RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 UNC13BO14795 1591 aa26.6■■□□□ 1.85
PCDHA4-201ENST00000378125 ABCC1P33527 1531 aa26.59■■□□□ 1.85
PCDHA4-201ENST00000378125 RALGAPBQ86X10 1494 aa26.58■■□□□ 1.85
PCDHA4-201ENST00000378125 POLR1AO95602 1720 aaPredicted RBP26.58■■□□□ 1.85
PCDHA4-201ENST00000378125 FKBP8Q14318 412 aa26.57■■□□□ 1.84
PCDHA4-201ENST00000378125 DUOX2Q9NRD8 1548 aa26.57■■□□□ 1.84
PCDHA4-201ENST00000378125 PLA2R1Q13018 1463 aa26.56■■□□□ 1.84
PCDHA4-201ENST00000378125 FAM9BQ8IZU0 186 aa26.56■■□□□ 1.84
PCDHA4-201ENST00000378125 SPAG9O60271 1321 aaKnown RBP26.55■■□□□ 1.84
PCDHA4-201ENST00000378125 ST20-MTHFSA0A0A6YYL1 179 aa26.55■■□□□ 1.84
PCDHA4-201ENST00000378125 MRS2Q9HD23 443 aa26.55■■□□□ 1.84
PCDHA4-201ENST00000378125 WDR7Q9Y4E6 1490 aa26.53■■□□□ 1.84
PCDHA4-201ENST00000378125 MYT1LQ9UL68 1186 aa26.53■■□□□ 1.84
PCDHA4-201ENST00000378125 ROCK2O75116 1388 aaKnown RBP26.52■■□□□ 1.84
PCDHA4-201ENST00000378125 IQGAP3Q86VI3 1631 aa26.51■■□□□ 1.83
PCDHA4-201ENST00000378125 ERBINQ96RT1 1412 aa26.51■■□□□ 1.83
PCDHA4-201ENST00000378125 NBPF1Q3BBV0 1214 aa26.48■■□□□ 1.83
PCDHA4-201ENST00000378125 FANCAO15360 1455 aa26.46■■□□□ 1.83
PCDHA4-201ENST00000378125 DHX29Q7Z478 1369 aaKnown RBP26.45■■□□□ 1.83
PCDHA4-201ENST00000378125 PRAG1Q86YV5 1406 aa26.45■■□□□ 1.82
PCDHA4-201ENST00000378125 A2MP01023 1474 aa26.44■■□□□ 1.82
PCDHA4-201ENST00000378125 MAGI2Q86UL8 1455 aa26.43■■□□□ 1.82
PCDHA4-201ENST00000378125 ASXL2Q76L83 1435 aa26.43■■□□□ 1.82
PCDHA4-201ENST00000378125 NEFLP07196 543 aa26.42■■□□□ 1.82
PCDHA4-201ENST00000378125 OSCARQ8IYS5 282 aa26.42■■□□□ 1.82
PCDHA4-201ENST00000378125 ZFYVE16Q7Z3T8 1539 aa26.41■■□□□ 1.82
PCDHA4-201ENST00000378125 ARID4BQ4LE39 1312 aaPredicted RBP26.38■■□□□ 1.81
PCDHA4-201ENST00000378125 TRPM1Q7Z4N2 1603 aa26.38■■□□□ 1.81
PCDHA4-201ENST00000378125 SCAPERQ9BY12 1400 aa26.38■■□□□ 1.81
PCDHA4-201ENST00000378125 ARAP3Q8WWN8 1544 aa26.38■■□□□ 1.81
PCDHA4-201ENST00000378125 ADGRL1O94910 1474 aa26.37■■□□□ 1.81
PCDHA4-201ENST00000378125 RTEL1-TNFRSF6BF6WH68 1400 aa26.37■■□□□ 1.81
PCDHA4-201ENST00000378125 ABCA9Q8IUA7 1624 aa26.36■■□□□ 1.81
PCDHA4-201ENST00000378125 KIF3BO15066 747 aa26.35■■□□□ 1.81
PCDHA4-201ENST00000378125 NPM1P06748 294 aaKnown RBP eCLIP26.35■■□□□ 1.81
PCDHA4-201ENST00000378125 ATP7AQ04656 1500 aa26.33■■□□□ 1.81
PCDHA4-201ENST00000378125 E9PCH4 1651 aa26.32■■□□□ 1.8
PCDHA4-201ENST00000378125 SENP3-EIF4A1A0A087X0R7 540 aa26.32■■□□□ 1.8
PCDHA4-201ENST00000378125 ATP10AO60312 1499 aa26.31■■□□□ 1.8
PCDHA4-201ENST00000378125 IRX6P78412 446 aaPredicted RBP26.31■■□□□ 1.8
PCDHA4-201ENST00000378125 INO80Q9ULG1 1556 aaPredicted RBP26.27■■□□□ 1.8
PCDHA4-201ENST00000378125 GPRASP1Q5JY77 1395 aa26.24■■□□□ 1.79
PCDHA4-201ENST00000378125 KANK1Q14678 1352 aa26.23■■□□□ 1.79
PCDHA4-201ENST00000378125 DISP3Q9P2K9 1392 aa26.21■■□□□ 1.79
PCDHA4-201ENST00000378125 TMC1Q8TDI8 760 aa26.21■■□□□ 1.79
PCDHA4-201ENST00000378125 TESK2Q96S53 571 aa26.21■■□□□ 1.79
PCDHA4-201ENST00000378125 ZBED9Q6R2W3 1325 aa26.21■■□□□ 1.79
PCDHA4-201ENST00000378125 DEPDC5O75140 1603 aa26.2■■□□□ 1.79
PCDHA4-201ENST00000378125 PRDM15P57071 1507 aaPredicted RBP26.2■■□□□ 1.78
PCDHA4-201ENST00000378125 EIF2AK4Q9P2K8 1649 aaKnown RBP26.19■■□□□ 1.78
PCDHA4-201ENST00000378125 SPHKAPQ2M3C7 1700 aa26.18■■□□□ 1.78
PCDHA4-201ENST00000378125 TRPM2O94759 1503 aa26.18■■□□□ 1.78
PCDHA4-201ENST00000378125 CLTCL1P53675 1640 aa26.18■■□□□ 1.78
PCDHA4-201ENST00000378125 CD109Q6YHK3 1445 aa26.17■■□□□ 1.78
PCDHA4-201ENST00000378125 TET3O43151 1660 aa26.16■■□□□ 1.78
PCDHA4-201ENST00000378125 PTPRTO14522 1441 aa26.16■■□□□ 1.78
PCDHA4-201ENST00000378125 KIDINS220Q9ULH0 1771 aa26.14■■□□□ 1.78
PCDHA4-201ENST00000378125 PNISRQ8TF01 805 aaKnown RBP26.14■■□□□ 1.77
PCDHA4-201ENST00000378125 TSHZ2Q9NRE2 1034 aa26.13■■□□□ 1.77
PCDHA4-201ENST00000378125 UGGT1Q9NYU2 1555 aa26.13■■□□□ 1.77
PCDHA4-201ENST00000378125 LAMC1P11047 1609 aa26.13■■□□□ 1.77
PCDHA4-201ENST00000378125 COL17A1Q9UMD9 1497 aaPredicted RBP26.12■■□□□ 1.77
PCDHA4-201ENST00000378125 CEP152O94986 1710 aa26.12■■□□□ 1.77
PCDHA4-201ENST00000378125 ZNF518AQ6AHZ1 1483 aa26.11■■□□□ 1.77
PCDHA4-201ENST00000378125 TMF1P82094 1093 aa26.11■■□□□ 1.77
PCDHA4-201ENST00000378125 MROH1Q8NDA8 1641 aa26.11■■□□□ 1.77
PCDHA4-201ENST00000378125 MADDQ8WXG6 1647 aa26.11■■□□□ 1.77
PCDHA4-201ENST00000378125 VWDEQ8N2E2 1590 aa26.11■■□□□ 1.77
PCDHA4-201ENST00000378125 MYBBP1AQ9BQG0 1328 aaKnown RBP26.11■■□□□ 1.77
PCDHA4-201ENST00000378125 CC2D1BQ5T0F9 858 aaKnown RBP26.1■■□□□ 1.77
PCDHA4-201ENST00000378125 RALBP1Q15311 655 aa26.1■■□□□ 1.77
PCDHA4-201ENST00000378125 PANK3Q9H999 370 aa26.1■■□□□ 1.77
PCDHA4-201ENST00000378125 GGT6Q6P531 493 aa26.09■■□□□ 1.77
PCDHA4-201ENST00000378125 PER1O15534 1290 aaPredicted RBP26.08■■□□□ 1.77
PCDHA4-201ENST00000378125 RNF17Q9BXT8 1623 aaKnown RBP26.07■■□□□ 1.76
PCDHA4-201ENST00000378125 KTN1Q86UP2 1357 aaKnown RBP26.06■■□□□ 1.76
PCDHA4-201ENST00000378125 RAPGEF3O95398 923 aa26.06■■□□□ 1.76
PCDHA4-201ENST00000378125 CHGAP10645 457 aaKnown RBP26.04■■□□□ 1.76
PCDHA4-201ENST00000378125 POGZQ7Z3K3 1410 aa26.03■■□□□ 1.76
PCDHA4-201ENST00000378125 BRD4O60885 1362 aaPredicted RBP26.02■■□□□ 1.76
PCDHA4-201ENST00000378125 CFAP70Q5T0N1 1121 aa26.01■■□□□ 1.75
PCDHA4-201ENST00000378125 PPRC1Q5VV67 1664 aaKnown RBP26.01■■□□□ 1.75
PCDHA4-201ENST00000378125 ADGRF5Q8IZF2 1346 aa26■■□□□ 1.75
PCDHA4-201ENST00000378125 PARD3Q8TEW0 1356 aa26■■□□□ 1.75
PCDHA4-201ENST00000378125 EFCAB6Q5THR3 1501 aa26■■□□□ 1.75
PCDHA4-201ENST00000378125 CFAP65Q6ZU64 1925 aaKnown RBP25.99■■□□□ 1.75
PCDHA4-201ENST00000378125 SALL2Q9Y467 1007 aaPredicted RBP25.99■■□□□ 1.75
PCDHA4-201ENST00000378125 CYB5RLQ6IPT4 315 aa25.98■■□□□ 1.75
PCDHA4-201ENST00000378125 NLRP13Q86W25 1043 aa25.98■■□□□ 1.75
PCDHA4-201ENST00000378125 IQGAP1P46940 1657 aa25.97■■□□□ 1.75
PCDHA4-201ENST00000378125 SCAF11Q99590 1463 aaKnown RBP25.96■■□□□ 1.75
PCDHA4-201ENST00000378125 CFAP74Q9C0B2 1584 aa25.96■■□□□ 1.75
PCDHA4-201ENST00000378125 FRMPD1Q5SYB0 1578 aa25.96■■□□□ 1.75
PCDHA4-201ENST00000378125 LRPPRCP42704 1394 aaKnown RBP25.95■■□□□ 1.74
PCDHA4-201ENST00000378125 STAC3Q96MF2 364 aa25.94■■□□□ 1.74
PCDHA4-201ENST00000378125 HECW2Q9P2P5 1572 aa25.93■■□□□ 1.74
PCDHA4-201ENST00000378125 MLH3Q9UHC1 1453 aa25.93■■□□□ 1.74
PCDHA4-201ENST00000378125 WASHC2CQ9Y4E1 1318 aa25.93■■□□□ 1.74
PCDHA4-201ENST00000378125 NUDCQ9Y266 331 aa25.93■■□□□ 1.74
PCDHA4-201ENST00000378125 KIF1BO60333 1816 aa25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms