RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 TEX14Q8IWB6 1497 aa22.85■■□□□ 1.25
NIPAL3-204ENST00000374399 PKD2Q13563 968 aa22.84■■□□□ 1.25
NIPAL3-204ENST00000374399 EIF2AK4Q9P2K8 1649 aaKnown RBP22.84■■□□□ 1.25
NIPAL3-204ENST00000374399 DNAJC5Q9H3Z4 198 aa22.83■■□□□ 1.25
NIPAL3-204ENST00000374399 TIMELESSQ9UNS1 1208 aa22.83■■□□□ 1.25
NIPAL3-204ENST00000374399 MROH1Q8NDA8 1641 aa22.81■■□□□ 1.24
NIPAL3-204ENST00000374399 A2MP01023 1474 aa22.8■■□□□ 1.24
NIPAL3-204ENST00000374399 DIP2CQ9Y2E4 1556 aa22.8■■□□□ 1.24
NIPAL3-204ENST00000374399 ZMYM4Q5VZL5 1548 aa22.8■■□□□ 1.24
NIPAL3-204ENST00000374399 MYT1LQ9UL68 1186 aa22.79■■□□□ 1.24
NIPAL3-204ENST00000374399 VWDEQ8N2E2 1590 aa22.78■■□□□ 1.24
NIPAL3-204ENST00000374399 RPRD2Q5VT52 1461 aaKnown RBP22.78■■□□□ 1.24
NIPAL3-204ENST00000374399 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.78■■□□□ 1.24
NIPAL3-204ENST00000374399 COL17A1Q9UMD9 1497 aaPredicted RBP22.77■■□□□ 1.24
NIPAL3-204ENST00000374399 BCORL1Q5H9F3 1711 aa22.76■■□□□ 1.23
NIPAL3-204ENST00000374399 YEATS2Q9ULM3 1422 aa22.76■■□□□ 1.23
NIPAL3-204ENST00000374399 PRDM15P57071 1507 aaPredicted RBP22.75■■□□□ 1.23
NIPAL3-204ENST00000374399 RNF17Q9BXT8 1623 aaKnown RBP22.75■■□□□ 1.23
NIPAL3-204ENST00000374399 TONSLQ96HA7 1378 aa22.74■■□□□ 1.23
NIPAL3-204ENST00000374399 PPP1R15AO75807 674 aaPredicted RBP22.74■■□□□ 1.23
NIPAL3-204ENST00000374399 KIF3BO15066 747 aa22.73■■□□□ 1.23
NIPAL3-204ENST00000374399 PLA2R1Q13018 1463 aa22.72■■□□□ 1.23
NIPAL3-204ENST00000374399 E9PCH4 1651 aa22.7■■□□□ 1.22
NIPAL3-204ENST00000374399 TET3O43151 1660 aa22.68■■□□□ 1.22
NIPAL3-204ENST00000374399 ATP10AO60312 1499 aa22.66■■□□□ 1.22
NIPAL3-204ENST00000374399 L3MBTL2Q969R5 705 aa22.65■■□□□ 1.22
NIPAL3-204ENST00000374399 LMTK2Q8IWU2 1503 aa22.64■■□□□ 1.21
NIPAL3-204ENST00000374399 CEP152O94986 1710 aa22.63■■□□□ 1.21
NIPAL3-204ENST00000374399 KANK1Q14678 1352 aa22.62■■□□□ 1.21
NIPAL3-204ENST00000374399 SIGLEC1Q9BZZ2 1709 aa22.61■■□□□ 1.21
NIPAL3-204ENST00000374399 REREQ9P2R6 1566 aa22.61■■□□□ 1.21
NIPAL3-204ENST00000374399 ZNF316A6NFI3 1004 aaPredicted RBP22.61■■□□□ 1.21
NIPAL3-204ENST00000374399 EFCAB6Q5THR3 1501 aa22.59■■□□□ 1.21
NIPAL3-204ENST00000374399 PTPRTO14522 1441 aa22.58■■□□□ 1.21
NIPAL3-204ENST00000374399 SPHKAPQ2M3C7 1700 aa22.58■■□□□ 1.21
NIPAL3-204ENST00000374399 ARHGEF40Q8TER5 1519 aa22.57■■□□□ 1.2
NIPAL3-204ENST00000374399 ABCC3O15438 1527 aa22.56■■□□□ 1.2
NIPAL3-204ENST00000374399 TRPM2O94759 1503 aa22.56■■□□□ 1.2
NIPAL3-204ENST00000374399 CCDC144AA2RUR9 1427 aa22.55■■□□□ 1.2
NIPAL3-204ENST00000374399 GGT6Q6P531 493 aa22.55■■□□□ 1.2
NIPAL3-204ENST00000374399 AGLP35573 1532 aa22.54■■□□□ 1.2
NIPAL3-204ENST00000374399 NBPF8Q3BBV2 869 aa22.52■■□□□ 1.2
NIPAL3-204ENST00000374399 TRHP20396 242 aaPredicted RBP22.51■■□□□ 1.19
NIPAL3-204ENST00000374399 CLTCL1P53675 1640 aa22.51■■□□□ 1.19
NIPAL3-204ENST00000374399 CAMSAP1Q5T5Y3 1602 aa22.5■■□□□ 1.19
NIPAL3-204ENST00000374399 NPATQ14207 1427 aa22.49■■□□□ 1.19
NIPAL3-204ENST00000374399 ZC3H13Q5T200 1668 aaKnown RBP22.49■■□□□ 1.19
NIPAL3-204ENST00000374399 SPATA31E1Q6ZUB1 1445 aa22.47■■□□□ 1.19
NIPAL3-204ENST00000374399 WASHC2CQ9Y4E1 1318 aa22.46■■□□□ 1.19
NIPAL3-204ENST00000374399 UHRF1BP1Q6BDS2 1440 aa22.45■■□□□ 1.18
NIPAL3-204ENST00000374399 UGGT1Q9NYU2 1555 aa22.44■■□□□ 1.18
NIPAL3-204ENST00000374399 CFAP65Q6ZU64 1925 aaKnown RBP22.44■■□□□ 1.18
NIPAL3-204ENST00000374399 ARHGAP31Q2M1Z3 1444 aa22.43■■□□□ 1.18
NIPAL3-204ENST00000374399 NOS1P29475 1434 aa22.4■■□□□ 1.18
NIPAL3-204ENST00000374399 NEURL4Q96JN8 1562 aa22.39■■□□□ 1.17
NIPAL3-204ENST00000374399 RGL3Q3MIN7 710 aa22.38■■□□□ 1.17
NIPAL3-204ENST00000374399 DCAF11Q8TEB1 546 aa22.38■■□□□ 1.17
NIPAL3-204ENST00000374399 SYNMO15061 1565 aa22.37■■□□□ 1.17
NIPAL3-204ENST00000374399 CNTLNQ9NXG0 1405 aa22.37■■□□□ 1.17
NIPAL3-204ENST00000374399 MROH2AA6NES4 1674 aa22.35■■□□□ 1.17
NIPAL3-204ENST00000374399 CLTCQ00610 1675 aaKnown RBP22.35■■□□□ 1.17
NIPAL3-204ENST00000374399 PPP6R1Q9UPN7 881 aa22.35■■□□□ 1.17
NIPAL3-204ENST00000374399 PIK3C2BO00750 1634 aa22.35■■□□□ 1.17
NIPAL3-204ENST00000374399 KIF1BO60333 1816 aa22.35■■□□□ 1.17
NIPAL3-204ENST00000374399 HIRIP3Q9BW71 556 aaPredicted RBP22.34■■□□□ 1.17
NIPAL3-204ENST00000374399 KDM2AQ9Y2K7 1162 aa22.34■■□□□ 1.17
NIPAL3-204ENST00000374399 PRAG1Q86YV5 1406 aa22.34■■□□□ 1.17
NIPAL3-204ENST00000374399 RALGAPBQ86X10 1494 aa22.34■■□□□ 1.17
NIPAL3-204ENST00000374399 PREX1Q8TCU6 1659 aa22.34■■□□□ 1.17
NIPAL3-204ENST00000374399 DIEXFQ68CQ4 756 aaKnown RBP22.33■■□□□ 1.17
NIPAL3-204ENST00000374399 TRPM1Q7Z4N2 1603 aa22.31■■□□□ 1.16
NIPAL3-204ENST00000374399 ADGRB3O60242 1522 aa22.31■■□□□ 1.16
NIPAL3-204ENST00000374399 ZNF326Q5BKZ1 582 aaKnown RBP22.31■■□□□ 1.16
NIPAL3-204ENST00000374399 IFT172Q9UG01 1749 aa22.3■■□□□ 1.16
NIPAL3-204ENST00000374399 MLECQ14165 292 aa22.29■■□□□ 1.16
NIPAL3-204ENST00000374399 HSPA5P11021 654 aaKnown RBP22.28■■□□□ 1.16
NIPAL3-204ENST00000374399 MADDQ8WXG6 1647 aa22.28■■□□□ 1.16
NIPAL3-204ENST00000374399 ERVK-7P63135 1459 aa22.26■■□□□ 1.15
NIPAL3-204ENST00000374399 FBXO31Q5XUX0 539 aaPredicted RBP22.26■■□□□ 1.15
NIPAL3-204ENST00000374399 EIF4G2P78344 907 aaKnown RBP eCLIP22.25■■□□□ 1.15
NIPAL3-204ENST00000374399 SPATA31D1Q6ZQQ2 1576 aa22.23■■□□□ 1.15
NIPAL3-204ENST00000374399 PPLO60437 1756 aa22.21■■□□□ 1.15
NIPAL3-204ENST00000374399 MYOM2P54296 1465 aa22.21■■□□□ 1.15
NIPAL3-204ENST00000374399 GPRASP1Q5JY77 1395 aa22.21■■□□□ 1.15
NIPAL3-204ENST00000374399 ARID4BQ4LE39 1312 aaPredicted RBP22.2■■□□□ 1.15
NIPAL3-204ENST00000374399 IDI1Q13907 227 aa22.2■■□□□ 1.14
NIPAL3-204ENST00000374399 NBPF1Q3BBV0 1214 aa22.2■■□□□ 1.14
NIPAL3-204ENST00000374399 MYO5BQ9ULV0 1848 aa22.19■■□□□ 1.14
NIPAL3-204ENST00000374399 STAC3Q96MF2 364 aa22.19■■□□□ 1.14
NIPAL3-204ENST00000374399 LAMC1P11047 1609 aa22.19■■□□□ 1.14
NIPAL3-204ENST00000374399 ZMYM3Q14202 1370 aa22.19■■□□□ 1.14
NIPAL3-204ENST00000374399 USP47Q96K76 1375 aa22.19■■□□□ 1.14
NIPAL3-204ENST00000374399 NRXN1Q9ULB1 1477 aa22.18■■□□□ 1.14
NIPAL3-204ENST00000374399 TMEM131LA2VDJ0 1609 aa22.18■■□□□ 1.14
NIPAL3-204ENST00000374399 SLC52A1Q9NWF4 448 aa22.18■■□□□ 1.14
NIPAL3-204ENST00000374399 ROCK2O75116 1388 aaKnown RBP22.17■■□□□ 1.14
NIPAL3-204ENST00000374399 CARD11Q9BXL7 1154 aa22.16■■□□□ 1.14
NIPAL3-204ENST00000374399 C11orf95C9JLR9 678 aaPredicted RBP22.15■■□□□ 1.14
NIPAL3-204ENST00000374399 ADGRF5Q8IZF2 1346 aa22.15■■□□□ 1.14
NIPAL3-204ENST00000374399 KIAA1210Q9ULL0 1709 aa22.14■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms