RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 SLC4A1APQ9BWU0 796 aaKnown RBP20.54■□□□□ 0.88
CSNK1A1-202ENST00000377843 DISP1Q96F81 1524 aa20.54■□□□□ 0.88
CSNK1A1-202ENST00000377843 PDE3BQ13370 1112 aa20.53■□□□□ 0.88
CSNK1A1-202ENST00000377843 ARID4BQ4LE39 1312 aaPredicted RBP20.52■□□□□ 0.88
CSNK1A1-202ENST00000377843 KDM5CP41229 1560 aa20.52■□□□□ 0.88
CSNK1A1-202ENST00000377843 FAM161AQ3B820 660 aa20.51■□□□□ 0.87
CSNK1A1-202ENST00000377843 ZMYND15Q9H091 742 aa20.49■□□□□ 0.87
CSNK1A1-202ENST00000377843 CDK13Q14004 1512 aaKnown RBP20.49■□□□□ 0.87
CSNK1A1-202ENST00000377843 ROCK2O75116 1388 aaKnown RBP20.49■□□□□ 0.87
CSNK1A1-202ENST00000377843 RALBP1Q15311 655 aa20.48■□□□□ 0.87
CSNK1A1-202ENST00000377843 KTN1Q86UP2 1357 aaKnown RBP20.48■□□□□ 0.87
CSNK1A1-202ENST00000377843 VSIG10Q8N0Z9 540 aa20.47■□□□□ 0.87
CSNK1A1-202ENST00000377843 NUP160Q12769 1436 aa20.46■□□□□ 0.87
CSNK1A1-202ENST00000377843 KIAA0556O60303 1618 aa20.45■□□□□ 0.86
CSNK1A1-202ENST00000377843 CENPQQ7L2Z9 268 aaPredicted RBP20.43■□□□□ 0.86
CSNK1A1-202ENST00000377843 PLB1Q6P1J6 1458 aa20.43■□□□□ 0.86
CSNK1A1-202ENST00000377843 PZPP20742 1482 aa20.42■□□□□ 0.86
CSNK1A1-202ENST00000377843 NLRP13Q86W25 1043 aa20.42■□□□□ 0.86
CSNK1A1-202ENST00000377843 KIF14Q15058 1648 aa20.41■□□□□ 0.86
CSNK1A1-202ENST00000377843 RGS3P49796 1198 aa20.41■□□□□ 0.86
CSNK1A1-202ENST00000377843 DAPK1P53355 1430 aa20.4■□□□□ 0.86
CSNK1A1-202ENST00000377843 EPRSP07814 1512 aaKnown RBP20.4■□□□□ 0.86
CSNK1A1-202ENST00000377843 ST20-MTHFSA0A0A6YYL1 179 aa20.4■□□□□ 0.86
CSNK1A1-202ENST00000377843 GLIPR1L2Q4G1C9 344 aa20.4■□□□□ 0.86
CSNK1A1-202ENST00000377843 ROCK1Q13464 1354 aa20.39■□□□□ 0.86
CSNK1A1-202ENST00000377843 USP19O94966 1318 aa20.39■□□□□ 0.86
CSNK1A1-202ENST00000377843 CARD11Q9BXL7 1154 aa20.39■□□□□ 0.85
CSNK1A1-202ENST00000377843 PARD3Q8TEW0 1356 aa20.38■□□□□ 0.85
CSNK1A1-202ENST00000377843 ABCC5O15440 1437 aa20.38■□□□□ 0.85
CSNK1A1-202ENST00000377843 ZNF644Q9H582 1327 aaPredicted RBP20.37■□□□□ 0.85
CSNK1A1-202ENST00000377843 CHD1O14646 1710 aa20.37■□□□□ 0.85
CSNK1A1-202ENST00000377843 PRG4Q92954 1404 aaPredicted RBP20.37■□□□□ 0.85
CSNK1A1-202ENST00000377843 NAP1L5Q96NT1 182 aaPredicted RBP20.37■□□□□ 0.85
CSNK1A1-202ENST00000377843 ARXQ96QS3 562 aa20.36■□□□□ 0.85
CSNK1A1-202ENST00000377843 NUP153P49790 1475 aaKnown RBP20.35■□□□□ 0.85
CSNK1A1-202ENST00000377843 RALGAPBQ86X10 1494 aa20.34■□□□□ 0.85
CSNK1A1-202ENST00000377843 E9PCH4 1651 aa20.34■□□□□ 0.85
CSNK1A1-202ENST00000377843 BLMP54132 1417 aaPredicted RBP20.34■□□□□ 0.85
CSNK1A1-202ENST00000377843 CARMIL2Q6F5E8 1435 aa20.33■□□□□ 0.85
CSNK1A1-202ENST00000377843 SLKQ9H2G2 1235 aaPredicted RBP20.33■□□□□ 0.85
CSNK1A1-202ENST00000377843 XRCC6P12956 609 aaKnown RBP eCLIP20.32■□□□□ 0.847e-6■□□□□ 8.8
CSNK1A1-202ENST00000377843 HSP90AA2PQ14568 343 aaPredicted RBP20.32■□□□□ 0.84
CSNK1A1-202ENST00000377843 L1TD1Q5T7N2 865 aaKnown RBP20.32■□□□□ 0.84
CSNK1A1-202ENST00000377843 UHRF1BP1Q6BDS2 1440 aa20.32■□□□□ 0.84
CSNK1A1-202ENST00000377843 SEC24BO95487 1268 aa20.32■□□□□ 0.84
CSNK1A1-202ENST00000377843 KIAA1107Q9UPP5 1409 aa20.31■□□□□ 0.84
CSNK1A1-202ENST00000377843 PANK2Q9BZ23 570 aa20.31■□□□□ 0.84
CSNK1A1-202ENST00000377843 PNNQ9H307 717 aaKnown RBP20.3■□□□□ 0.84
CSNK1A1-202ENST00000377843 PER1O15534 1290 aaPredicted RBP20.3■□□□□ 0.84
CSNK1A1-202ENST00000377843 PKD2Q13563 968 aa20.29■□□□□ 0.84
CSNK1A1-202ENST00000377843 CLCN1P35523 988 aa20.29■□□□□ 0.84
CSNK1A1-202ENST00000377843 ERCC6L2Q5T890 1561 aa20.29■□□□□ 0.84
CSNK1A1-202ENST00000377843 RRP9O43818 475 aaKnown RBP20.28■□□□□ 0.84
CSNK1A1-202ENST00000377843 ANTXR1Q9H6X2 564 aa20.28■□□□□ 0.84
CSNK1A1-202ENST00000377843 DNMT1P26358 1616 aaKnown RBP20.27■□□□□ 0.84
CSNK1A1-202ENST00000377843 HSP90AA1P07900 732 aaKnown RBP20.27■□□□□ 0.83
CSNK1A1-202ENST00000377843 CC2D1BQ5T0F9 858 aaKnown RBP20.27■□□□□ 0.83
CSNK1A1-202ENST00000377843 RAPGEF6Q8TEU7 1601 aa20.26■□□□□ 0.83
CSNK1A1-202ENST00000377843 ZMYM4Q5VZL5 1548 aa20.26■□□□□ 0.83
CSNK1A1-202ENST00000377843 DUSP27Q5VZP5 1158 aa20.26■□□□□ 0.83
CSNK1A1-202ENST00000377843 KDM2AQ9Y2K7 1162 aa20.26■□□□□ 0.83
CSNK1A1-202ENST00000377843 FSD2A1L4K1 749 aa20.25■□□□□ 0.83
CSNK1A1-202ENST00000377843 PTPRGP23470 1445 aa20.25■□□□□ 0.83
CSNK1A1-202ENST00000377843 PLEKHH1Q9ULM0 1364 aa20.23■□□□□ 0.83
CSNK1A1-202ENST00000377843 ZNF777Q9ULD5 760 aaPredicted RBP20.22■□□□□ 0.83
CSNK1A1-202ENST00000377843 INSRP06213 1382 aa20.22■□□□□ 0.83
CSNK1A1-202ENST00000377843 IGHDP01880 384 aa20.21■□□□□ 0.83
CSNK1A1-202ENST00000377843 NLRP1Q9C000 1473 aa20.21■□□□□ 0.83
CSNK1A1-202ENST00000377843 GOLGA6L3A6NEY3 463 aa20.21■□□□□ 0.83
CSNK1A1-202ENST00000377843 ADAMTS8Q9UP79 889 aa20.21■□□□□ 0.83
CSNK1A1-202ENST00000377843 GZF1Q9H116 711 aaPredicted RBP20.2■□□□□ 0.82
CSNK1A1-202ENST00000377843 PLEKHH2Q8IVE3 1493 aa20.2■□□□□ 0.82
CSNK1A1-202ENST00000377843 BECN1Q14457 450 aa20.17■□□□□ 0.82
CSNK1A1-202ENST00000377843 ERBB4Q15303 1308 aa20.16■□□□□ 0.82
CSNK1A1-202ENST00000377843 ATP10BO94823 1461 aa20.15■□□□□ 0.82
CSNK1A1-202ENST00000377843 ZNF521Q96K83 1311 aa20.15■□□□□ 0.82
CSNK1A1-202ENST00000377843 PLEKHD1A6NEE1 506 aa20.15■□□□□ 0.82
CSNK1A1-202ENST00000377843 TBC1D2Q9BYX2 928 aa20.14■□□□□ 0.81
CSNK1A1-202ENST00000377843 ARHGEF12Q9NZN5 1544 aa20.13■□□□□ 0.81
CSNK1A1-202ENST00000377843 VIRMAQ69YN4 1812 aaKnown RBP20.13■□□□□ 0.81
CSNK1A1-202ENST00000377843 EIF3AQ14152 1382 aaKnown RBP20.12■□□□□ 0.81
CSNK1A1-202ENST00000377843 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.12■□□□□ 0.81
CSNK1A1-202ENST00000377843 BCAR3O75815 825 aa20.11■□□□□ 0.81
CSNK1A1-202ENST00000377843 MCM4P33991 863 aa20.11■□□□□ 0.81
CSNK1A1-202ENST00000377843 SPRYD3Q8NCJ5 442 aa20.11■□□□□ 0.81
CSNK1A1-202ENST00000377843 PANK3Q9H999 370 aa20.11■□□□□ 0.81
CSNK1A1-202ENST00000377843 ABCA8O94911 1581 aa20.11■□□□□ 0.81
CSNK1A1-202ENST00000377843 SPINK5Q9NQ38 1064 aaPredicted RBP20.1■□□□□ 0.81
CSNK1A1-202ENST00000377843 CFDP1Q9UEE9 299 aaPredicted RBP20.1■□□□□ 0.81
CSNK1A1-202ENST00000377843 TROQ12816 1431 aaPredicted RBP20.1■□□□□ 0.81
CSNK1A1-202ENST00000377843 GOLGA2Q08379 1002 aa20.1■□□□□ 0.81
CSNK1A1-202ENST00000377843 DISP3Q9P2K9 1392 aa20.1■□□□□ 0.81
CSNK1A1-202ENST00000377843 SLFN5Q08AF3 891 aa20.08■□□□□ 0.81
CSNK1A1-202ENST00000377843 NBPF1Q3BBV0 1214 aa20.08■□□□□ 0.81
CSNK1A1-202ENST00000377843 ESPNB1AK53 854 aa20.07■□□□□ 0.8
CSNK1A1-202ENST00000377843 TBC1D32Q96NH3 1257 aa20.06■□□□□ 0.8
CSNK1A1-202ENST00000377843 CAMSAP2Q08AD1 1489 aa20.06■□□□□ 0.8
CSNK1A1-202ENST00000377843 TRAK2O60296 914 aa20.05■□□□□ 0.8
CSNK1A1-202ENST00000377843 COL17A1Q9UMD9 1497 aaPredicted RBP20.04■□□□□ 0.8
CSNK1A1-202ENST00000377843 MRE11P49959 708 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms