RNA–Protein interactions for RNA: ENST00000377135.8

IRF3-202, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,442 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-202ENST00000377135 CHIC2Q9UKJ5 165 aa27.62■■■□□ 2.01
IRF3-202ENST00000377135 STRCQ7RTU9 1775 aa27.61■■■□□ 2.01
IRF3-202ENST00000377135 FAM50AQ14320 339 aaKnown RBP27.6■■■□□ 2.01
IRF3-202ENST00000377135 CERKQ8TCT0 537 aa27.59■■■□□ 2.01
IRF3-202ENST00000377135 TCOF1Q13428 1488 aaKnown RBP27.58■■■□□ 2.01
IRF3-202ENST00000377135 DAPK1P53355 1430 aa27.58■■■□□ 2.01
IRF3-202ENST00000377135 NCKAP5LQ9HCH0 1330 aa27.58■■■□□ 2.01
IRF3-202ENST00000377135 KDM5DQ9BY66 1539 aa27.57■■■□□ 2
IRF3-202ENST00000377135 KIF15Q9NS87 1388 aa27.57■■■□□ 2
IRF3-202ENST00000377135 DUOX2Q9NRD8 1548 aa27.55■■■□□ 2
IRF3-202ENST00000377135 PTPRTO14522 1441 aa27.55■■■□□ 2
IRF3-202ENST00000377135 NCOA1Q15788 1441 aa27.55■■■□□ 2
IRF3-202ENST00000377135 TNRQ92752 1358 aa27.54■■■□□ 2
IRF3-202ENST00000377135 FAM135AQ9P2D6 1515 aa27.54■■■□□ 2
IRF3-202ENST00000377135 SHANK2Q9UPX8 1470 aa27.53■■■□□ 2
IRF3-202ENST00000377135 CAMSAP1Q5T5Y3 1602 aa27.53■■■□□ 2
IRF3-202ENST00000377135 PZPP20742 1482 aa27.53■■■□□ 2
IRF3-202ENST00000377135 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.52■■■□□ 25e-6■■■□□ 18.6
IRF3-202ENST00000377135 ANKRD30AQ9BXX3 1397 aa27.52■■■□□ 2
IRF3-202ENST00000377135 PKD2Q13563 968 aa27.51■■□□□ 1.99
IRF3-202ENST00000377135 PPARGC1BQ86YN6 1023 aaKnown RBP27.5■■□□□ 1.99
IRF3-202ENST00000377135 DNMT1P26358 1616 aaKnown RBP27.49■■□□□ 1.99
IRF3-202ENST00000377135 CEP170BQ9Y4F5 1589 aaPredicted RBP27.48■■□□□ 1.99
IRF3-202ENST00000377135 MYO3AQ8NEV4 1616 aa27.48■■□□□ 1.99
IRF3-202ENST00000377135 A2ML1A8K2U0 1454 aa27.47■■□□□ 1.99
IRF3-202ENST00000377135 RNF17Q9BXT8 1623 aaKnown RBP27.47■■□□□ 1.99
IRF3-202ENST00000377135 EIF2AK4Q9P2K8 1649 aaKnown RBP27.47■■□□□ 1.99
IRF3-202ENST00000377135 THEMISQ8N1K5 641 aaPredicted RBP27.46■■□□□ 1.99
IRF3-202ENST00000377135 ERBINQ96RT1 1412 aa27.46■■□□□ 1.99
IRF3-202ENST00000377135 ABCC3O15438 1527 aa27.45■■□□□ 1.99
IRF3-202ENST00000377135 CROCC2H7BZ55 1655 aa27.44■■□□□ 1.98
IRF3-202ENST00000377135 PLA2R1Q13018 1463 aa27.43■■□□□ 1.98
IRF3-202ENST00000377135 ZNF142P52746 1687 aaPredicted RBP27.42■■□□□ 1.98
IRF3-202ENST00000377135 KANK1Q14678 1352 aa27.4■■□□□ 1.98
IRF3-202ENST00000377135 MROH1Q8NDA8 1641 aa27.39■■□□□ 1.98
IRF3-202ENST00000377135 ANKLE2Q86XL3 938 aa27.39■■□□□ 1.97
IRF3-202ENST00000377135 NLRP1Q9C000 1473 aa27.38■■□□□ 1.97
IRF3-202ENST00000377135 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.36■■□□□ 1.973e-6■□□□□ 11.3
IRF3-202ENST00000377135 ZC3H13Q5T200 1668 aaKnown RBP27.36■■□□□ 1.97
IRF3-202ENST00000377135 CFAP65Q6ZU64 1925 aaKnown RBP27.33■■□□□ 1.97
IRF3-202ENST00000377135 ZNF335Q9H4Z2 1342 aaPredicted RBP27.33■■□□□ 1.97
IRF3-202ENST00000377135 ITGAEP38570 1179 aa27.33■■□□□ 1.96
IRF3-202ENST00000377135 ADGRL2O95490 1459 aa27.32■■□□□ 1.96
IRF3-202ENST00000377135 ERVK-7P63135 1459 aa27.32■■□□□ 1.96
IRF3-202ENST00000377135 ARHGAP31Q2M1Z3 1444 aa27.31■■□□□ 1.96
IRF3-202ENST00000377135 CEP152O94986 1710 aa27.31■■□□□ 1.96
IRF3-202ENST00000377135 UGGT1Q9NYU2 1555 aa27.31■■□□□ 1.96
IRF3-202ENST00000377135 PRDM15P57071 1507 aaPredicted RBP27.3■■□□□ 1.96
IRF3-202ENST00000377135 SPATA31D1Q6ZQQ2 1576 aa27.3■■□□□ 1.96
IRF3-202ENST00000377135 ANKRD50Q9ULJ7 1429 aa27.29■■□□□ 1.96
IRF3-202ENST00000377135 LTBP4Q8N2S1 1624 aa27.28■■□□□ 1.96
IRF3-202ENST00000377135 DEPDC5O75140 1603 aa27.25■■□□□ 1.95
IRF3-202ENST00000377135 STAG3Q9UJ98 1225 aa27.23■■□□□ 1.95
IRF3-202ENST00000377135 ROCK1Q13464 1354 aa27.21■■□□□ 1.95
IRF3-202ENST00000377135 IDI1Q13907 227 aa27.21■■□□□ 1.95
IRF3-202ENST00000377135 LMTK2Q8IWU2 1503 aa27.19■■□□□ 1.94
IRF3-202ENST00000377135 TXNDC2Q86VQ3 553 aa27.19■■□□□ 1.94
IRF3-202ENST00000377135 VWDEQ8N2E2 1590 aa27.18■■□□□ 1.94
IRF3-202ENST00000377135 NPHP4O75161 1426 aaPredicted RBP27.18■■□□□ 1.94
IRF3-202ENST00000377135 LTKP29376 864 aa27.16■■□□□ 1.94
IRF3-202ENST00000377135 EID1Q9Y6B2 187 aa27.16■■□□□ 1.94
IRF3-202ENST00000377135 MED14O60244 1454 aa27.15■■□□□ 1.94
IRF3-202ENST00000377135 NEURL4Q96JN8 1562 aa27.15■■□□□ 1.94
IRF3-202ENST00000377135 POLR1AO95602 1720 aaPredicted RBP27.15■■□□□ 1.94
IRF3-202ENST00000377135 IQSEC2Q5JU85 1478 aa27.14■■□□□ 1.94
IRF3-202ENST00000377135 SLC52A1Q9NWF4 448 aa27.14■■□□□ 1.93
IRF3-202ENST00000377135 UBAP1LF5GYI3 381 aa27.11■■□□□ 1.93
IRF3-202ENST00000377135 UBR1Q8IWV7 1749 aa27.1■■□□□ 1.93
IRF3-202ENST00000377135 NOS1P29475 1434 aa27.1■■□□□ 1.93
IRF3-202ENST00000377135 EFCAB6Q5THR3 1501 aa27.08■■□□□ 1.93
IRF3-202ENST00000377135 NUP155O75694 1391 aa27.07■■□□□ 1.92
IRF3-202ENST00000377135 TMEM2Q9UHN6 1383 aa27.07■■□□□ 1.92
IRF3-202ENST00000377135 SCAF11Q99590 1463 aaKnown RBP27.05■■□□□ 1.92
IRF3-202ENST00000377135 RPRD2Q5VT52 1461 aaKnown RBP27.05■■□□□ 1.92
IRF3-202ENST00000377135 ARHGAP23Q9P227 1491 aa27.05■■□□□ 1.92
IRF3-202ENST00000377135 RRBP1Q9P2E9 1410 aaKnown RBP27.04■■□□□ 1.92
IRF3-202ENST00000377135 PIK3C2BO00750 1634 aa27.04■■□□□ 1.92
IRF3-202ENST00000377135 SLIT1O75093 1534 aa27.03■■□□□ 1.92
IRF3-202ENST00000377135 IQGAP1P46940 1657 aa27.02■■□□□ 1.92
IRF3-202ENST00000377135 SYNMO15061 1565 aa27.02■■□□□ 1.92
IRF3-202ENST00000377135 CPS1P31327 1500 aa27.01■■□□□ 1.91
IRF3-202ENST00000377135 UNC13BO14795 1591 aa27■■□□□ 1.91
IRF3-202ENST00000377135 TET3O43151 1660 aa26.99■■□□□ 1.91
IRF3-202ENST00000377135 TOM1O60784 492 aa26.99■■□□□ 1.91
IRF3-202ENST00000377135 CHGAP10645 457 aaKnown RBP26.98■■□□□ 1.91
IRF3-202ENST00000377135 HDGFP51858 240 aaKnown RBP26.98■■□□□ 1.91
IRF3-202ENST00000377135 BCANQ96GW7 911 aa26.97■■□□□ 1.91
IRF3-202ENST00000377135 PIP4K2BP78356 416 aa26.94■■□□□ 1.9
IRF3-202ENST00000377135 SLC26A8Q96RN1 970 aa26.94■■□□□ 1.9
IRF3-202ENST00000377135 KDM5AP29375 1690 aaKnown RBP26.93■■□□□ 1.9
IRF3-202ENST00000377135 SCAF1Q9H7N4 1312 aaKnown RBP26.92■■□□□ 1.9
IRF3-202ENST00000377135 GCC2Q8IWJ2 1684 aa26.92■■□□□ 1.9
IRF3-202ENST00000377135 IQGAP3Q86VI3 1631 aa26.91■■□□□ 1.9
IRF3-202ENST00000377135 SENP3Q9H4L4 574 aaPredicted RBP26.9■■□□□ 1.9
IRF3-202ENST00000377135 PPP1R15AO75807 674 aaPredicted RBP26.9■■□□□ 1.9
IRF3-202ENST00000377135 ADGRB3O60242 1522 aa26.89■■□□□ 1.9
IRF3-202ENST00000377135 NAIPQ13075 1403 aa26.88■■□□□ 1.89
IRF3-202ENST00000377135 E9PCH4 1651 aa26.88■■□□□ 1.89
IRF3-202ENST00000377135 TRIM52Q96A61 297 aa26.88■■□□□ 1.89
IRF3-202ENST00000377135 LRRC7Q96NW7 1537 aa26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms