RNA–Protein interactions for RNA: ENST00000376806.9

HLA-A-202, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-202ENST00000376806 AFAP1Q8N556 730 aa23.83■■□□□ 1.41
HLA-A-202ENST00000376806 EIF2AK4Q9P2K8 1649 aaKnown RBP23.83■■□□□ 1.4
HLA-A-202ENST00000376806 KIDINS220Q9ULH0 1771 aa23.82■■□□□ 1.4
HLA-A-202ENST00000376806 NBPF8Q3BBV2 869 aa23.81■■□□□ 1.4
HLA-A-202ENST00000376806 POLR1AO95602 1720 aaPredicted RBP23.78■■□□□ 1.4
HLA-A-202ENST00000376806 ZNF518AQ6AHZ1 1483 aa23.78■■□□□ 1.4
HLA-A-202ENST00000376806 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.77■■□□□ 1.4
HLA-A-202ENST00000376806 KDM5CP41229 1560 aa23.77■■□□□ 1.4
HLA-A-202ENST00000376806 HSPA5P11021 654 aaKnown RBP23.77■■□□□ 1.4
HLA-A-202ENST00000376806 DDX10Q13206 875 aaKnown RBP23.77■■□□□ 1.4
HLA-A-202ENST00000376806 E9PCH4 1651 aa23.76■■□□□ 1.39
HLA-A-202ENST00000376806 PLA2R1Q13018 1463 aa23.75■■□□□ 1.39
HLA-A-202ENST00000376806 UHRF1BP1Q6BDS2 1440 aa23.75■■□□□ 1.39
HLA-A-202ENST00000376806 EIF4G2P78344 907 aaKnown RBP eCLIP23.75■■□□□ 1.39
HLA-A-202ENST00000376806 TET3O43151 1660 aa23.74■■□□□ 1.39
HLA-A-202ENST00000376806 NEO1Q92859 1461 aa23.74■■□□□ 1.39
HLA-A-202ENST00000376806 CCDC144AA2RUR9 1427 aa23.74■■□□□ 1.39
HLA-A-202ENST00000376806 CENPBP07199 599 aaPredicted RBP23.74■■□□□ 1.39
HLA-A-202ENST00000376806 POGZQ7Z3K3 1410 aa23.73■■□□□ 1.39
HLA-A-202ENST00000376806 ATP10AO60312 1499 aa23.73■■□□□ 1.39
HLA-A-202ENST00000376806 VWDEQ8N2E2 1590 aa23.73■■□□□ 1.39
HLA-A-202ENST00000376806 HECW2Q9P2P5 1572 aa23.72■■□□□ 1.39
HLA-A-202ENST00000376806 PRDM15P57071 1507 aaPredicted RBP23.72■■□□□ 1.39
HLA-A-202ENST00000376806 MROH1Q8NDA8 1641 aa23.72■■□□□ 1.39
HLA-A-202ENST00000376806 RALGAPBQ86X10 1494 aa23.71■■□□□ 1.39
HLA-A-202ENST00000376806 SPHKAPQ2M3C7 1700 aa23.7■■□□□ 1.39
HLA-A-202ENST00000376806 RAPGEF3O95398 923 aa23.68■■□□□ 1.38
HLA-A-202ENST00000376806 YTHDC1Q96MU7 727 aaKnown RBP23.68■■□□□ 1.38
HLA-A-202ENST00000376806 SPATA31E1Q6ZUB1 1445 aa23.68■■□□□ 1.38
HLA-A-202ENST00000376806 DHX29Q7Z478 1369 aaKnown RBP23.68■■□□□ 1.38
HLA-A-202ENST00000376806 COL17A1Q9UMD9 1497 aaPredicted RBP23.67■■□□□ 1.38
HLA-A-202ENST00000376806 RNF17Q9BXT8 1623 aaKnown RBP23.66■■□□□ 1.38
HLA-A-202ENST00000376806 MLH3Q9UHC1 1453 aa23.65■■□□□ 1.38
HLA-A-202ENST00000376806 TRPM2O94759 1503 aa23.65■■□□□ 1.38
HLA-A-202ENST00000376806 CEP152O94986 1710 aa23.65■■□□□ 1.38
HLA-A-202ENST00000376806 ABCA6Q8N139 1617 aa23.65■■□□□ 1.38
HLA-A-202ENST00000376806 MYT1LQ9UL68 1186 aa23.64■■□□□ 1.38
HLA-A-202ENST00000376806 RICTORQ6R327 1708 aa23.64■■□□□ 1.37
HLA-A-202ENST00000376806 BCORL1Q5H9F3 1711 aa23.63■■□□□ 1.37
HLA-A-202ENST00000376806 TRPM1Q7Z4N2 1603 aa23.63■■□□□ 1.37
HLA-A-202ENST00000376806 ZNF326Q5BKZ1 582 aaKnown RBP23.63■■□□□ 1.37
HLA-A-202ENST00000376806 WASHC2AQ641Q2 1341 aa23.63■■□□□ 1.37
HLA-A-202ENST00000376806 FRMPD1Q5SYB0 1578 aa23.62■■□□□ 1.37
HLA-A-202ENST00000376806 KANK1Q14678 1352 aa23.62■■□□□ 1.37
HLA-A-202ENST00000376806 A2MP01023 1474 aa23.62■■□□□ 1.37
HLA-A-202ENST00000376806 CLTCL1P53675 1640 aa23.58■■□□□ 1.37
HLA-A-202ENST00000376806 USP47Q96K76 1375 aa23.58■■□□□ 1.37
HLA-A-202ENST00000376806 EFCAB6Q5THR3 1501 aa23.58■■□□□ 1.36
HLA-A-202ENST00000376806 KIF3BO15066 747 aa23.58■■□□□ 1.36
HLA-A-202ENST00000376806 DCAF11Q8TEB1 546 aa23.58■■□□□ 1.36
HLA-A-202ENST00000376806 PTPRTO14522 1441 aa23.57■■□□□ 1.36
HLA-A-202ENST00000376806 PRAG1Q86YV5 1406 aa23.57■■□□□ 1.36
HLA-A-202ENST00000376806 CCDC7Q96M83 1385 aa23.57■■□□□ 1.36
HLA-A-202ENST00000376806 LMTK2Q8IWU2 1503 aa23.55■■□□□ 1.36
HLA-A-202ENST00000376806 DIP2CQ9Y2E4 1556 aa23.55■■□□□ 1.36
HLA-A-202ENST00000376806 CNTLNQ9NXG0 1405 aa23.55■■□□□ 1.36
HLA-A-202ENST00000376806 LAMC1P11047 1609 aa23.55■■□□□ 1.36
HLA-A-202ENST00000376806 KDM2AQ9Y2K7 1162 aa23.54■■□□□ 1.36
HLA-A-202ENST00000376806 ANP32CO43423 234 aa23.52■■□□□ 1.36
HLA-A-202ENST00000376806 C11orf95C9JLR9 678 aaPredicted RBP23.51■■□□□ 1.35
HLA-A-202ENST00000376806 RGL3Q3MIN7 710 aa23.49■■□□□ 1.35
HLA-A-202ENST00000376806 NEURL4Q96JN8 1562 aa23.48■■□□□ 1.35
HLA-A-202ENST00000376806 KIF7Q2M1P5 1343 aa23.48■■□□□ 1.35
HLA-A-202ENST00000376806 MADDQ8WXG6 1647 aa23.48■■□□□ 1.35
HLA-A-202ENST00000376806 CARD11Q9BXL7 1154 aa23.47■■□□□ 1.35
HLA-A-202ENST00000376806 KIF1BO60333 1816 aa23.47■■□□□ 1.35
HLA-A-202ENST00000376806 ROCK2O75116 1388 aaKnown RBP23.47■■□□□ 1.35
HLA-A-202ENST00000376806 SCAF1Q9H7N4 1312 aaKnown RBP23.46■■□□□ 1.35
HLA-A-202ENST00000376806 YEATS2Q9ULM3 1422 aa23.46■■□□□ 1.35
HLA-A-202ENST00000376806 CCER2I3L3R5 266 aa23.45■■□□□ 1.35
HLA-A-202ENST00000376806 ZMYM4Q5VZL5 1548 aa23.45■■□□□ 1.34
HLA-A-202ENST00000376806 GPRASP1Q5JY77 1395 aa23.44■■□□□ 1.34
HLA-A-202ENST00000376806 CAMSAP1Q5T5Y3 1602 aa23.43■■□□□ 1.34
HLA-A-202ENST00000376806 ABCC3O15438 1527 aa23.42■■□□□ 1.34
HLA-A-202ENST00000376806 UGGT1Q9NYU2 1555 aa23.41■■□□□ 1.34
HLA-A-202ENST00000376806 MROH2AA6NES4 1674 aa23.41■■□□□ 1.34
HLA-A-202ENST00000376806 IFT172Q9UG01 1749 aa23.41■■□□□ 1.34
HLA-A-202ENST00000376806 ZC3H13Q5T200 1668 aaKnown RBP23.41■■□□□ 1.34
HLA-A-202ENST00000376806 ARID4BQ4LE39 1312 aaPredicted RBP23.38■■□□□ 1.33
HLA-A-202ENST00000376806 CFAP65Q6ZU64 1925 aaKnown RBP23.36■■□□□ 1.33
HLA-A-202ENST00000376806 IQGAP1P46940 1657 aa23.36■■□□□ 1.33
HLA-A-202ENST00000376806 KIAA1210Q9ULL0 1709 aa23.36■■□□□ 1.33
HLA-A-202ENST00000376806 NPATQ14207 1427 aa23.35■■□□□ 1.33
HLA-A-202ENST00000376806 SIGLEC1Q9BZZ2 1709 aa23.34■■□□□ 1.33
HLA-A-202ENST00000376806 ADGRB3O60242 1522 aa23.33■■□□□ 1.33
HLA-A-202ENST00000376806 NBPF1Q3BBV0 1214 aa23.33■■□□□ 1.33
HLA-A-202ENST00000376806 ST20-MTHFSA0A0A6YYL1 179 aa23.32■■□□□ 1.32
HLA-A-202ENST00000376806 GGT6Q6P531 493 aa23.32■■□□□ 1.32
HLA-A-202ENST00000376806 MYOM2P54296 1465 aa23.31■■□□□ 1.32
HLA-A-202ENST00000376806 ARHGEF40Q8TER5 1519 aa23.31■■□□□ 1.32
HLA-A-202ENST00000376806 STAC3Q96MF2 364 aa23.3■■□□□ 1.32
HLA-A-202ENST00000376806 REREQ9P2R6 1566 aa23.29■■□□□ 1.32
HLA-A-202ENST00000376806 GTF3C3Q9Y5Q9 886 aa23.28■■□□□ 1.32
HLA-A-202ENST00000376806 PPLO60437 1756 aa23.27■■□□□ 1.32
HLA-A-202ENST00000376806 PIK3C2BO00750 1634 aa23.27■■□□□ 1.32
HLA-A-202ENST00000376806 WASHC2CQ9Y4E1 1318 aa23.26■■□□□ 1.31
HLA-A-202ENST00000376806 SYNMO15061 1565 aa23.25■■□□□ 1.31
HLA-A-202ENST00000376806 POLR3GLQ9BT43 218 aa23.24■■□□□ 1.31
HLA-A-202ENST00000376806 NOS1P29475 1434 aa23.24■■□□□ 1.31
HLA-A-202ENST00000376806 ARHGAP31Q2M1Z3 1444 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms