RNA–Protein interactions for RNA: ENST00000377447.7

CBWD1-204, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CBWD1, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-204ENST00000377447 PLEKHH2Q8IVE3 1493 aa13.73□□□□□ -0.21
CBWD1-204ENST00000377447 CCDC184Q52MB2 194 aa13.73□□□□□ -0.21
CBWD1-204ENST00000377447 PRKRIP1Q9H875 184 aaPredicted RBP13.73□□□□□ -0.21
CBWD1-204ENST00000377447 CCDC144AA2RUR9 1427 aa13.72□□□□□ -0.21
CBWD1-204ENST00000377447 AFAP1Q8N556 730 aa13.72□□□□□ -0.21
CBWD1-204ENST00000377447 BCANQ96GW7 911 aa13.71□□□□□ -0.21
CBWD1-204ENST00000377447 MYT1LQ9UL68 1186 aa13.71□□□□□ -0.21
CBWD1-204ENST00000377447 ABCA9Q8IUA7 1624 aa13.71□□□□□ -0.21
CBWD1-204ENST00000377447 DIP2BQ9P265 1576 aa13.71□□□□□ -0.21
CBWD1-204ENST00000377447 FAM9BQ8IZU0 186 aa13.71□□□□□ -0.21
CBWD1-204ENST00000377447 FKBP8Q14318 412 aa13.7□□□□□ -0.22
CBWD1-204ENST00000377447 MRS2Q9HD23 443 aa13.7□□□□□ -0.22
CBWD1-204ENST00000377447 TRAPPC8Q9Y2L5 1435 aa13.69□□□□□ -0.22
CBWD1-204ENST00000377447 MAST1Q9Y2H9 1570 aa13.69□□□□□ -0.22
CBWD1-204ENST00000377447 POLR1AO95602 1720 aaPredicted RBP13.69□□□□□ -0.22
CBWD1-204ENST00000377447 ST20-MTHFSA0A0A6YYL1 179 aa13.68□□□□□ -0.22
CBWD1-204ENST00000377447 SPAG9O60271 1321 aaKnown RBP13.68□□□□□ -0.22
CBWD1-204ENST00000377447 BCORL1Q5H9F3 1711 aa13.68□□□□□ -0.22
CBWD1-204ENST00000377447 ROCK2O75116 1388 aaKnown RBP13.68□□□□□ -0.22
CBWD1-204ENST00000377447 KDM5CP41229 1560 aa13.67□□□□□ -0.22
CBWD1-204ENST00000377447 UHRF1BP1Q6BDS2 1440 aa13.67□□□□□ -0.22
CBWD1-204ENST00000377447 FANCAO15360 1455 aa13.67□□□□□ -0.22
CBWD1-204ENST00000377447 PLXNC1O60486 1568 aa13.67□□□□□ -0.22
CBWD1-204ENST00000377447 RALGAPBQ86X10 1494 aa13.67□□□□□ -0.22
CBWD1-204ENST00000377447 TSPOAP1O95153 1857 aa13.67□□□□□ -0.22
CBWD1-204ENST00000377447 DUOX2Q9NRD8 1548 aa13.67□□□□□ -0.22
CBWD1-204ENST00000377447 NEFLP07196 543 aa13.66□□□□□ -0.22
CBWD1-204ENST00000377447 ABCC1P33527 1531 aa13.66□□□□□ -0.22
CBWD1-204ENST00000377447 GLI2P10070 1586 aa13.66□□□□□ -0.22
CBWD1-204ENST00000377447 KIF13AQ9H1H9 1805 aa13.66□□□□□ -0.22
CBWD1-204ENST00000377447 UNC13BO14795 1591 aa13.66□□□□□ -0.22
CBWD1-204ENST00000377447 MAP3K4Q9Y6R4 1608 aa13.64□□□□□ -0.23
CBWD1-204ENST00000377447 PLA2R1Q13018 1463 aa13.64□□□□□ -0.23
CBWD1-204ENST00000377447 ERBINQ96RT1 1412 aa13.64□□□□□ -0.23
CBWD1-204ENST00000377447 NBPF1Q3BBV0 1214 aa13.63□□□□□ -0.23
CBWD1-204ENST00000377447 IQGAP3Q86VI3 1631 aa13.63□□□□□ -0.23
CBWD1-204ENST00000377447 RAPGEF3O95398 923 aa13.61□□□□□ -0.23
CBWD1-204ENST00000377447 SCAPERQ9BY12 1400 aa13.61□□□□□ -0.23
CBWD1-204ENST00000377447 ADGRL1O94910 1474 aa13.6□□□□□ -0.23
CBWD1-204ENST00000377447 PRAG1Q86YV5 1406 aa13.6□□□□□ -0.23
CBWD1-204ENST00000377447 ARAP3Q8WWN8 1544 aa13.59□□□□□ -0.23
CBWD1-204ENST00000377447 DHX29Q7Z478 1369 aaKnown RBP13.59□□□□□ -0.23
CBWD1-204ENST00000377447 ARID4BQ4LE39 1312 aaPredicted RBP13.59□□□□□ -0.23
CBWD1-204ENST00000377447 KIF3BO15066 747 aa13.59□□□□□ -0.23
CBWD1-204ENST00000377447 A2MP01023 1474 aa13.59□□□□□ -0.23
CBWD1-204ENST00000377447 PPRC1Q5VV67 1664 aaKnown RBP13.58□□□□□ -0.23
CBWD1-204ENST00000377447 ZFYVE16Q7Z3T8 1539 aa13.58□□□□□ -0.24
CBWD1-204ENST00000377447 SENP3-EIF4A1A0A087X0R7 540 aa13.57□□□□□ -0.24
CBWD1-204ENST00000377447 MAGI2Q86UL8 1455 aa13.57□□□□□ -0.24
CBWD1-204ENST00000377447 IRX6P78412 446 aaPredicted RBP13.56□□□□□ -0.24
CBWD1-204ENST00000377447 TRPM1Q7Z4N2 1603 aa13.56□□□□□ -0.24
CBWD1-204ENST00000377447 RTEL1-TNFRSF6BF6WH68 1400 aa13.56□□□□□ -0.24
CBWD1-204ENST00000377447 NEO1Q92859 1461 aa13.56□□□□□ -0.24
CBWD1-204ENST00000377447 ATP7AQ04656 1500 aa13.54□□□□□ -0.24
CBWD1-204ENST00000377447 COL17A1Q9UMD9 1497 aaPredicted RBP13.54□□□□□ -0.24
CBWD1-204ENST00000377447 TMC1Q8TDI8 760 aa13.54□□□□□ -0.24
CBWD1-204ENST00000377447 E9PCH4 1651 aa13.53□□□□□ -0.24
CBWD1-204ENST00000377447 KANK1Q14678 1352 aa13.53□□□□□ -0.24
CBWD1-204ENST00000377447 ATP10AO60312 1499 aa13.53□□□□□ -0.24
CBWD1-204ENST00000377447 CFAP74Q9C0B2 1584 aa13.52□□□□□ -0.25
CBWD1-204ENST00000377447 POGZQ7Z3K3 1410 aa13.5□□□□□ -0.25
CBWD1-204ENST00000377447 ZBED9Q6R2W3 1325 aa13.5□□□□□ -0.25
CBWD1-204ENST00000377447 INO80Q9ULG1 1556 aaPredicted RBP13.49□□□□□ -0.25
CBWD1-204ENST00000377447 ZNF518AQ6AHZ1 1483 aa13.49□□□□□ -0.25
CBWD1-204ENST00000377447 GPRASP1Q5JY77 1395 aa13.49□□□□□ -0.25
CBWD1-204ENST00000377447 TESK2Q96S53 571 aa13.48□□□□□ -0.25
CBWD1-204ENST00000377447 DISP3Q9P2K9 1392 aa13.48□□□□□ -0.25
CBWD1-204ENST00000377447 CFAP65Q6ZU64 1925 aaKnown RBP13.48□□□□□ -0.25
CBWD1-204ENST00000377447 SPHKAPQ2M3C7 1700 aa13.48□□□□□ -0.25
CBWD1-204ENST00000377447 EIF2AK4Q9P2K8 1649 aaKnown RBP13.47□□□□□ -0.25
CBWD1-204ENST00000377447 TMF1P82094 1093 aa13.47□□□□□ -0.25
CBWD1-204ENST00000377447 DEPDC5O75140 1603 aa13.47□□□□□ -0.25
CBWD1-204ENST00000377447 CC2D1BQ5T0F9 858 aaKnown RBP13.46□□□□□ -0.25
CBWD1-204ENST00000377447 GGT6Q6P531 493 aa13.46□□□□□ -0.25
CBWD1-204ENST00000377447 TRPM2O94759 1503 aa13.46□□□□□ -0.25
CBWD1-204ENST00000377447 PRDM15P57071 1507 aaPredicted RBP13.46□□□□□ -0.25
CBWD1-204ENST00000377447 PNISRQ8TF01 805 aaKnown RBP13.46□□□□□ -0.26
CBWD1-204ENST00000377447 CLTCL1P53675 1640 aa13.45□□□□□ -0.26
CBWD1-204ENST00000377447 TET3O43151 1660 aa13.45□□□□□ -0.26
CBWD1-204ENST00000377447 MYBBP1AQ9BQG0 1328 aaKnown RBP13.45□□□□□ -0.26
CBWD1-204ENST00000377447 RALBP1Q15311 655 aa13.45□□□□□ -0.26
CBWD1-204ENST00000377447 PANK3Q9H999 370 aa13.45□□□□□ -0.26
CBWD1-204ENST00000377447 TSHZ2Q9NRE2 1034 aa13.45□□□□□ -0.26
CBWD1-204ENST00000377447 KIDINS220Q9ULH0 1771 aa13.45□□□□□ -0.26
CBWD1-204ENST00000377447 FRMPD1Q5SYB0 1578 aa13.44□□□□□ -0.26
CBWD1-204ENST00000377447 RICTORQ6R327 1708 aa13.44□□□□□ -0.26
CBWD1-204ENST00000377447 CHGAP10645 457 aaKnown RBP13.44□□□□□ -0.26
CBWD1-204ENST00000377447 YEATS2Q9ULM3 1422 aa13.44□□□□□ -0.26
CBWD1-204ENST00000377447 CEP152O94986 1710 aa13.44□□□□□ -0.26
CBWD1-204ENST00000377447 PTPRTO14522 1441 aa13.44□□□□□ -0.26
CBWD1-204ENST00000377447 KTN1Q86UP2 1357 aaKnown RBP13.43□□□□□ -0.26
CBWD1-204ENST00000377447 UGGT1Q9NYU2 1555 aa13.43□□□□□ -0.26
CBWD1-204ENST00000377447 PER1O15534 1290 aaPredicted RBP13.42□□□□□ -0.26
CBWD1-204ENST00000377447 LAMC1P11047 1609 aa13.42□□□□□ -0.26
CBWD1-204ENST00000377447 SALL2Q9Y467 1007 aaPredicted RBP13.42□□□□□ -0.26
CBWD1-204ENST00000377447 MLH3Q9UHC1 1453 aa13.41□□□□□ -0.26
CBWD1-204ENST00000377447 MADDQ8WXG6 1647 aa13.41□□□□□ -0.26
CBWD1-204ENST00000377447 NLRP13Q86W25 1043 aa13.4□□□□□ -0.26
CBWD1-204ENST00000377447 BRD4O60885 1362 aaPredicted RBP13.4□□□□□ -0.26
CBWD1-204ENST00000377447 HECW2Q9P2P5 1572 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms