RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 RILPL2Q969X0 211 aa17.59■□□□□ 0.41
TRIM13-202ENST00000378182 SF3A1Q15459 793 aaKnown RBP17.59■□□□□ 0.41
TRIM13-202ENST00000378182 CFAP44Q96MT7 982 aa17.58■□□□□ 0.41
TRIM13-202ENST00000378182 TRAK1Q9UPV9 953 aa17.58■□□□□ 0.41
TRIM13-202ENST00000378182 HSPA5P11021 654 aaKnown RBP17.58■□□□□ 0.4
TRIM13-202ENST00000378182 EIF2S2P20042 333 aaKnown RBP17.57■□□□□ 0.4
TRIM13-202ENST00000378182 AKAP17AQ02040 695 aaKnown RBP17.57■□□□□ 0.4
TRIM13-202ENST00000378182 CUX2O14529 1486 aa17.57■□□□□ 0.4
TRIM13-202ENST00000378182 TERF2IPQ9NYB0 399 aa17.56■□□□□ 0.4
TRIM13-202ENST00000378182 RRP7AQ9Y3A4 280 aaKnown RBP17.56■□□□□ 0.4
TRIM13-202ENST00000378182 CCDC34Q96HJ3 373 aa17.56■□□□□ 0.4
TRIM13-202ENST00000378182 CYB5RLQ6IPT4 315 aa17.56■□□□□ 0.4
TRIM13-202ENST00000378182 AMOTL1Q8IY63 956 aa17.56■□□□□ 0.4
TRIM13-202ENST00000378182 ELL2O00472 640 aaPredicted RBP17.56■□□□□ 0.4
TRIM13-202ENST00000378182 H3BQV1 296 aa17.56■□□□□ 0.4
TRIM13-202ENST00000378182 IFFO2Q5TF58 517 aa17.56■□□□□ 0.4
TRIM13-202ENST00000378182 PATL2C9JE40 543 aaKnown RBP17.55■□□□□ 0.4
TRIM13-202ENST00000378182 CCDC180Q9P1Z9 1646 aa17.55■□□□□ 0.4
TRIM13-202ENST00000378182 RWDD1Q9H446 243 aaPredicted RBP17.54■□□□□ 0.4
TRIM13-202ENST00000378182 APPP05067 770 aa17.54■□□□□ 0.4
TRIM13-202ENST00000378182 FYB1O15117 783 aa17.54■□□□□ 0.4
TRIM13-202ENST00000378182 GBP4Q96PP9 640 aa17.54■□□□□ 0.4
TRIM13-202ENST00000378182 GOLGA6L1Q8N7Z2 621 aa17.53■□□□□ 0.4
TRIM13-202ENST00000378182 TTC5Q8N0Z6 440 aa17.53■□□□□ 0.4
TRIM13-202ENST00000378182 HMMRO75330 724 aa17.52■□□□□ 0.4
TRIM13-202ENST00000378182 KIF16BQ96L93 1317 aa17.52■□□□□ 0.4
TRIM13-202ENST00000378182 NUP155O75694 1391 aa17.52■□□□□ 0.4
TRIM13-202ENST00000378182 CARMIL2Q6F5E8 1435 aa17.52■□□□□ 0.39
TRIM13-202ENST00000378182 PSME1Q06323 249 aa17.52■□□□□ 0.39
TRIM13-202ENST00000378182 CEP164Q9UPV0 1460 aa17.51■□□□□ 0.39
TRIM13-202ENST00000378182 MTMR7Q9Y216 660 aa17.51■□□□□ 0.39
TRIM13-202ENST00000378182 PCMTD1Q96MG8 357 aaPredicted RBP17.51■□□□□ 0.39
TRIM13-202ENST00000378182 EEA1Q15075 1411 aa17.5■□□□□ 0.39
TRIM13-202ENST00000378182 MCTP1Q6DN14 999 aa17.5■□□□□ 0.39
TRIM13-202ENST00000378182 TPM3P06753 285 aa17.5■□□□□ 0.39
TRIM13-202ENST00000378182 EIF3AQ14152 1382 aaKnown RBP17.5■□□□□ 0.39
TRIM13-202ENST00000378182 EFCAB2Q5VUJ9 269 aa17.5■□□□□ 0.39
TRIM13-202ENST00000378182 SYAP1Q96A49 352 aaPredicted RBP17.5■□□□□ 0.39
TRIM13-202ENST00000378182 ARHGAP35Q9NRY4 1499 aa17.5■□□□□ 0.39
TRIM13-202ENST00000378182 CARMIL1Q5VZK9 1371 aa17.49■□□□□ 0.39
TRIM13-202ENST00000378182 SLC4A3P48751 1232 aa17.49■□□□□ 0.39
TRIM13-202ENST00000378182 FAM184AQ8NB25 1140 aa17.49■□□□□ 0.39
TRIM13-202ENST00000378182 RCAN3Q9UKA8 241 aa17.48■□□□□ 0.39
TRIM13-202ENST00000378182 FOSBP53539 338 aa17.48■□□□□ 0.39
TRIM13-202ENST00000378182 CCAR2Q8N163 923 aaKnown RBP17.48■□□□□ 0.39
TRIM13-202ENST00000378182 RBM33Q96EV2 1170 aaKnown RBP17.48■□□□□ 0.39
TRIM13-202ENST00000378182 CCDC43Q96MW1 224 aaKnown RBP17.47■□□□□ 0.39
TRIM13-202ENST00000378182 SYNE3Q6ZMZ3 975 aa17.47■□□□□ 0.39
TRIM13-202ENST00000378182 FHAD1B1AJZ9 1412 aa17.47■□□□□ 0.39
TRIM13-202ENST00000378182 KDM4AO75164 1064 aa17.47■□□□□ 0.39
TRIM13-202ENST00000378182 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.46■□□□□ 0.391e-6■■■■■ 67.3
TRIM13-202ENST00000378182 TSR1Q2NL82 804 aaKnown RBP17.46■□□□□ 0.39
TRIM13-202ENST00000378182 PMFBP1Q8TBY8 1022 aa17.46■□□□□ 0.39
TRIM13-202ENST00000378182 CHMP4AQ9BY43 222 aa17.45■□□□□ 0.38
TRIM13-202ENST00000378182 HDAC5Q9UQL6 1122 aa17.45■□□□□ 0.38
TRIM13-202ENST00000378182 FAM177BA6PVY3 158 aa17.45■□□□□ 0.38
TRIM13-202ENST00000378182 TEFQ10587 303 aa17.45■□□□□ 0.38
TRIM13-202ENST00000378182 TPM2P07951 284 aa17.45■□□□□ 0.38
TRIM13-202ENST00000378182 USP35Q9P2H5 1018 aa17.45■□□□□ 0.38
TRIM13-202ENST00000378182 CSPP1Q1MSJ5 1256 aa17.44■□□□□ 0.38
TRIM13-202ENST00000378182 BCL2L13Q9BXK5 485 aa17.44■□□□□ 0.38
TRIM13-202ENST00000378182 PLIN1O60240 522 aa17.44■□□□□ 0.38
TRIM13-202ENST00000378182 NUTM2GQ5VZR2 741 aa17.44■□□□□ 0.38
TRIM13-202ENST00000378182 C9orf78Q9NZ63 289 aaPredicted RBP17.44■□□□□ 0.38
TRIM13-202ENST00000378182 CCDC27Q2M243 656 aa17.43■□□□□ 0.38
TRIM13-202ENST00000378182 COG3Q96JB2 828 aa17.43■□□□□ 0.38
TRIM13-202ENST00000378182 MYO15BQ96JP2 1530 aa17.42■□□□□ 0.38
TRIM13-202ENST00000378182 CCAR1Q8IX12 1150 aaKnown RBP17.42■□□□□ 0.38
TRIM13-202ENST00000378182 MINK1Q8N4C8 1332 aaPredicted RBP17.42■□□□□ 0.38
TRIM13-202ENST00000378182 LMOD3Q0VAK6 560 aa17.42■□□□□ 0.38
TRIM13-202ENST00000378182 MPHOSPH9Q99550 1183 aa17.41■□□□□ 0.38
TRIM13-202ENST00000378182 IKQ13123 557 aaPredicted RBP17.4■□□□□ 0.38
TRIM13-202ENST00000378182 NFXL1Q6ZNB6 911 aa17.4■□□□□ 0.38
TRIM13-202ENST00000378182 ATF3P18847 181 aa17.4■□□□□ 0.38
TRIM13-202ENST00000378182 ANKRD45Q5TZF3 282 aa17.4■□□□□ 0.38
TRIM13-202ENST00000378182 TNNT3P45378 269 aaPredicted RBP17.39■□□□□ 0.38
TRIM13-202ENST00000378182 TCERG1O14776 1098 aaKnown RBP17.39■□□□□ 0.37
TRIM13-202ENST00000378182 NEXNQ0ZGT2 675 aa17.39■□□□□ 0.37
TRIM13-202ENST00000378182 TMEM132AQ24JP5 1023 aa17.39■□□□□ 0.37
TRIM13-202ENST00000378182 TRIM29Q14134 588 aa17.39■□□□□ 0.37
TRIM13-202ENST00000378182 NUTM2BA6NNL0 878 aaPredicted RBP17.38■□□□□ 0.37
TRIM13-202ENST00000378182 NUTM2EB1AL46 878 aaPredicted RBP17.38■□□□□ 0.37
TRIM13-202ENST00000378182 NUTM2AQ8IVF1 878 aaPredicted RBP17.38■□□□□ 0.37
TRIM13-202ENST00000378182 SF3B2Q13435 895 aaKnown RBP17.38■□□□□ 0.37
TRIM13-202ENST00000378182 PTMSP20962 102 aa17.37■□□□□ 0.37
TRIM13-202ENST00000378182 CENPJQ9HC77 1338 aaPredicted RBP17.37■□□□□ 0.37
TRIM13-202ENST00000378182 AIMP1Q12904 312 aaKnown RBP17.37■□□□□ 0.37
TRIM13-202ENST00000378182 ZNF428Q96B54 188 aa17.36■□□□□ 0.37
TRIM13-202ENST00000378182 PRDM2Q13029 1718 aa17.36■□□□□ 0.37
TRIM13-202ENST00000378182 ST18O60284 1047 aa17.36■□□□□ 0.37
TRIM13-202ENST00000378182 CECR2Q9BXF3 1484 aa17.36■□□□□ 0.37
TRIM13-202ENST00000378182 SETD5Q9C0A6 1442 aa17.35■□□□□ 0.37
TRIM13-202ENST00000378182 DEKP35659 375 aaKnown RBP17.35■□□□□ 0.37
TRIM13-202ENST00000378182 ANKRD30AQ9BXX3 1397 aa17.35■□□□□ 0.37
TRIM13-202ENST00000378182 TDRD9Q8NDG6 1382 aaKnown RBP17.35■□□□□ 0.37
TRIM13-202ENST00000378182 ANO2Q9NQ90 1003 aa17.35■□□□□ 0.37
TRIM13-202ENST00000378182 KIF3AQ9Y496 699 aa17.35■□□□□ 0.37
TRIM13-202ENST00000378182 PIP4K2BP78356 416 aa17.34■□□□□ 0.37
TRIM13-202ENST00000378182 IBSPP21815 317 aaPredicted RBP17.34■□□□□ 0.37
TRIM13-202ENST00000378182 PAF1Q8N7H5 531 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 134.1 ms