RNA–Protein interactions for RNA: ENST00000378389.5

PRDM16-202, Transcript of PR/SET domain 16, humanhuman

TSL 5

Gene PRDM16, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-202ENST00000378389 PKD2Q13563 968 aa30.6■■■□□ 2.49
PRDM16-202ENST00000378389 PZPP20742 1482 aa30.59■■■□□ 2.49
PRDM16-202ENST00000378389 MAST1Q9Y2H9 1570 aa30.58■■■□□ 2.49
PRDM16-202ENST00000378389 DNMT1P26358 1616 aaKnown RBP30.56■■■□□ 2.48
PRDM16-202ENST00000378389 NCKAP5LQ9HCH0 1330 aa30.55■■■□□ 2.48
PRDM16-202ENST00000378389 KIF3BO15066 747 aa30.55■■■□□ 2.48
PRDM16-202ENST00000378389 MIA2Q96PC5 1412 aa30.53■■■□□ 2.48
PRDM16-202ENST00000378389 RNF17Q9BXT8 1623 aaKnown RBP30.52■■■□□ 2.48
PRDM16-202ENST00000378389 LOC105371045A0A1W2PR82 267 aa30.51■■■□□ 2.47
PRDM16-202ENST00000378389 TNRQ92752 1358 aa30.51■■■□□ 2.47
PRDM16-202ENST00000378389 TSPY4P0CV99 314 aa30.5■■■□□ 2.47
PRDM16-202ENST00000378389 TSPY10P0CW01 314 aa30.5■■■□□ 2.47
PRDM16-202ENST00000378389 MYOM3Q5VTT5 1437 aa30.48■■■□□ 2.47
PRDM16-202ENST00000378389 EIF2AK4Q9P2K8 1649 aaKnown RBP30.47■■■□□ 2.47
PRDM16-202ENST00000378389 KANK4Q5T7N3 995 aaPredicted RBP30.45■■■□□ 2.47
PRDM16-202ENST00000378389 ZNF335Q9H4Z2 1342 aaPredicted RBP30.45■■■□□ 2.46
PRDM16-202ENST00000378389 WASHC2CQ9Y4E1 1318 aa30.45■■■□□ 2.46
PRDM16-202ENST00000378389 NLRP1Q9C000 1473 aa30.44■■■□□ 2.46
PRDM16-202ENST00000378389 ZC3H13Q5T200 1668 aaKnown RBP30.44■■■□□ 2.46
PRDM16-202ENST00000378389 FBXO31Q5XUX0 539 aaPredicted RBP30.44■■■□□ 2.46
PRDM16-202ENST00000378389 POLR1AO95602 1720 aaPredicted RBP30.43■■■□□ 2.46
PRDM16-202ENST00000378389 NEURL4Q96JN8 1562 aa30.43■■■□□ 2.46
PRDM16-202ENST00000378389 ABCC3O15438 1527 aa30.41■■■□□ 2.46
PRDM16-202ENST00000378389 MROH1Q8NDA8 1641 aa30.4■■■□□ 2.46
PRDM16-202ENST00000378389 SPATA31D1Q6ZQQ2 1576 aa30.37■■■□□ 2.45
PRDM16-202ENST00000378389 SHANK2Q9UPX8 1470 aa30.35■■■□□ 2.45
PRDM16-202ENST00000378389 DUOX2Q9NRD8 1548 aa30.35■■■□□ 2.45
PRDM16-202ENST00000378389 DEPDC5O75140 1603 aa30.34■■■□□ 2.45
PRDM16-202ENST00000378389 MED14O60244 1454 aa30.33■■■□□ 2.45
PRDM16-202ENST00000378389 UGGT1Q9NYU2 1555 aa30.32■■■□□ 2.45
PRDM16-202ENST00000378389 CROCC2H7BZ55 1655 aa30.31■■■□□ 2.44
PRDM16-202ENST00000378389 THEMISQ8N1K5 641 aaPredicted RBP30.3■■■□□ 2.44
PRDM16-202ENST00000378389 CPS1P31327 1500 aa30.3■■■□□ 2.44
PRDM16-202ENST00000378389 ERVK-7P63135 1459 aa30.3■■■□□ 2.44
PRDM16-202ENST00000378389 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.28■■■□□ 2.44
PRDM16-202ENST00000378389 ABCC5O15440 1437 aa30.27■■■□□ 2.44
PRDM16-202ENST00000378389 PRDM15P57071 1507 aaPredicted RBP30.27■■■□□ 2.44
PRDM16-202ENST00000378389 PTPN23Q9H3S7 1636 aa30.26■■■□□ 2.44
PRDM16-202ENST00000378389 ANKLE2Q86XL3 938 aa30.26■■■□□ 2.43
PRDM16-202ENST00000378389 ERBINQ96RT1 1412 aa30.26■■■□□ 2.43
PRDM16-202ENST00000378389 VWDEQ8N2E2 1590 aa30.25■■■□□ 2.43
PRDM16-202ENST00000378389 ARHGAP31Q2M1Z3 1444 aa30.24■■■□□ 2.43
PRDM16-202ENST00000378389 CEP152O94986 1710 aa30.23■■■□□ 2.43
PRDM16-202ENST00000378389 KIF15Q9NS87 1388 aa30.23■■■□□ 2.43
PRDM16-202ENST00000378389 DISP3Q9P2K9 1392 aa30.22■■■□□ 2.43
PRDM16-202ENST00000378389 NPHP4O75161 1426 aaPredicted RBP30.22■■■□□ 2.43
PRDM16-202ENST00000378389 UBAP1LF5GYI3 381 aa30.21■■■□□ 2.43
PRDM16-202ENST00000378389 FGD6Q6ZV73 1430 aa30.2■■■□□ 2.42
PRDM16-202ENST00000378389 DAPK1P53355 1430 aa30.19■■■□□ 2.42
PRDM16-202ENST00000378389 IQGAP1P46940 1657 aa30.18■■■□□ 2.42
PRDM16-202ENST00000378389 UBR1Q8IWV7 1749 aa30.16■■■□□ 2.42
PRDM16-202ENST00000378389 APLP2Q06481 763 aa30.13■■■□□ 2.41
PRDM16-202ENST00000378389 ARHGAP23Q9P227 1491 aa30.12■■■□□ 2.41
PRDM16-202ENST00000378389 ILDR2Q71H61 639 aa30.11■■■□□ 2.41
PRDM16-202ENST00000378389 SLIT1O75093 1534 aa30.11■■■□□ 2.41
PRDM16-202ENST00000378389 LMTK2Q8IWU2 1503 aa30.11■■■□□ 2.41
PRDM16-202ENST00000378389 CFAP65Q6ZU64 1925 aaKnown RBP30.08■■■□□ 2.41
PRDM16-202ENST00000378389 RRP7BPQ9NSQ0 103 aa30.07■■■□□ 2.4
PRDM16-202ENST00000378389 ADGRL2O95490 1459 aa30.06■■■□□ 2.4
PRDM16-202ENST00000378389 SCAF11Q99590 1463 aaKnown RBP30.06■■■□□ 2.4
PRDM16-202ENST00000378389 ANKRD30AQ9BXX3 1397 aa30.05■■■□□ 2.4
PRDM16-202ENST00000378389 ALKQ9UM73 1620 aa30.05■■■□□ 2.4
PRDM16-202ENST00000378389 SYNMO15061 1565 aa30.05■■■□□ 2.4
PRDM16-202ENST00000378389 STRCP1A6NGW2 1772 aa30.05■■■□□ 2.4
PRDM16-202ENST00000378389 KDM5AP29375 1690 aaKnown RBP30.04■■■□□ 2.4
PRDM16-202ENST00000378389 TOM1O60784 492 aa30.04■■■□□ 2.4
PRDM16-202ENST00000378389 KANK1Q14678 1352 aa30.01■■■□□ 2.39
PRDM16-202ENST00000378389 LRRC7Q96NW7 1537 aa30■■■□□ 2.39
PRDM16-202ENST00000378389 SOCS7O14512 581 aa29.99■■■□□ 2.39
PRDM16-202ENST00000378389 PIK3C2BO00750 1634 aa29.98■■■□□ 2.39
PRDM16-202ENST00000378389 LTKP29376 864 aa29.96■■■□□ 2.39
PRDM16-202ENST00000378389 EFCAB6Q5THR3 1501 aa29.96■■■□□ 2.39
PRDM16-202ENST00000378389 NOS1P29475 1434 aa29.95■■■□□ 2.38
PRDM16-202ENST00000378389 TMEM2Q9UHN6 1383 aa29.93■■■□□ 2.38
PRDM16-202ENST00000378389 HSPA1LP34931 641 aa29.93■■■□□ 2.38
PRDM16-202ENST00000378389 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.92■■■□□ 2.38
PRDM16-202ENST00000378389 TXNDC2Q86VQ3 553 aa29.9■■■□□ 2.38
PRDM16-202ENST00000378389 CHIC2Q9UKJ5 165 aa29.9■■■□□ 2.38
PRDM16-202ENST00000378389 PIP4K2BP78356 416 aa29.89■■■□□ 2.38
PRDM16-202ENST00000378389 RPRD2Q5VT52 1461 aaKnown RBP29.87■■■□□ 2.37
PRDM16-202ENST00000378389 EID1Q9Y6B2 187 aa29.87■■■□□ 2.37
PRDM16-202ENST00000378389 IDI1Q13907 227 aa29.85■■■□□ 2.37
PRDM16-202ENST00000378389 ANKRD50Q9ULJ7 1429 aa29.85■■■□□ 2.37
PRDM16-202ENST00000378389 MED1Q15648 1581 aaPredicted RBP29.85■■■□□ 2.37
PRDM16-202ENST00000378389 SCAF1Q9H7N4 1312 aaKnown RBP29.84■■■□□ 2.37
PRDM16-202ENST00000378389 ADGRB3O60242 1522 aa29.84■■■□□ 2.37
PRDM16-202ENST00000378389 XIRP1Q702N8 1843 aaKnown RBP29.82■■■□□ 2.36
PRDM16-202ENST00000378389 TET3O43151 1660 aa29.82■■■□□ 2.36
PRDM16-202ENST00000378389 SLC52A1Q9NWF4 448 aa29.8■■■□□ 2.36
PRDM16-202ENST00000378389 UNC13BO14795 1591 aa29.77■■■□□ 2.36
PRDM16-202ENST00000378389 FAM50AQ14320 339 aaKnown RBP29.76■■■□□ 2.35
PRDM16-202ENST00000378389 STAG3Q9UJ98 1225 aa29.76■■■□□ 2.35
PRDM16-202ENST00000378389 ROCK1Q13464 1354 aa29.75■■■□□ 2.35
PRDM16-202ENST00000378389 GCC2Q8IWJ2 1684 aa29.74■■■□□ 2.35
PRDM16-202ENST00000378389 NWD1Q149M9 1564 aa29.73■■■□□ 2.35
PRDM16-202ENST00000378389 ZFYVE9O95405 1425 aa29.71■■■□□ 2.35
PRDM16-202ENST00000378389 KCNA6P17658 529 aa29.7■■■□□ 2.35
PRDM16-202ENST00000378389 NKTRP30414 1462 aaKnown RBP29.68■■■□□ 2.34
PRDM16-202ENST00000378389 TMEM131LA2VDJ0 1609 aa29.67■■■□□ 2.34
PRDM16-202ENST00000378389 TMEM94Q12767 1356 aa29.65■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms