RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 A2MP01023 1474 aa17.21■□□□□ 0.35
HMGCL-202ENST00000374487 CEBPAP49715 358 aaPredicted RBP17.21■□□□□ 0.35
HMGCL-202ENST00000374487 RSPH4AQ5TD94 716 aa17.21■□□□□ 0.35
HMGCL-202ENST00000374487 GCC2Q8IWJ2 1684 aa17.21■□□□□ 0.34
HMGCL-202ENST00000374487 RTEL1-TNFRSF6BF6WH68 1400 aa17.2■□□□□ 0.34
HMGCL-202ENST00000374487 DNMT1P26358 1616 aaKnown RBP17.2■□□□□ 0.34
HMGCL-202ENST00000374487 GGT6Q6P531 493 aa17.19■□□□□ 0.34
HMGCL-202ENST00000374487 PTPRMP28827 1452 aa17.19■□□□□ 0.34
HMGCL-202ENST00000374487 ROCK1Q13464 1354 aa17.19■□□□□ 0.34
HMGCL-202ENST00000374487 RIMS1Q86UR5 1692 aaKnown RBP17.18■□□□□ 0.34
HMGCL-202ENST00000374487 ADGBQ8N7X0 1667 aa17.17■□□□□ 0.34
HMGCL-202ENST00000374487 REREQ9P2R6 1566 aa17.17■□□□□ 0.34
HMGCL-202ENST00000374487 MPHOSPH9Q99550 1183 aa17.17■□□□□ 0.34
HMGCL-202ENST00000374487 PLXNC1O60486 1568 aa17.16■□□□□ 0.34
HMGCL-202ENST00000374487 KIF3BO15066 747 aa17.16■□□□□ 0.34
HMGCL-202ENST00000374487 DHX29Q7Z478 1369 aaKnown RBP17.16■□□□□ 0.34
HMGCL-202ENST00000374487 AGLP35573 1532 aa17.15■□□□□ 0.34
HMGCL-202ENST00000374487 DDX10Q13206 875 aaKnown RBP17.14■□□□□ 0.33
HMGCL-202ENST00000374487 HIRIP3Q9BW71 556 aaPredicted RBP17.13■□□□□ 0.33
HMGCL-202ENST00000374487 MAST1Q9Y2H9 1570 aa17.13■□□□□ 0.33
HMGCL-202ENST00000374487 FER1L4A9Z1Z3 1794 aa17.13■□□□□ 0.33
HMGCL-202ENST00000374487 CROCC2H7BZ55 1655 aa17.12■□□□□ 0.33
HMGCL-202ENST00000374487 KIF15Q9NS87 1388 aa17.11■□□□□ 0.33
HMGCL-202ENST00000374487 NCOA1Q15788 1441 aa17.11■□□□□ 0.33
HMGCL-202ENST00000374487 ADGRL2O95490 1459 aa17.09■□□□□ 0.33
HMGCL-202ENST00000374487 SHANK2Q9UPX8 1470 aa17.09■□□□□ 0.33
HMGCL-202ENST00000374487 FOXD1Q16676 465 aa17.08■□□□□ 0.33
HMGCL-202ENST00000374487 ESF1Q9H501 851 aaKnown RBP17.08■□□□□ 0.33
HMGCL-202ENST00000374487 SLC4A1APQ9BWU0 796 aaKnown RBP17.08■□□□□ 0.32
HMGCL-202ENST00000374487 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.05■□□□□ 0.32
HMGCL-202ENST00000374487 ANKRD30AQ9BXX3 1397 aa17.05■□□□□ 0.32
HMGCL-202ENST00000374487 CLTCQ00610 1675 aaKnown RBP17.04■□□□□ 0.32
HMGCL-202ENST00000374487 ZMYM3Q14202 1370 aa17.04■□□□□ 0.32
HMGCL-202ENST00000374487 DUOX2Q9NRD8 1548 aa17.04■□□□□ 0.32
HMGCL-202ENST00000374487 HSPA2P54652 639 aa17.02■□□□□ 0.32
HMGCL-202ENST00000374487 C3P01024 1663 aa17.02■□□□□ 0.31
HMGCL-202ENST00000374487 WASHC2CQ9Y4E1 1318 aa17.02■□□□□ 0.31
HMGCL-202ENST00000374487 FBXO31Q5XUX0 539 aaPredicted RBP17.02■□□□□ 0.31
HMGCL-202ENST00000374487 ANKRD30BQ9BXX2 1392 aa17.01■□□□□ 0.31
HMGCL-202ENST00000374487 L3MBTL2Q969R5 705 aa17.01■□□□□ 0.31
HMGCL-202ENST00000374487 MROH1Q8NDA8 1641 aa17■□□□□ 0.31
HMGCL-202ENST00000374487 ANP32CO43423 234 aa16.98■□□□□ 0.31
HMGCL-202ENST00000374487 ERBINQ96RT1 1412 aa16.98■□□□□ 0.31
HMGCL-202ENST00000374487 ANKRD50Q9ULJ7 1429 aa16.97■□□□□ 0.31
HMGCL-202ENST00000374487 LMTK3Q96Q04 1460 aa16.97■□□□□ 0.31
HMGCL-202ENST00000374487 CNTLNQ9NXG0 1405 aa16.97■□□□□ 0.31
HMGCL-202ENST00000374487 RPRD2Q5VT52 1461 aaKnown RBP16.97■□□□□ 0.31
HMGCL-202ENST00000374487 EIF4G2P78344 907 aaKnown RBP eCLIP16.96■□□□□ 0.31
HMGCL-202ENST00000374487 RNF17Q9BXT8 1623 aaKnown RBP16.96■□□□□ 0.31
HMGCL-202ENST00000374487 EIF2AK4Q9P2K8 1649 aaKnown RBP16.95■□□□□ 0.3
HMGCL-202ENST00000374487 KDM5DQ9BY66 1539 aa16.95■□□□□ 0.3
HMGCL-202ENST00000374487 HSPA5P11021 654 aaKnown RBP16.95■□□□□ 0.3
HMGCL-202ENST00000374487 ABCC3O15438 1527 aa16.94■□□□□ 0.3
HMGCL-202ENST00000374487 PPP6R1Q9UPN7 881 aa16.94■□□□□ 0.3
HMGCL-202ENST00000374487 PZPP20742 1482 aa16.94■□□□□ 0.3
HMGCL-202ENST00000374487 CEP152O94986 1710 aa16.92■□□□□ 0.3
HMGCL-202ENST00000374487 MROH2AA6NES4 1674 aa16.92■□□□□ 0.3
HMGCL-202ENST00000374487 PKD2Q13563 968 aa16.92■□□□□ 0.3
HMGCL-202ENST00000374487 CCER2I3L3R5 266 aa16.9■□□□□ 0.3
HMGCL-202ENST00000374487 PRDM15P57071 1507 aaPredicted RBP16.9■□□□□ 0.3
HMGCL-202ENST00000374487 NUP155O75694 1391 aa16.89■□□□□ 0.3
HMGCL-202ENST00000374487 DEPDC5O75140 1603 aa16.89■□□□□ 0.29
HMGCL-202ENST00000374487 UHRF1BP1Q6BDS2 1440 aa16.87■□□□□ 0.29
HMGCL-202ENST00000374487 NBPF8Q3BBV2 869 aa16.87■□□□□ 0.29
HMGCL-202ENST00000374487 CFAP65Q6ZU64 1925 aaKnown RBP16.87■□□□□ 0.29
HMGCL-202ENST00000374487 PREX1Q8TCU6 1659 aa16.86■□□□□ 0.29
HMGCL-202ENST00000374487 WASHC2AQ641Q2 1341 aa16.86■□□□□ 0.29
HMGCL-202ENST00000374487 NPATQ14207 1427 aa16.86■□□□□ 0.29
HMGCL-202ENST00000374487 CAMSAP1Q5T5Y3 1602 aa16.86■□□□□ 0.29
HMGCL-202ENST00000374487 VWDEQ8N2E2 1590 aa16.85■□□□□ 0.29
HMGCL-202ENST00000374487 KANK1Q14678 1352 aa16.85■□□□□ 0.29
HMGCL-202ENST00000374487 TNRQ92752 1358 aa16.85■□□□□ 0.29
HMGCL-202ENST00000374487 ZC3H13Q5T200 1668 aaKnown RBP16.82■□□□□ 0.28
HMGCL-202ENST00000374487 MYO3AQ8NEV4 1616 aa16.82■□□□□ 0.28
HMGCL-202ENST00000374487 ERVK-7P63135 1459 aa16.82■□□□□ 0.28
HMGCL-202ENST00000374487 SETD1BQ9UPS6 1966 aaKnown RBP16.81■□□□□ 0.28
HMGCL-202ENST00000374487 FAM135AQ9P2D6 1515 aa16.81■□□□□ 0.28
HMGCL-202ENST00000374487 UNC13BO14795 1591 aa16.81■□□□□ 0.28
HMGCL-202ENST00000374487 ZNF326Q5BKZ1 582 aaKnown RBP16.8■□□□□ 0.28
HMGCL-202ENST00000374487 LMTK2Q8IWU2 1503 aa16.79■□□□□ 0.28
HMGCL-202ENST00000374487 NCKAP5LQ9HCH0 1330 aa16.79■□□□□ 0.28
HMGCL-202ENST00000374487 SPATA31D1Q6ZQQ2 1576 aa16.78■□□□□ 0.28
HMGCL-202ENST00000374487 CEP170BQ9Y4F5 1589 aaPredicted RBP16.78■□□□□ 0.28
HMGCL-202ENST00000374487 ARHGAP31Q2M1Z3 1444 aa16.78■□□□□ 0.28
HMGCL-202ENST00000374487 EFCAB6Q5THR3 1501 aa16.78■□□□□ 0.28
HMGCL-202ENST00000374487 PELP1Q8IZL8 1130 aaKnown RBP16.77■□□□□ 0.28
HMGCL-202ENST00000374487 C11orf95C9JLR9 678 aaPredicted RBP16.77■□□□□ 0.27
HMGCL-202ENST00000374487 CCDC7Q96M83 1385 aa16.76■□□□□ 0.27
HMGCL-202ENST00000374487 IDI1Q13907 227 aa16.75■□□□□ 0.27
HMGCL-202ENST00000374487 A2ML1A8K2U0 1454 aa16.75■□□□□ 0.27
HMGCL-202ENST00000374487 STRCQ7RTU9 1775 aa16.75■□□□□ 0.27
HMGCL-202ENST00000374487 IQGAP3Q86VI3 1631 aa16.74■□□□□ 0.27
HMGCL-202ENST00000374487 SYNMO15061 1565 aa16.74■□□□□ 0.27
HMGCL-202ENST00000374487 SPATA31E1Q6ZUB1 1445 aa16.74■□□□□ 0.27
HMGCL-202ENST00000374487 E9PCH4 1651 aa16.73■□□□□ 0.27
HMGCL-202ENST00000374487 UGGT1Q9NYU2 1555 aa16.73■□□□□ 0.27
HMGCL-202ENST00000374487 TET3O43151 1660 aa16.73■□□□□ 0.27
HMGCL-202ENST00000374487 SENP3Q9H4L4 574 aaPredicted RBP16.72■□□□□ 0.27
HMGCL-202ENST00000374487 NOS1P29475 1434 aa16.72■□□□□ 0.27
HMGCL-202ENST00000374487 ZNF142P52746 1687 aaPredicted RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms