RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 IQGAP2Q13576 1575 aa15.3■□□□□ 0.04
TM9SF2-201ENST00000376387 CARD11Q9BXL7 1154 aa15.29■□□□□ 0.04
TM9SF2-201ENST00000376387 ST20-MTHFSA0A0A6YYL1 179 aa15.29■□□□□ 0.04
TM9SF2-201ENST00000376387 KIAA1107Q9UPP5 1409 aa15.28■□□□□ 0.04
TM9SF2-201ENST00000376387 KIF15Q9NS87 1388 aa15.28■□□□□ 0.04
TM9SF2-201ENST00000376387 KDM2AQ9Y2K7 1162 aa15.28■□□□□ 0.04
TM9SF2-201ENST00000376387 MYBBP1AQ9BQG0 1328 aaKnown RBP15.27■□□□□ 0.04
TM9SF2-201ENST00000376387 ZNF777Q9ULD5 760 aaPredicted RBP15.26■□□□□ 0.03
TM9SF2-201ENST00000376387 ARID4BQ4LE39 1312 aaPredicted RBP15.26■□□□□ 0.03
TM9SF2-201ENST00000376387 BRD4O60885 1362 aaPredicted RBP15.25■□□□□ 0.03
TM9SF2-201ENST00000376387 MAGI1Q96QZ7 1491 aaPredicted RBP15.25■□□□□ 0.03
TM9SF2-201ENST00000376387 SLC4A3P48751 1232 aa15.24■□□□□ 0.03
TM9SF2-201ENST00000376387 TPRNQ4KMQ1 711 aa15.24■□□□□ 0.03
TM9SF2-201ENST00000376387 ROCK2O75116 1388 aaKnown RBP15.24■□□□□ 0.03
TM9SF2-201ENST00000376387 TAOK2Q9UL54 1235 aa15.23■□□□□ 0.03
TM9SF2-201ENST00000376387 CAMSAP2Q08AD1 1489 aa15.23■□□□□ 0.03
TM9SF2-201ENST00000376387 NUP153P49790 1475 aaKnown RBP15.23■□□□□ 0.03
TM9SF2-201ENST00000376387 RALGAPBQ86X10 1494 aa15.23■□□□□ 0.03
TM9SF2-201ENST00000376387 PRG4Q92954 1404 aaPredicted RBP15.22■□□□□ 0.03
TM9SF2-201ENST00000376387 RALBP1Q15311 655 aa15.21■□□□□ 0.03
TM9SF2-201ENST00000376387 CRBNQ96SW2 442 aa15.21■□□□□ 0.03
TM9SF2-201ENST00000376387 WASHC2CQ9Y4E1 1318 aa15.21■□□□□ 0.03
TM9SF2-201ENST00000376387 MS4A1P11836 297 aa15.21■□□□□ 0.03
TM9SF2-201ENST00000376387 CFDP1Q9UEE9 299 aaPredicted RBP15.21■□□□□ 0.03
TM9SF2-201ENST00000376387 BRPF3Q9ULD4 1205 aa15.21■□□□□ 0.03
TM9SF2-201ENST00000376387 TAF7LQ5H9L4 462 aa15.21■□□□□ 0.02
TM9SF2-201ENST00000376387 UHRF1BP1Q6BDS2 1440 aa15.21■□□□□ 0.02
TM9SF2-201ENST00000376387 USP35Q9P2H5 1018 aa15.2■□□□□ 0.02
TM9SF2-201ENST00000376387 E9PCH4 1651 aa15.2■□□□□ 0.02
TM9SF2-201ENST00000376387 KCNA4P22459 653 aa15.2■□□□□ 0.02
TM9SF2-201ENST00000376387 GRIN2AQ12879 1464 aa15.19■□□□□ 0.02
TM9SF2-201ENST00000376387 DCAF11Q8TEB1 546 aa15.19■□□□□ 0.02
TM9SF2-201ENST00000376387 C20orf194Q5TEA3 1177 aa15.19■□□□□ 0.02
TM9SF2-201ENST00000376387 ADGBQ8N7X0 1667 aa15.19■□□□□ 0.02
TM9SF2-201ENST00000376387 KIAA0586Q9BVV6 1533 aa15.19■□□□□ 0.02
TM9SF2-201ENST00000376387 PPM1GO15355 546 aaPredicted RBP15.18■□□□□ 0.02
TM9SF2-201ENST00000376387 SYNJ2O15056 1496 aa15.18■□□□□ 0.02
TM9SF2-201ENST00000376387 SAMD1Q6SPF0 538 aaPredicted RBP15.17■□□□□ 0.02
TM9SF2-201ENST00000376387 NLRP13Q86W25 1043 aa15.17■□□□□ 0.02
TM9SF2-201ENST00000376387 DISP1Q96F81 1524 aa15.16■□□□□ 0.02
TM9SF2-201ENST00000376387 RBM10P98175 930 aaKnown RBP15.16■□□□□ 0.02
TM9SF2-201ENST00000376387 NUP155O75694 1391 aa15.16■□□□□ 0.02
TM9SF2-201ENST00000376387 PARD3Q8TEW0 1356 aa15.16■□□□□ 0.02
TM9SF2-201ENST00000376387 CC2D1BQ5T0F9 858 aaKnown RBP15.15■□□□□ 0.02
TM9SF2-201ENST00000376387 ANKRD50Q9ULJ7 1429 aa15.15■□□□□ 0.02
TM9SF2-201ENST00000376387 GPATCH8Q9UKJ3 1502 aaKnown RBP15.15■□□□□ 0.02
TM9SF2-201ENST00000376387 RAPGEF6Q8TEU7 1601 aa15.15■□□□□ 0.02
TM9SF2-201ENST00000376387 NFKBIBQ15653 356 aa15.15■□□□□ 0.02
TM9SF2-201ENST00000376387 PDE3BQ13370 1112 aa15.14■□□□□ 0.01
TM9SF2-201ENST00000376387 KIAA0556O60303 1618 aa15.14■□□□□ 0.01
TM9SF2-201ENST00000376387 KTN1Q86UP2 1357 aaKnown RBP15.14■□□□□ 0.01
TM9SF2-201ENST00000376387 CROCC2H7BZ55 1655 aa15.14■□□□□ 0.01
TM9SF2-201ENST00000376387 AAMPQ13685 434 aa15.14■□□□□ 0.01
TM9SF2-201ENST00000376387 PER1O15534 1290 aaPredicted RBP15.13■□□□□ 0.01
TM9SF2-201ENST00000376387 ADGRL2O95490 1459 aa15.13■□□□□ 0.01
TM9SF2-201ENST00000376387 GSE1Q14687 1217 aa15.13■□□□□ 0.01
TM9SF2-201ENST00000376387 ANKRD30AQ9BXX3 1397 aa15.12■□□□□ 0.01
TM9SF2-201ENST00000376387 NBPF1Q3BBV0 1214 aa15.12■□□□□ 0.01
TM9SF2-201ENST00000376387 FRAT1Q92837 279 aaPredicted RBP15.12■□□□□ 0.01
TM9SF2-201ENST00000376387 TROQ12816 1431 aaPredicted RBP15.11■□□□□ 0.01
TM9SF2-201ENST00000376387 ZMYND15Q9H091 742 aa15.11■□□□□ 0.01
TM9SF2-201ENST00000376387 ARHGEF12Q9NZN5 1544 aa15.1■□□□□ 0.01
TM9SF2-201ENST00000376387 CEP170Q5SW79 1584 aa15.1■□□□□ 0.01
TM9SF2-201ENST00000376387 DDRGK1Q96HY6 314 aa15.1■□□□□ 0.01
TM9SF2-201ENST00000376387 NUP160Q12769 1436 aa15.09■□□□□ 0.01
TM9SF2-201ENST00000376387 ITSN2Q9NZM3 1697 aa15.09■□□□□ 0.01
TM9SF2-201ENST00000376387 KDM2BQ8NHM5 1336 aa15.08■□□□□ 0.01
TM9SF2-201ENST00000376387 PLB1Q6P1J6 1458 aa15.08■□□□□ 0
TM9SF2-201ENST00000376387 VSIG10Q8N0Z9 540 aa15.08■□□□□ 0
TM9SF2-201ENST00000376387 AMER1Q5JTC6 1135 aaPredicted RBP15.08■□□□□ 0
TM9SF2-201ENST00000376387 CHMP7Q8WUX9 453 aaPredicted RBP15.08■□□□□ 0
TM9SF2-201ENST00000376387 RGL3Q3MIN7 710 aa15.07■□□□□ 0
TM9SF2-201ENST00000376387 BLMP54132 1417 aaPredicted RBP15.07■□□□□ 0
TM9SF2-201ENST00000376387 DISP3Q9P2K9 1392 aa15.07■□□□□ 0
TM9SF2-201ENST00000376387 C8orf34Q49A92 452 aa15.06■□□□□ 0
TM9SF2-201ENST00000376387 PANK3Q9H999 370 aa15.06■□□□□ 0
TM9SF2-201ENST00000376387 CFAP44Q96MT7 982 aa15.05■□□□□ 0
TM9SF2-201ENST00000376387 KDM5DQ9BY66 1539 aa15.05■□□□□ -0
TM9SF2-201ENST00000376387 ADAMTS8Q9UP79 889 aa15.05■□□□□ -0
TM9SF2-201ENST00000376387 CDC42BPAQ5VT25 1732 aa15.05■□□□□ -0
TM9SF2-201ENST00000376387 C9orf84Q5VXU9 1444 aa15.05■□□□□ -0
TM9SF2-201ENST00000376387 FRAT2O75474 233 aaPredicted RBP15.04■□□□□ -0
TM9SF2-201ENST00000376387 TRPM1Q7Z4N2 1603 aa15.04■□□□□ -0
TM9SF2-201ENST00000376387 PRAG1Q86YV5 1406 aa15.03■□□□□ -0
TM9SF2-201ENST00000376387 ZMYM4Q5VZL5 1548 aa15.03■□□□□ -0
TM9SF2-201ENST00000376387 RGS3P49796 1198 aa15.02■□□□□ -0
TM9SF2-201ENST00000376387 TESK2Q96S53 571 aa15.02■□□□□ -0
TM9SF2-201ENST00000376387 PLEKHH1Q9ULM0 1364 aa15.02□□□□□ -0.01
TM9SF2-201ENST00000376387 HNRNPMP52272 730 aaKnown RBP eCLIP15.02□□□□□ -0.015e-6■■■■□ 26.4
TM9SF2-201ENST00000376387 FAM161AQ3B820 660 aa15.01□□□□□ -0.01
TM9SF2-201ENST00000376387 ADCY10Q96PN6 1610 aa15.01□□□□□ -0.01
TM9SF2-201ENST00000376387 CENPQQ7L2Z9 268 aaPredicted RBP15□□□□□ -0.01
TM9SF2-201ENST00000376387 BRD2P25440 801 aaKnown RBP15□□□□□ -0.01
TM9SF2-201ENST00000376387 DUSP27Q5VZP5 1158 aa15□□□□□ -0.01
TM9SF2-201ENST00000376387 COL17A1Q9UMD9 1497 aaPredicted RBP15□□□□□ -0.01
TM9SF2-201ENST00000376387 PTPRGP23470 1445 aa14.98□□□□□ -0.01
TM9SF2-201ENST00000376387 FBLN2P98095 1184 aa14.98□□□□□ -0.01
TM9SF2-201ENST00000376387 CHD1O14646 1710 aa14.97□□□□□ -0.01
TM9SF2-201ENST00000376387 TSPY4P0CV99 314 aa14.97□□□□□ -0.01
TM9SF2-201ENST00000376387 TSPY10P0CW01 314 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms