RNA–Protein interactions for RNA: ENST00000377612.8

COMMD6-202, Transcript of COMM domain containing 6, humanhuman

TSL 5

Gene COMMD6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-202ENST00000377612 CAMSAP1Q5T5Y3 1602 aa28.2■■■□□ 2.1
COMMD6-202ENST00000377612 RSPH4AQ5TD94 716 aa28.19■■■□□ 2.1
COMMD6-202ENST00000377612 NCOA1Q15788 1441 aa28.17■■■□□ 2.1
COMMD6-202ENST00000377612 TCOF1Q13428 1488 aaKnown RBP28.16■■■□□ 2.1
COMMD6-202ENST00000377612 SHANK2Q9UPX8 1470 aa28.15■■■□□ 2.1
COMMD6-202ENST00000377612 FGD6Q6ZV73 1430 aa28.14■■■□□ 2.1
COMMD6-202ENST00000377612 KIF3BO15066 747 aa28.13■■■□□ 2.09
COMMD6-202ENST00000377612 PZPP20742 1482 aa28.12■■■□□ 2.09
COMMD6-202ENST00000377612 POLR1AO95602 1720 aaPredicted RBP28.12■■■□□ 2.09
COMMD6-202ENST00000377612 CFAP65Q6ZU64 1925 aaKnown RBP28.12■■■□□ 2.09
COMMD6-202ENST00000377612 ABCC5O15440 1437 aa28.11■■■□□ 2.09
COMMD6-202ENST00000377612 ABCC3O15438 1527 aa28.11■■■□□ 2.09
COMMD6-202ENST00000377612 DUOX2Q9NRD8 1548 aa28.1■■■□□ 2.09
COMMD6-202ENST00000377612 TSPY4P0CV99 314 aa28.09■■■□□ 2.09
COMMD6-202ENST00000377612 TSPY10P0CW01 314 aa28.09■■■□□ 2.09
COMMD6-202ENST00000377612 PPP6R1Q9UPN7 881 aa28.09■■■□□ 2.09
COMMD6-202ENST00000377612 DEPDC5O75140 1603 aa28.09■■■□□ 2.09
COMMD6-202ENST00000377612 DAPK1P53355 1430 aa28.08■■■□□ 2.09
COMMD6-202ENST00000377612 PTPRTO14522 1441 aa28.07■■■□□ 2.08
COMMD6-202ENST00000377612 PRDM15P57071 1507 aaPredicted RBP28.06■■■□□ 2.08
COMMD6-202ENST00000377612 APLP2Q06481 763 aa28.05■■■□□ 2.08
COMMD6-202ENST00000377612 A2ML1A8K2U0 1454 aa28.04■■■□□ 2.08
COMMD6-202ENST00000377612 PLA2R1Q13018 1463 aa28.04■■■□□ 2.08
COMMD6-202ENST00000377612 FBXO41Q8TF61 875 aa28.04■■■□□ 2.08
COMMD6-202ENST00000377612 LTBP4Q8N2S1 1624 aa28.02■■■□□ 2.08
COMMD6-202ENST00000377612 SPATA31D1Q6ZQQ2 1576 aa28.01■■■□□ 2.07
COMMD6-202ENST00000377612 KIF15Q9NS87 1388 aa27.99■■■□□ 2.07
COMMD6-202ENST00000377612 NEURL4Q96JN8 1562 aa27.99■■■□□ 2.07
COMMD6-202ENST00000377612 FBXO31Q5XUX0 539 aaPredicted RBP27.98■■■□□ 2.07
COMMD6-202ENST00000377612 TNRQ92752 1358 aa27.98■■■□□ 2.07
COMMD6-202ENST00000377612 ERBINQ96RT1 1412 aa27.97■■■□□ 2.07
COMMD6-202ENST00000377612 WASHC2CQ9Y4E1 1318 aa27.96■■■□□ 2.07
COMMD6-202ENST00000377612 CERKQ8TCT0 537 aa27.94■■■□□ 2.06
COMMD6-202ENST00000377612 DMRT2Q9Y5R5 561 aa27.94■■■□□ 2.06
COMMD6-202ENST00000377612 ERVK-7P63135 1459 aa27.93■■■□□ 2.06
COMMD6-202ENST00000377612 ADGRL2O95490 1459 aa27.92■■■□□ 2.06
COMMD6-202ENST00000377612 UBR1Q8IWV7 1749 aa27.92■■■□□ 2.06
COMMD6-202ENST00000377612 NCKAP5LQ9HCH0 1330 aa27.92■■■□□ 2.06
COMMD6-202ENST00000377612 VWDEQ8N2E2 1590 aa27.9■■■□□ 2.06
COMMD6-202ENST00000377612 NLRP1Q9C000 1473 aa27.89■■■□□ 2.06
COMMD6-202ENST00000377612 UGGT1Q9NYU2 1555 aa27.88■■■□□ 2.05
COMMD6-202ENST00000377612 RRP7BPQ9NSQ0 103 aa27.86■■■□□ 2.05
COMMD6-202ENST00000377612 ANKRD30AQ9BXX3 1397 aa27.83■■■□□ 2.05
COMMD6-202ENST00000377612 CHIC2Q9UKJ5 165 aa27.82■■■□□ 2.04
COMMD6-202ENST00000377612 LMTK2Q8IWU2 1503 aa27.82■■■□□ 2.04
COMMD6-202ENST00000377612 IQGAP1P46940 1657 aa27.81■■■□□ 2.04
COMMD6-202ENST00000377612 PIK3C2BO00750 1634 aa27.81■■■□□ 2.04
COMMD6-202ENST00000377612 ARHGAP31Q2M1Z3 1444 aa27.8■■■□□ 2.04
COMMD6-202ENST00000377612 EFCAB6Q5THR3 1501 aa27.79■■■□□ 2.04
COMMD6-202ENST00000377612 PKD2Q13563 968 aa27.79■■■□□ 2.04
COMMD6-202ENST00000377612 IQSEC2Q5JU85 1478 aa27.78■■■□□ 2.04
COMMD6-202ENST00000377612 ZNF335Q9H4Z2 1342 aaPredicted RBP27.77■■■□□ 2.04
COMMD6-202ENST00000377612 UNC13BO14795 1591 aa27.77■■■□□ 2.04
COMMD6-202ENST00000377612 SYNMO15061 1565 aa27.77■■■□□ 2.04
COMMD6-202ENST00000377612 STRCP1A6NGW2 1772 aa27.76■■■□□ 2.03
COMMD6-202ENST00000377612 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.76■■■□□ 2.03
COMMD6-202ENST00000377612 FAM50AQ14320 339 aaKnown RBP27.75■■■□□ 2.03
COMMD6-202ENST00000377612 GCC2Q8IWJ2 1684 aa27.75■■■□□ 2.03
COMMD6-202ENST00000377612 MYO5BQ9ULV0 1848 aa27.74■■■□□ 2.03
COMMD6-202ENST00000377612 TET3O43151 1660 aa27.73■■■□□ 2.03
COMMD6-202ENST00000377612 KDM5AP29375 1690 aaKnown RBP27.73■■■□□ 2.03
COMMD6-202ENST00000377612 MED14O60244 1454 aa27.72■■■□□ 2.03
COMMD6-202ENST00000377612 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.69■■■□□ 2.02
COMMD6-202ENST00000377612 ANKRD50Q9ULJ7 1429 aa27.68■■■□□ 2.02
COMMD6-202ENST00000377612 SLIT1O75093 1534 aa27.67■■■□□ 2.02
COMMD6-202ENST00000377612 ARHGAP23Q9P227 1491 aa27.66■■■□□ 2.02
COMMD6-202ENST00000377612 NPHP4O75161 1426 aaPredicted RBP27.66■■■□□ 2.02
COMMD6-202ENST00000377612 E9PCH4 1651 aa27.65■■■□□ 2.02
COMMD6-202ENST00000377612 KANK1Q14678 1352 aa27.65■■■□□ 2.02
COMMD6-202ENST00000377612 IQGAP3Q86VI3 1631 aa27.64■■■□□ 2.02
COMMD6-202ENST00000377612 PPARGC1BQ86YN6 1023 aaKnown RBP27.64■■■□□ 2.02
COMMD6-202ENST00000377612 THEMISQ8N1K5 641 aaPredicted RBP27.63■■■□□ 2.01
COMMD6-202ENST00000377612 NOS1P29475 1434 aa27.61■■■□□ 2.01
COMMD6-202ENST00000377612 ADGRB3O60242 1522 aa27.61■■■□□ 2.01
COMMD6-202ENST00000377612 CPS1P31327 1500 aa27.61■■■□□ 2.01
COMMD6-202ENST00000377612 SCAF11Q99590 1463 aaKnown RBP27.59■■■□□ 2.01
COMMD6-202ENST00000377612 ANKLE2Q86XL3 938 aa27.59■■■□□ 2.01
COMMD6-202ENST00000377612 XIRP1Q702N8 1843 aaKnown RBP27.59■■■□□ 2.01
COMMD6-202ENST00000377612 ROCK1Q13464 1354 aa27.59■■■□□ 2.01
COMMD6-202ENST00000377612 RPRD2Q5VT52 1461 aaKnown RBP27.56■■■□□ 2
COMMD6-202ENST00000377612 ALKQ9UM73 1620 aa27.54■■■□□ 2
COMMD6-202ENST00000377612 RRBP1Q9P2E9 1410 aaKnown RBP27.51■■□□□ 1.99
COMMD6-202ENST00000377612 TMEM131LA2VDJ0 1609 aa27.51■■□□□ 1.99
COMMD6-202ENST00000377612 LTKP29376 864 aa27.48■■□□□ 1.99
COMMD6-202ENST00000377612 TMEM2Q9UHN6 1383 aa27.48■■□□□ 1.99
COMMD6-202ENST00000377612 SPHKAPQ2M3C7 1700 aa27.47■■□□□ 1.99
COMMD6-202ENST00000377612 IDI1Q13907 227 aa27.46■■□□□ 1.99
COMMD6-202ENST00000377612 ITGAEP38570 1179 aa27.44■■□□□ 1.98
COMMD6-202ENST00000377612 LRRC7Q96NW7 1537 aa27.44■■□□□ 1.98
COMMD6-202ENST00000377612 UBAP1LF5GYI3 381 aa27.4■■□□□ 1.98
COMMD6-202ENST00000377612 TXNDC2Q86VQ3 553 aa27.39■■□□□ 1.98
COMMD6-202ENST00000377612 ZFYVE9O95405 1425 aa27.38■■□□□ 1.97
COMMD6-202ENST00000377612 NWD1Q149M9 1564 aa27.37■■□□□ 1.97
COMMD6-202ENST00000377612 CHD2O14647 1828 aaKnown RBP27.34■■□□□ 1.97
COMMD6-202ENST00000377612 STAG3Q9UJ98 1225 aa27.33■■□□□ 1.97
COMMD6-202ENST00000377612 NUP155O75694 1391 aa27.33■■□□□ 1.97
COMMD6-202ENST00000377612 NAIPQ13075 1403 aa27.33■■□□□ 1.96
COMMD6-202ENST00000377612 SLC52A1Q9NWF4 448 aa27.32■■□□□ 1.96
COMMD6-202ENST00000377612 EID1Q9Y6B2 187 aa27.3■■□□□ 1.96
COMMD6-202ENST00000377612 CLTCL1P53675 1640 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms