-203ENST00000378778 PRG4Q92954 1404 aaPredicted RBP10.67□□□□□ -0.7
PTPRR-203ENST00000378778 FAM135AQ9P2D6 1515 aa10.67□□□□□ -0.7
PTPRR-203ENST00000378778 GRIN2AQ12879 1464 aa10.66□□□□□ -0.7
PTPRR-203ENST00000378778 ABCC2Q92887 1545 aa10.66□□□□□ -0.7
PTPRR-203ENST00000378778 ZNF326Q5BKZ1 582 aaKnown RBP10.66□□□□□ -0.7
PTPRR-203ENST00000378778 FRAT1Q92837 279 aaPredicted RBP10.66□□□□□ -0.7
PTPRR-203ENST00000378778 PLXNC1O60486 1568 aa10.66□□□□□ -0.7
PTPRR-203ENST00000378778 STAC3Q96MF2 364 aa10.66□□□□□ -0.7
PTPRR-203ENST00000378778 PIK3C2GO75747 1445 aa10.66□□□□□ -0.7
PTPRR-203ENST00000378778 CARMIL2Q6F5E8 1435 aa10.66□□□□□ -0.7
PTPRR-203ENST00000378778 ERBINQ96RT1 1412 aa10.66□□□□□ -0.7
PTPRR-203ENST00000378778 SYNMO15061 1565 aa10.65□□□□□ -0.7
PTPRR-203ENST00000378778 C8orf34Q49A92 452 aa10.65□□□□□ -0.7
PTPRR-203ENST00000378778 MYO5CQ9NQX4 1742 aa10.65□□□□□ -0.7
PTPRR-203ENST00000378778 IQGAP3Q86VI3 1631 aa10.65□□□□□ -0.7
PTPRR-203ENST00000378778 BECN1Q14457 450 aa10.65□□□□□ -0.71
PTPRR-203ENST00000378778 ZNF521Q96K83 1311 aa10.64□□□□□ -0.71
PTPRR-203ENST00000378778 MAPK8IP3Q9UPT6 1336 aa10.64□□□□□ -0.71
PTPRR-203ENST00000378778 TSPY4P0CV99 314 aa10.64□□□□□ -0.71
PTPRR-203ENST00000378778 TSPY10P0CW01 314 aa10.64□□□□□ -0.71
PTPRR-203ENST00000378778 TMF1P82094 1093 aa10.64□□□□□ -0.71
PTPRR-203ENST00000378778 ABCA8O94911 1581 aa10.64□□□□□ -0.71
PTPRR-203ENST00000378778 MAGI1Q96QZ7 1491 aaPredicted RBP10.63□□□□□ -0.71
PTPRR-203ENST00000378778 CDCA8Q53HL2 280 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms