RNA–Protein interactions for RNA: ENST00000375437.6

SCN2A-203, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-203ENST00000375437 RAD21O60216 631 aa6.71□□□□□ -1.34
SCN2A-203ENST00000375437 PCMTD1Q96MG8 357 aaPredicted RBP6.71□□□□□ -1.34
SCN2A-203ENST00000375437 SUPT16HQ9Y5B9 1047 aaKnown RBP6.71□□□□□ -1.34
SCN2A-203ENST00000375437 EPS15P42566 896 aa6.71□□□□□ -1.34
SCN2A-203ENST00000375437 CC2D1BQ5T0F9 858 aaKnown RBP6.71□□□□□ -1.34
SCN2A-203ENST00000375437 CCDC173Q0VFZ6 552 aa6.7□□□□□ -1.34
SCN2A-203ENST00000375437 EIF4G1Q04637 1599 aaKnown RBP6.7□□□□□ -1.34
SCN2A-203ENST00000375437 FAM184AQ8NB25 1140 aa6.69□□□□□ -1.34
SCN2A-203ENST00000375437 AK7Q96M32 723 aa6.69□□□□□ -1.34
SCN2A-203ENST00000375437 NOP58Q9Y2X3 529 aaKnown RBP6.69□□□□□ -1.34
SCN2A-203ENST00000375437 ATP6V1DQ9Y5K8 247 aa6.69□□□□□ -1.34
SCN2A-203ENST00000375437 PATL2C9JE40 543 aaKnown RBP6.69□□□□□ -1.34
SCN2A-203ENST00000375437 TCERG1O14776 1098 aaKnown RBP6.69□□□□□ -1.34
SCN2A-203ENST00000375437 ST18O60284 1047 aa6.69□□□□□ -1.34
SCN2A-203ENST00000375437 TRIM21P19474 475 aaKnown RBP6.69□□□□□ -1.34
SCN2A-203ENST00000375437 RUFY1Q96T51 708 aa6.69□□□□□ -1.34
SCN2A-203ENST00000375437 C1orf141Q5JVX7 400 aa6.69□□□□□ -1.34
SCN2A-203ENST00000375437 RWDD1Q9H446 243 aaPredicted RBP6.69□□□□□ -1.34
SCN2A-203ENST00000375437 ERICH2A1L162 156 aa6.68□□□□□ -1.34
SCN2A-203ENST00000375437 PMFBP1Q8TBY8 1022 aa6.68□□□□□ -1.34
SCN2A-203ENST00000375437 GOLGA3Q08378 1498 aa6.68□□□□□ -1.34
SCN2A-203ENST00000375437 APBB1O00213 710 aa6.68□□□□□ -1.34
SCN2A-203ENST00000375437 FBXW7Q969H0 707 aa6.68□□□□□ -1.34
SCN2A-203ENST00000375437 TMEM132AQ24JP5 1023 aa6.68□□□□□ -1.34
SCN2A-203ENST00000375437 DCTN1Q14203 1278 aa6.68□□□□□ -1.34
SCN2A-203ENST00000375437 HSP90AB2PQ58FF8 381 aa6.68□□□□□ -1.34
SCN2A-203ENST00000375437 SF3B2Q13435 895 aaKnown RBP6.67□□□□□ -1.34
SCN2A-203ENST00000375437 KLHL34Q8N239 644 aa6.67□□□□□ -1.34
SCN2A-203ENST00000375437 CCNB3Q8WWL7 1395 aa6.67□□□□□ -1.34
SCN2A-203ENST00000375437 AMPHP49418 695 aa6.67□□□□□ -1.34
SCN2A-203ENST00000375437 ANKRD18AQ8IVF6 992 aa6.67□□□□□ -1.34
SCN2A-203ENST00000375437 RBM33Q96EV2 1170 aaKnown RBP6.67□□□□□ -1.34
SCN2A-203ENST00000375437 TERF2IPQ9NYB0 399 aa6.67□□□□□ -1.34
SCN2A-203ENST00000375437 DHX16O60231 1041 aaKnown RBP6.67□□□□□ -1.34
SCN2A-203ENST00000375437 NGDNQ8NEJ9 315 aaKnown RBP6.67□□□□□ -1.34
SCN2A-203ENST00000375437 DNAI2Q9GZS0 605 aa6.67□□□□□ -1.34
SCN2A-203ENST00000375437 TEX35Q5T0J7 233 aa6.67□□□□□ -1.34
SCN2A-203ENST00000375437 ITPRIPQ8IWB1 547 aa6.67□□□□□ -1.34
SCN2A-203ENST00000375437 BAZ1AQ9NRL2 1556 aaPredicted RBP6.67□□□□□ -1.34
SCN2A-203ENST00000375437 HMGB2P26583 209 aaKnown RBP6.67□□□□□ -1.34
SCN2A-203ENST00000375437 STK26Q9P289 416 aa6.66□□□□□ -1.34
SCN2A-203ENST00000375437 CEP164Q9UPV0 1460 aa6.66□□□□□ -1.34
SCN2A-203ENST00000375437 ZFYVE27Q5T4F4 411 aa6.66□□□□□ -1.34
SCN2A-203ENST00000375437 DESP17661 470 aa6.66□□□□□ -1.34
SCN2A-203ENST00000375437 NEXNQ0ZGT2 675 aa6.66□□□□□ -1.34
SCN2A-203ENST00000375437 CEP162Q5TB80 1403 aa6.66□□□□□ -1.34
SCN2A-203ENST00000375437 KTN1Q86UP2 1357 aaKnown RBP6.66□□□□□ -1.34
SCN2A-203ENST00000375437 CCAR2Q8N163 923 aaKnown RBP6.66□□□□□ -1.34
SCN2A-203ENST00000375437 FHAD1B1AJZ9 1412 aa6.66□□□□□ -1.34
SCN2A-203ENST00000375437 TRDNQ13061 729 aa6.66□□□□□ -1.34
SCN2A-203ENST00000375437 ACBD3Q9H3P7 528 aa6.65□□□□□ -1.34
SCN2A-203ENST00000375437 CCDC191Q8NCU4 936 aa6.65□□□□□ -1.34
SCN2A-203ENST00000375437 SPRYD3Q8NCJ5 442 aa6.65□□□□□ -1.34
SCN2A-203ENST00000375437 BRMS1Q9HCU9 246 aa6.65□□□□□ -1.34
SCN2A-203ENST00000375437 BECN2A8MW95 431 aa6.65□□□□□ -1.35
SCN2A-203ENST00000375437 NOM1Q5C9Z4 860 aaKnown RBP6.65□□□□□ -1.35
SCN2A-203ENST00000375437 TTC5Q8N0Z6 440 aa6.64□□□□□ -1.35
SCN2A-203ENST00000375437 SEPT11Q9NVA2 429 aaKnown RBP6.64□□□□□ -1.35
SCN2A-203ENST00000375437 SAFB2Q14151 953 aaKnown RBP eCLIP6.64□□□□□ -1.35
SCN2A-203ENST00000375437 CCDC97Q96F63 343 aaPredicted RBP6.64□□□□□ -1.35
SCN2A-203ENST00000375437 MAP7D2Q96T17 732 aa6.64□□□□□ -1.35
SCN2A-203ENST00000375437 KIF27Q86VH2 1401 aa6.64□□□□□ -1.35
SCN2A-203ENST00000375437 NAP1L1P55209 391 aaKnown RBP6.64□□□□□ -1.35
SCN2A-203ENST00000375437 RUFY2Q8WXA3 655 aa6.64□□□□□ -1.35
SCN2A-203ENST00000375437 CARMIL2Q6F5E8 1435 aa6.64□□□□□ -1.35
SCN2A-203ENST00000375437 SYCP1Q15431 976 aa6.63□□□□□ -1.35
SCN2A-203ENST00000375437 DCAF11Q8TEB1 546 aa6.63□□□□□ -1.35
SCN2A-203ENST00000375437 PRDM2Q13029 1718 aa6.63□□□□□ -1.35
SCN2A-203ENST00000375437 XBP1P17861 261 aa6.63□□□□□ -1.35
SCN2A-203ENST00000375437 WDHD1O75717 1129 aaPredicted RBP6.63□□□□□ -1.35
SCN2A-203ENST00000375437 SLC4A10Q6U841 1118 aa6.63□□□□□ -1.35
SCN2A-203ENST00000375437 APPP05067 770 aa6.63□□□□□ -1.35
SCN2A-203ENST00000375437 SAFBQ15424 915 aaKnown RBP eCLIP6.63□□□□□ -1.35
SCN2A-203ENST00000375437 BAZ1BQ9UIG0 1483 aaKnown RBP6.63□□□□□ -1.35
SCN2A-203ENST00000375437 U2AF1L5P0DN76 240 aaPredicted RBP6.62□□□□□ -1.35
SCN2A-203ENST00000375437 PPM1FP49593 454 aaPredicted RBP6.62□□□□□ -1.35
SCN2A-203ENST00000375437 U2AF1Q01081 240 aaKnown RBP eCLIP6.62□□□□□ -1.35
SCN2A-203ENST00000375437 HOMER1Q86YM7 354 aa6.62□□□□□ -1.35
SCN2A-203ENST00000375437 CHMP5Q9NZZ3 219 aa6.62□□□□□ -1.35
SCN2A-203ENST00000375437 GOLGA6L3A6NEY3 463 aa6.62□□□□□ -1.35
SCN2A-203ENST00000375437 HIRIP3Q9BW71 556 aaPredicted RBP6.62□□□□□ -1.35
SCN2A-203ENST00000375437 VSIG10Q8N0Z9 540 aa6.62□□□□□ -1.35
SCN2A-203ENST00000375437 OFD1O75665 1012 aa6.62□□□□□ -1.35
SCN2A-203ENST00000375437 DDX58O95786 925 aaKnown RBP6.61□□□□□ -1.35
SCN2A-203ENST00000375437 IKQ13123 557 aaPredicted RBP6.61□□□□□ -1.35
SCN2A-203ENST00000375437 SEPT7Q16181 437 aaKnown RBP6.61□□□□□ -1.35
SCN2A-203ENST00000375437 MCTP1Q6DN14 999 aa6.61□□□□□ -1.35
SCN2A-203ENST00000375437 GGT6Q6P531 493 aa6.61□□□□□ -1.35
SCN2A-203ENST00000375437 ROCK2O75116 1388 aaKnown RBP6.61□□□□□ -1.35
SCN2A-203ENST00000375437 SLC3A2P08195 630 aaKnown RBP6.61□□□□□ -1.35
SCN2A-203ENST00000375437 CAGE1Q8TC20 777 aa6.61□□□□□ -1.35
SCN2A-203ENST00000375437 CPLX1O14810 134 aa6.61□□□□□ -1.35
SCN2A-203ENST00000375437 NFXL1Q6ZNB6 911 aa6.61□□□□□ -1.35
SCN2A-203ENST00000375437 HSP90AB4PQ58FF6 505 aa6.61□□□□□ -1.35
SCN2A-203ENST00000375437 ERLIN2O94905 339 aa6.61□□□□□ -1.35
SCN2A-203ENST00000375437 UACAQ9BZF9 1416 aa6.61□□□□□ -1.35
SCN2A-203ENST00000375437 RNF20Q5VTR2 975 aa6.61□□□□□ -1.35
SCN2A-203ENST00000375437 B4GALNT3Q6L9W6 998 aa6.61□□□□□ -1.35
SCN2A-203ENST00000375437 ROCK1Q13464 1354 aa6.61□□□□□ -1.35
SCN2A-203ENST00000375437 DDX11L8A8MPP1 907 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms