RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 EFCAB2Q5VUJ9 269 aa19.4■□□□□ 0.7
HMGCL-203ENST00000374490 KIAA1107Q9UPP5 1409 aa19.4■□□□□ 0.7
HMGCL-203ENST00000374490 WASHC2AQ641Q2 1341 aa19.4■□□□□ 0.7
HMGCL-203ENST00000374490 MADDQ8WXG6 1647 aa19.39■□□□□ 0.69
HMGCL-203ENST00000374490 MAGI2Q86UL8 1455 aa19.38■□□□□ 0.69
HMGCL-203ENST00000374490 ABCC1P33527 1531 aa19.37■□□□□ 0.69
HMGCL-203ENST00000374490 ZMYM4Q5VZL5 1548 aa19.37■□□□□ 0.69
HMGCL-203ENST00000374490 MAST1Q9Y2H9 1570 aa19.37■□□□□ 0.69
HMGCL-203ENST00000374490 ZFYVE16Q7Z3T8 1539 aa19.36■□□□□ 0.69
HMGCL-203ENST00000374490 FBXO41Q8TF61 875 aa19.36■□□□□ 0.69
HMGCL-203ENST00000374490 SCAPERQ9BY12 1400 aa19.36■□□□□ 0.69
HMGCL-203ENST00000374490 NEFLP07196 543 aa19.36■□□□□ 0.69
HMGCL-203ENST00000374490 YEATS2Q9ULM3 1422 aa19.35■□□□□ 0.69
HMGCL-203ENST00000374490 CCDC7Q96M83 1385 aa19.35■□□□□ 0.69
HMGCL-203ENST00000374490 RICTORQ6R327 1708 aa19.35■□□□□ 0.69
HMGCL-203ENST00000374490 FOXD1Q16676 465 aa19.35■□□□□ 0.69
HMGCL-203ENST00000374490 PLPPR3Q6T4P5 718 aa19.34■□□□□ 0.69
HMGCL-203ENST00000374490 ANKRD50Q9ULJ7 1429 aa19.34■□□□□ 0.69
HMGCL-203ENST00000374490 KDM5DQ9BY66 1539 aa19.34■□□□□ 0.69
HMGCL-203ENST00000374490 LMTK3Q96Q04 1460 aa19.34■□□□□ 0.69
HMGCL-203ENST00000374490 MLECQ14165 292 aa19.33■□□□□ 0.68
HMGCL-203ENST00000374490 SPATA31E1Q6ZUB1 1445 aa19.32■□□□□ 0.68
HMGCL-203ENST00000374490 KIF15Q9NS87 1388 aa19.32■□□□□ 0.68
HMGCL-203ENST00000374490 POLR1AO95602 1720 aaPredicted RBP19.31■□□□□ 0.68
HMGCL-203ENST00000374490 PLXNC1O60486 1568 aa19.3■□□□□ 0.68
HMGCL-203ENST00000374490 MYT1Q01538 1121 aa19.3■□□□□ 0.68
HMGCL-203ENST00000374490 NBPF8Q3BBV2 869 aa19.3■□□□□ 0.68
HMGCL-203ENST00000374490 ARHGEF12Q9NZN5 1544 aa19.3■□□□□ 0.68
HMGCL-203ENST00000374490 RIMS1Q86UR5 1692 aaKnown RBP19.29■□□□□ 0.68
HMGCL-203ENST00000374490 HSPA2P54652 639 aa19.27■□□□□ 0.68
HMGCL-203ENST00000374490 ATP10AO60312 1499 aa19.26■□□□□ 0.67
HMGCL-203ENST00000374490 FKBP8Q14318 412 aa19.25■□□□□ 0.67
HMGCL-203ENST00000374490 UHRF1BP1Q6BDS2 1440 aa19.25■□□□□ 0.67
HMGCL-203ENST00000374490 PKD2Q13563 968 aa19.25■□□□□ 0.67
HMGCL-203ENST00000374490 MYT1LQ9UL68 1186 aa19.24■□□□□ 0.67
HMGCL-203ENST00000374490 TRAPPC8Q9Y2L5 1435 aa19.24■□□□□ 0.67
HMGCL-203ENST00000374490 ZNF518AQ6AHZ1 1483 aa19.23■□□□□ 0.67
HMGCL-203ENST00000374490 DUOX2Q9NRD8 1548 aa19.22■□□□□ 0.67
HMGCL-203ENST00000374490 NUP155O75694 1391 aa19.21■□□□□ 0.67
HMGCL-203ENST00000374490 KIF7Q2M1P5 1343 aa19.21■□□□□ 0.67
HMGCL-203ENST00000374490 AFAP1Q8N556 730 aa19.21■□□□□ 0.67
HMGCL-203ENST00000374490 PRKRIP1Q9H875 184 aaPredicted RBP19.2■□□□□ 0.66
HMGCL-203ENST00000374490 RALGAPBQ86X10 1494 aa19.19■□□□□ 0.66
HMGCL-203ENST00000374490 RTEL1-TNFRSF6BF6WH68 1400 aa19.19■□□□□ 0.66
HMGCL-203ENST00000374490 SPAG9O60271 1321 aaKnown RBP19.19■□□□□ 0.66
HMGCL-203ENST00000374490 HNRNPUQ00839 825 aaKnown RBP eCLIP19.19■□□□□ 0.66
HMGCL-203ENST00000374490 SIGLEC1Q9BZZ2 1709 aa19.18■□□□□ 0.66
HMGCL-203ENST00000374490 C11orf95C9JLR9 678 aaPredicted RBP19.18■□□□□ 0.66
HMGCL-203ENST00000374490 ERBINQ96RT1 1412 aa19.17■□□□□ 0.66
HMGCL-203ENST00000374490 USP47Q96K76 1375 aa19.17■□□□□ 0.66
HMGCL-203ENST00000374490 UNC13BO14795 1591 aa19.17■□□□□ 0.66
HMGCL-203ENST00000374490 INO80Q9ULG1 1556 aaPredicted RBP19.17■□□□□ 0.66
HMGCL-203ENST00000374490 ATP7AQ04656 1500 aa19.17■□□□□ 0.66
HMGCL-203ENST00000374490 KDM5CP41229 1560 aa19.16■□□□□ 0.66
HMGCL-203ENST00000374490 TSHZ2Q9NRE2 1034 aa19.16■□□□□ 0.66
HMGCL-203ENST00000374490 ROCK2O75116 1388 aaKnown RBP19.16■□□□□ 0.66
HMGCL-203ENST00000374490 CEBPAP49715 358 aaPredicted RBP19.14■□□□□ 0.66
HMGCL-203ENST00000374490 FER1L4A9Z1Z3 1794 aa19.14■□□□□ 0.65
HMGCL-203ENST00000374490 ERICH6BQ5W0A0 696 aa19.12■□□□□ 0.65
HMGCL-203ENST00000374490 ESF1Q9H501 851 aaKnown RBP19.11■□□□□ 0.65
HMGCL-203ENST00000374490 FAM135AQ9P2D6 1515 aa19.11■□□□□ 0.65
HMGCL-203ENST00000374490 MLH3Q9UHC1 1453 aa19.11■□□□□ 0.65
HMGCL-203ENST00000374490 CERKQ8TCT0 537 aa19.1■□□□□ 0.65
HMGCL-203ENST00000374490 BCANQ96GW7 911 aa19.1■□□□□ 0.65
HMGCL-203ENST00000374490 MRS2Q9HD23 443 aa19.1■□□□□ 0.65
HMGCL-203ENST00000374490 IQGAP3Q86VI3 1631 aa19.08■□□□□ 0.65
HMGCL-203ENST00000374490 DMRT2Q9Y5R5 561 aa19.08■□□□□ 0.65
HMGCL-203ENST00000374490 ZBED9Q6R2W3 1325 aa19.08■□□□□ 0.64
HMGCL-203ENST00000374490 DIP2CQ9Y2E4 1556 aa19.07■□□□□ 0.64
HMGCL-203ENST00000374490 DHX29Q7Z478 1369 aaKnown RBP19.07■□□□□ 0.64
HMGCL-203ENST00000374490 REREQ9P2R6 1566 aa19.07■□□□□ 0.64
HMGCL-203ENST00000374490 KIDINS220Q9ULH0 1771 aa19.06■□□□□ 0.64
HMGCL-203ENST00000374490 EIF2AK4Q9P2K8 1649 aaKnown RBP19.05■□□□□ 0.64
HMGCL-203ENST00000374490 ZNF326Q5BKZ1 582 aaKnown RBP19.05■□□□□ 0.64
HMGCL-203ENST00000374490 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.03■□□□□ 0.64
HMGCL-203ENST00000374490 CARD11Q9BXL7 1154 aa19.03■□□□□ 0.64
HMGCL-203ENST00000374490 PREX1Q8TCU6 1659 aa19.03■□□□□ 0.64
HMGCL-203ENST00000374490 AGLP35573 1532 aa19.03■□□□□ 0.64
HMGCL-203ENST00000374490 KTN1Q86UP2 1357 aaKnown RBP19.03■□□□□ 0.64
HMGCL-203ENST00000374490 CCDC184Q52MB2 194 aa19.02■□□□□ 0.64
HMGCL-203ENST00000374490 CCDC144AA2RUR9 1427 aa19.02■□□□□ 0.63
HMGCL-203ENST00000374490 DEPDC5O75140 1603 aa19.02■□□□□ 0.63
HMGCL-203ENST00000374490 ABCA6Q8N139 1617 aa19.02■□□□□ 0.63
HMGCL-203ENST00000374490 FAM9BQ8IZU0 186 aa19■□□□□ 0.63
HMGCL-203ENST00000374490 LAMC1P11047 1609 aa18.99■□□□□ 0.63
HMGCL-203ENST00000374490 PRAG1Q86YV5 1406 aa18.98■□□□□ 0.63
HMGCL-203ENST00000374490 KANK1Q14678 1352 aa18.97■□□□□ 0.63
HMGCL-203ENST00000374490 A2MP01023 1474 aa18.97■□□□□ 0.63
HMGCL-203ENST00000374490 DCAF11Q8TEB1 546 aa18.96■□□□□ 0.63
HMGCL-203ENST00000374490 TRPM1Q7Z4N2 1603 aa18.96■□□□□ 0.62
HMGCL-203ENST00000374490 GPRASP1Q5JY77 1395 aa18.95■□□□□ 0.62
HMGCL-203ENST00000374490 PRDM15P57071 1507 aaPredicted RBP18.95■□□□□ 0.62
HMGCL-203ENST00000374490 KIF3BO15066 747 aa18.93■□□□□ 0.62
HMGCL-203ENST00000374490 TET3O43151 1660 aa18.93■□□□□ 0.62
HMGCL-203ENST00000374490 E9PCH4 1651 aa18.93■□□□□ 0.62
HMGCL-203ENST00000374490 PTPRTO14522 1441 aa18.93■□□□□ 0.62
HMGCL-203ENST00000374490 KDM2AQ9Y2K7 1162 aa18.92■□□□□ 0.62
HMGCL-203ENST00000374490 SMG6Q86US8 1419 aaKnown RBP18.92■□□□□ 0.62
HMGCL-203ENST00000374490 RNF17Q9BXT8 1623 aaKnown RBP18.92■□□□□ 0.62
HMGCL-203ENST00000374490 PLA2R1Q13018 1463 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms