RNA–Protein interactions for RNA: ENST00000374884.2

SPIN4-201, Transcript of spindlin family member 4, humanhuman

APPRIS P1 BASIC

Gene SPIN4, Length 4,117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN4-201ENST00000374884 FYCO1Q9BQS8 1478 aa12.09□□□□□ -0.47
SPIN4-201ENST00000374884 CLUAP1Q96AJ1 413 aa12.09□□□□□ -0.47
SPIN4-201ENST00000374884 DDX11L8A8MPP1 907 aa12.08□□□□□ -0.48
SPIN4-201ENST00000374884 MORC1Q86VD1 984 aa12.08□□□□□ -0.48
SPIN4-201ENST00000374884 NAIPQ13075 1403 aa12.07□□□□□ -0.48
SPIN4-201ENST00000374884 E9PSI1 815 aa12.07□□□□□ -0.48
SPIN4-201ENST00000374884 COG6Q9Y2V7 657 aa12.06□□□□□ -0.48
SPIN4-201ENST00000374884 U2SURPO15042 1029 aaKnown RBP12.06□□□□□ -0.48
SPIN4-201ENST00000374884 MAP3K1Q13233 1512 aa12.06□□□□□ -0.48
SPIN4-201ENST00000374884 APAF1O14727 1248 aa12.05□□□□□ -0.48
SPIN4-201ENST00000374884 CHMP5Q9NZZ3 219 aa12.05□□□□□ -0.48
SPIN4-201ENST00000374884 IPO8O15397 1037 aaKnown RBP12.04□□□□□ -0.48
SPIN4-201ENST00000374884 ITPRIPQ8IWB1 547 aa12.04□□□□□ -0.48
SPIN4-201ENST00000374884 TOPBP1Q92547 1522 aa12.03□□□□□ -0.48
SPIN4-201ENST00000374884 MIA2Q96PC5 1412 aa12.03□□□□□ -0.48
SPIN4-201ENST00000374884 PLCB2Q00722 1185 aa12.02□□□□□ -0.48
SPIN4-201ENST00000374884 CFAP44Q96MT7 982 aa12.02□□□□□ -0.48
SPIN4-201ENST00000374884 CALD1Q05682 793 aaKnown RBP12.02□□□□□ -0.49
SPIN4-201ENST00000374884 ADAMTS8Q9UP79 889 aa12.02□□□□□ -0.49
SPIN4-201ENST00000374884 NCOA1Q15788 1441 aa12.02□□□□□ -0.49
SPIN4-201ENST00000374884 ZNF644Q9H582 1327 aaPredicted RBP12.02□□□□□ -0.49
SPIN4-201ENST00000374884 POLA1P09884 1462 aaPredicted RBP12.02□□□□□ -0.49
SPIN4-201ENST00000374884 SKOR2Q2VWA4 1001 aaPredicted RBP12.01□□□□□ -0.49
SPIN4-201ENST00000374884 U2AF1L5P0DN76 240 aaPredicted RBP12.01□□□□□ -0.49
SPIN4-201ENST00000374884 U2AF1Q01081 240 aaKnown RBP eCLIP12.01□□□□□ -0.49
SPIN4-201ENST00000374884 NGEFQ8N5V2 710 aa12.01□□□□□ -0.49
SPIN4-201ENST00000374884 CCDC144AA2RUR9 1427 aa12.01□□□□□ -0.49
SPIN4-201ENST00000374884 MRE11P49959 708 aa12.01□□□□□ -0.49
SPIN4-201ENST00000374884 SMC4Q9NTJ3 1288 aa12.01□□□□□ -0.49
SPIN4-201ENST00000374884 GAPVD1Q14C86 1478 aa12□□□□□ -0.49
SPIN4-201ENST00000374884 BCL2L13Q9BXK5 485 aa12□□□□□ -0.49
SPIN4-201ENST00000374884 WASHC2CQ9Y4E1 1318 aa12□□□□□ -0.49
SPIN4-201ENST00000374884 TPRNQ4KMQ1 711 aa11.99□□□□□ -0.49
SPIN4-201ENST00000374884 HNRNPMP52272 730 aaKnown RBP eCLIP11.99□□□□□ -0.49
SPIN4-201ENST00000374884 ARID3AQ99856 593 aa11.99□□□□□ -0.49
SPIN4-201ENST00000374884 STAG3Q9UJ98 1225 aa11.99□□□□□ -0.49
SPIN4-201ENST00000374884 EIF3AQ14152 1382 aaKnown RBP11.99□□□□□ -0.49
SPIN4-201ENST00000374884 FOXD4L1Q9NU39 408 aa11.99□□□□□ -0.49
SPIN4-201ENST00000374884 DDX49Q9Y6V7 483 aaKnown RBP11.98□□□□□ -0.49
SPIN4-201ENST00000374884 CHAF1AQ13111 956 aaPredicted RBP11.97□□□□□ -0.49
SPIN4-201ENST00000374884 TRAK2O60296 914 aa11.97□□□□□ -0.49
SPIN4-201ENST00000374884 PKNOX2Q96KN3 472 aa11.97□□□□□ -0.49
SPIN4-201ENST00000374884 EFCAB5A4FU69 1503 aa11.97□□□□□ -0.49
SPIN4-201ENST00000374884 KIAA2012Q0VF49 1180 aa11.96□□□□□ -0.49
SPIN4-201ENST00000374884 RSPH4AQ5TD94 716 aa11.96□□□□□ -0.49
SPIN4-201ENST00000374884 RRP7AQ9Y3A4 280 aaKnown RBP11.96□□□□□ -0.49
SPIN4-201ENST00000374884 SKAP1Q86WV1 359 aa11.96□□□□□ -0.49
SPIN4-201ENST00000374884 UBE2Q2Q8WVN8 375 aa11.96□□□□□ -0.5
SPIN4-201ENST00000374884 C22orf23Q9BZE7 217 aa11.96□□□□□ -0.5
SPIN4-201ENST00000374884 JPH4Q96JJ6 628 aa11.96□□□□□ -0.5
SPIN4-201ENST00000374884 AAMPQ13685 434 aa11.95□□□□□ -0.5
SPIN4-201ENST00000374884 ZKSCAN2Q63HK3 967 aa11.95□□□□□ -0.5
SPIN4-201ENST00000374884 PANK1Q8TE04 598 aa11.95□□□□□ -0.5
SPIN4-201ENST00000374884 URB2Q14146 1524 aaKnown RBP11.94□□□□□ -0.5
SPIN4-201ENST00000374884 SENP3Q9H4L4 574 aaPredicted RBP11.94□□□□□ -0.5
SPIN4-201ENST00000374884 POGKQ9P215 609 aa11.94□□□□□ -0.5
SPIN4-201ENST00000374884 ANKRD30BQ9BXX2 1392 aa11.93□□□□□ -0.5
SPIN4-201ENST00000374884 PDE3AQ14432 1141 aa11.93□□□□□ -0.5
SPIN4-201ENST00000374884 ZBTB7CA1YPR0 619 aa11.93□□□□□ -0.5
SPIN4-201ENST00000374884 ANKRD50Q9ULJ7 1429 aa11.93□□□□□ -0.5
SPIN4-201ENST00000374884 CARMIL2Q6F5E8 1435 aa11.93□□□□□ -0.5
SPIN4-201ENST00000374884 SYAP1Q96A49 352 aaPredicted RBP11.92□□□□□ -0.5
SPIN4-201ENST00000374884 NPM1P06748 294 aaKnown RBP eCLIP11.92□□□□□ -0.5
SPIN4-201ENST00000374884 KIAA1107Q9UPP5 1409 aa11.92□□□□□ -0.5
SPIN4-201ENST00000374884 MRC2Q9UBG0 1479 aa11.92□□□□□ -0.5
SPIN4-201ENST00000374884 PCF11O94913 1555 aaKnown RBP11.92□□□□□ -0.5
SPIN4-201ENST00000374884 EHBP1L1Q8N3D4 1523 aa11.91□□□□□ -0.5
SPIN4-201ENST00000374884 MCCP23508 829 aa11.91□□□□□ -0.5
SPIN4-201ENST00000374884 FAM13BQ9NYF5 915 aa11.91□□□□□ -0.5
SPIN4-201ENST00000374884 C20orf194Q5TEA3 1177 aa11.91□□□□□ -0.5
SPIN4-201ENST00000374884 BCAR3O75815 825 aa11.91□□□□□ -0.5
SPIN4-201ENST00000374884 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.91□□□□□ -0.5
SPIN4-201ENST00000374884 PPP2R1AP30153 589 aa11.9□□□□□ -0.5
SPIN4-201ENST00000374884 LAMC3Q9Y6N6 1575 aa11.9□□□□□ -0.5
SPIN4-201ENST00000374884 RRP9O43818 475 aaKnown RBP11.9□□□□□ -0.5
SPIN4-201ENST00000374884 MCM4P33991 863 aa11.9□□□□□ -0.5
SPIN4-201ENST00000374884 DZIP1LQ8IYY4 767 aaKnown RBP11.9□□□□□ -0.5
SPIN4-201ENST00000374884 ISY1Q9ULR0 285 aaKnown RBP11.9□□□□□ -0.5
SPIN4-201ENST00000374884 KANK1Q14678 1352 aa11.9□□□□□ -0.5
SPIN4-201ENST00000374884 CDK11BP21127 795 aaKnown RBP11.9□□□□□ -0.5
SPIN4-201ENST00000374884 DDX19BQ9UMR2 479 aa11.89□□□□□ -0.51
SPIN4-201ENST00000374884 APBB1O00213 710 aa11.89□□□□□ -0.51
SPIN4-201ENST00000374884 DNMBPQ6XZF7 1577 aa11.89□□□□□ -0.51
SPIN4-201ENST00000374884 ESPNB1AK53 854 aa11.88□□□□□ -0.51
SPIN4-201ENST00000374884 ST18O60284 1047 aa11.88□□□□□ -0.51
SPIN4-201ENST00000374884 NBPF1Q3BBV0 1214 aa11.88□□□□□ -0.51
SPIN4-201ENST00000374884 ANKRD45Q5TZF3 282 aa11.88□□□□□ -0.51
SPIN4-201ENST00000374884 TPM2P07951 284 aa11.88□□□□□ -0.51
SPIN4-201ENST00000374884 PDZRN3Q9UPQ7 1066 aa11.88□□□□□ -0.51
SPIN4-201ENST00000374884 PTPN23Q9H3S7 1636 aa11.88□□□□□ -0.51
SPIN4-201ENST00000374884 HAP1P54257 671 aaPredicted RBP11.88□□□□□ -0.51
SPIN4-201ENST00000374884 SRPK2P78362 688 aaKnown RBP11.88□□□□□ -0.51
SPIN4-201ENST00000374884 NASPP49321 788 aaPredicted RBP11.87□□□□□ -0.51
SPIN4-201ENST00000374884 ZNF608Q9ULD9 1512 aaPredicted RBP11.87□□□□□ -0.51
SPIN4-201ENST00000374884 RPRD2Q5VT52 1461 aaKnown RBP11.87□□□□□ -0.51
SPIN4-201ENST00000374884 GRPEL1Q9HAV7 217 aa11.87□□□□□ -0.51
SPIN4-201ENST00000374884 RUNDC1Q96C34 613 aa11.86□□□□□ -0.51
SPIN4-201ENST00000374884 SUPT6HQ7KZ85 1726 aaKnown RBP11.86□□□□□ -0.51
SPIN4-201ENST00000374884 MAP7D2Q96T17 732 aa11.86□□□□□ -0.51
SPIN4-201ENST00000374884 ROCK1Q13464 1354 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms