RNA–Protein interactions for RNA: ENST00000377617.7

ATXN2-201, Transcript of ataxin 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATXN2, Length 4,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-201ENST00000377617 SF3A1Q15459 793 aaKnown RBP20.62■□□□□ 0.89
ATXN2-201ENST00000377617 CHMP4CQ96CF2 233 aa20.62■□□□□ 0.89
ATXN2-201ENST00000377617 A0A0G2JS52 829 aa20.62■□□□□ 0.89
ATXN2-201ENST00000377617 HSP90B1P14625 803 aaKnown RBP20.62■□□□□ 0.89
ATXN2-201ENST00000377617 ACBD3Q9H3P7 528 aa20.62■□□□□ 0.89
ATXN2-201ENST00000377617 ISY1Q9ULR0 285 aaKnown RBP20.62■□□□□ 0.89
ATXN2-201ENST00000377617 GPATCH3Q96I76 525 aa20.61■□□□□ 0.89
ATXN2-201ENST00000377617 NASPP49321 788 aaPredicted RBP20.61■□□□□ 0.89
ATXN2-201ENST00000377617 TPM1P09493 284 aa20.6■□□□□ 0.89
ATXN2-201ENST00000377617 TSR1Q2NL82 804 aaKnown RBP20.6■□□□□ 0.89
ATXN2-201ENST00000377617 RTF1Q92541 710 aaKnown RBP20.59■□□□□ 0.89
ATXN2-201ENST00000377617 FOXD4L5Q5VV16 416 aaPredicted RBP20.59■□□□□ 0.89
ATXN2-201ENST00000377617 FOXD4L4Q8WXT5 416 aaPredicted RBP20.59■□□□□ 0.89
ATXN2-201ENST00000377617 PRKRIP1Q9H875 184 aaPredicted RBP20.59■□□□□ 0.89
ATXN2-201ENST00000377617 NOL8Q76FK4 1167 aaKnown RBP20.58■□□□□ 0.89
ATXN2-201ENST00000377617 HSP90B2PQ58FF3 399 aa20.57■□□□□ 0.88
ATXN2-201ENST00000377617 CRBNQ96SW2 442 aa20.57■□□□□ 0.88
ATXN2-201ENST00000377617 MYBBP1AQ9BQG0 1328 aaKnown RBP20.57■□□□□ 0.88
ATXN2-201ENST00000377617 HOMER1Q86YM7 354 aa20.57■□□□□ 0.88
ATXN2-201ENST00000377617 KIF15Q9NS87 1388 aa20.55■□□□□ 0.88
ATXN2-201ENST00000377617 MNS1Q8NEH6 495 aa20.54■□□□□ 0.88
ATXN2-201ENST00000377617 REC8O95072 547 aa20.53■□□□□ 0.88
ATXN2-201ENST00000377617 CCDC173Q0VFZ6 552 aa20.52■□□□□ 0.88
ATXN2-201ENST00000377617 CHMP7Q8WUX9 453 aaPredicted RBP20.52■□□□□ 0.88
ATXN2-201ENST00000377617 IFT57Q9NWB7 429 aa20.52■□□□□ 0.88
ATXN2-201ENST00000377617 TRAK2O60296 914 aa20.52■□□□□ 0.87
ATXN2-201ENST00000377617 STK31Q9BXU1 1019 aa20.52■□□□□ 0.87
ATXN2-201ENST00000377617 CEP89Q96ST8 783 aa20.51■□□□□ 0.87
ATXN2-201ENST00000377617 TAF3Q5VWG9 929 aa20.51■□□□□ 0.87
ATXN2-201ENST00000377617 E9PSI1 815 aa20.5■□□□□ 0.87
ATXN2-201ENST00000377617 H3BQV1 296 aa20.5■□□□□ 0.87
ATXN2-201ENST00000377617 IPO7O95373 1038 aaKnown RBP20.5■□□□□ 0.87
ATXN2-201ENST00000377617 IFFO2Q5TF58 517 aa20.5■□□□□ 0.87
ATXN2-201ENST00000377617 CDR1P51861 262 aa20.49■□□□□ 0.87
ATXN2-201ENST00000377617 NGEFQ8N5V2 710 aa20.49■□□□□ 0.87
ATXN2-201ENST00000377617 MPHOSPH9Q99550 1183 aa20.49■□□□□ 0.87
ATXN2-201ENST00000377617 SENP3Q9H4L4 574 aaPredicted RBP20.49■□□□□ 0.87
ATXN2-201ENST00000377617 PLIN1O60240 522 aa20.49■□□□□ 0.87
ATXN2-201ENST00000377617 CLSTN1O94985 981 aa20.49■□□□□ 0.87
ATXN2-201ENST00000377617 PKD2Q13563 968 aa20.49■□□□□ 0.87
ATXN2-201ENST00000377617 PLPPR3Q6T4P5 718 aa20.49■□□□□ 0.87
ATXN2-201ENST00000377617 SRPK2P78362 688 aaKnown RBP20.49■□□□□ 0.87
ATXN2-201ENST00000377617 ARHGAP35Q9NRY4 1499 aa20.48■□□□□ 0.87
ATXN2-201ENST00000377617 AK7Q96M32 723 aa20.48■□□□□ 0.87
ATXN2-201ENST00000377617 AAMPQ13685 434 aa20.48■□□□□ 0.87
ATXN2-201ENST00000377617 ZKSCAN2Q63HK3 967 aa20.48■□□□□ 0.87
ATXN2-201ENST00000377617 RDXP35241 583 aaKnown RBP20.47■□□□□ 0.87
ATXN2-201ENST00000377617 TPD52L1Q16890 204 aaPredicted RBP20.47■□□□□ 0.87
ATXN2-201ENST00000377617 ANKRD45Q5TZF3 282 aa20.47■□□□□ 0.87
ATXN2-201ENST00000377617 FAM184AQ8NB25 1140 aa20.47■□□□□ 0.87
ATXN2-201ENST00000377617 L3MBTL2Q969R5 705 aa20.47■□□□□ 0.87
ATXN2-201ENST00000377617 CREBRFQ8IUR6 639 aa20.46■□□□□ 0.87
ATXN2-201ENST00000377617 PLEKHG5O94827 1062 aa20.46■□□□□ 0.87
ATXN2-201ENST00000377617 BAZ1BQ9UIG0 1483 aaKnown RBP20.46■□□□□ 0.87
ATXN2-201ENST00000377617 RASSF8Q8NHQ8 419 aa20.46■□□□□ 0.87
ATXN2-201ENST00000377617 FMN1Q68DA7 1419 aa20.46■□□□□ 0.87
ATXN2-201ENST00000377617 H0YHG0 523 aa20.46■□□□□ 0.87
ATXN2-201ENST00000377617 HDGFL2Q7Z4V5 671 aaPredicted RBP20.45■□□□□ 0.86
ATXN2-201ENST00000377617 C22orf23Q9BZE7 217 aa20.45■□□□□ 0.86
ATXN2-201ENST00000377617 FRAT2O75474 233 aaPredicted RBP20.44■□□□□ 0.86
ATXN2-201ENST00000377617 MBD3O95983 291 aa20.44■□□□□ 0.86
ATXN2-201ENST00000377617 RRP12Q5JTH9 1297 aaKnown RBP20.44■□□□□ 0.86
ATXN2-201ENST00000377617 RUFY1Q96T51 708 aa20.44■□□□□ 0.86
ATXN2-201ENST00000377617 FOXD4L6Q3SYB3 417 aaPredicted RBP20.44■□□□□ 0.86
ATXN2-201ENST00000377617 FOXD4L3Q6VB84 417 aaPredicted RBP20.44■□□□□ 0.86
ATXN2-201ENST00000377617 RBM10P98175 930 aaKnown RBP20.44■□□□□ 0.86
ATXN2-201ENST00000377617 LMOD3Q0VAK6 560 aa20.44■□□□□ 0.86
ATXN2-201ENST00000377617 UBE2Q2Q8WVN8 375 aa20.44■□□□□ 0.86
ATXN2-201ENST00000377617 ERCC4Q92889 916 aaPredicted RBP20.43■□□□□ 0.86
ATXN2-201ENST00000377617 DHX57Q6P158 1386 aaKnown RBP20.43■□□□□ 0.86
ATXN2-201ENST00000377617 PATL2C9JE40 543 aaKnown RBP20.43■□□□□ 0.86
ATXN2-201ENST00000377617 MCTP1Q6DN14 999 aa20.43■□□□□ 0.86
ATXN2-201ENST00000377617 COG6Q9Y2V7 657 aa20.43■□□□□ 0.86
ATXN2-201ENST00000377617 CCDC191Q8NCU4 936 aa20.42■□□□□ 0.86
ATXN2-201ENST00000377617 KANK4Q5T7N3 995 aaPredicted RBP20.42■□□□□ 0.86
ATXN2-201ENST00000377617 SASS6Q6UVJ0 657 aa20.42■□□□□ 0.86
ATXN2-201ENST00000377617 ESPNB1AK53 854 aa20.42■□□□□ 0.86
ATXN2-201ENST00000377617 CCDC146Q8IYE0 955 aa20.42■□□□□ 0.86
ATXN2-201ENST00000377617 PES1O00541 588 aaKnown RBP20.41■□□□□ 0.86
ATXN2-201ENST00000377617 DDX19BQ9UMR2 479 aa20.41■□□□□ 0.86
ATXN2-201ENST00000377617 SPAG9O60271 1321 aaKnown RBP20.4■□□□□ 0.86
ATXN2-201ENST00000377617 PAK3O75914 559 aaPredicted RBP20.4■□□□□ 0.86
ATXN2-201ENST00000377617 LEKR1Q6ZMV7 388 aa20.4■□□□□ 0.86
ATXN2-201ENST00000377617 ANKRD20A12PQ8NF67 263 aa20.4■□□□□ 0.86
ATXN2-201ENST00000377617 BICD2Q8TD16 824 aa20.39■□□□□ 0.85
ATXN2-201ENST00000377617 LETM1O95202 739 aaPredicted RBP20.39■□□□□ 0.85
ATXN2-201ENST00000377617 DCTN1Q14203 1278 aa20.38■□□□□ 0.85
ATXN2-201ENST00000377617 EIF3AQ14152 1382 aaKnown RBP20.37■□□□□ 0.85
ATXN2-201ENST00000377617 KANK1Q14678 1352 aa20.37■□□□□ 0.85
ATXN2-201ENST00000377617 FOXD1Q16676 465 aa20.36■□□□□ 0.85
ATXN2-201ENST00000377617 ZKSCAN1P17029 563 aaPredicted RBP20.36■□□□□ 0.85
ATXN2-201ENST00000377617 RUFY2Q8WXA3 655 aa20.36■□□□□ 0.85
ATXN2-201ENST00000377617 RILPL2Q969X0 211 aa20.36■□□□□ 0.85
ATXN2-201ENST00000377617 GORABQ5T7V8 394 aa20.35■□□□□ 0.85
ATXN2-201ENST00000377617 SLC4A10Q6U841 1118 aa20.35■□□□□ 0.85
ATXN2-201ENST00000377617 USP8P40818 1118 aa20.35■□□□□ 0.85
ATXN2-201ENST00000377617 HOOK1Q9UJC3 728 aaKnown RBP20.35■□□□□ 0.85
ATXN2-201ENST00000377617 CPLX2Q6PUV4 134 aaKnown RBP20.34■□□□□ 0.85
ATXN2-201ENST00000377617 RNF214Q8ND24 703 aa20.34■□□□□ 0.85
ATXN2-201ENST00000377617 PDCL2Q8N4E4 241 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms