RNA–Protein interactions for RNA: ENST00000374274.7

SNX12-202, Transcript of sorting nexin 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX12, Length 2,376 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-202ENST00000374274 RCAN3Q9UKA8 241 aa17.74■□□□□ 0.43
SNX12-202ENST00000374274 INSRP06213 1382 aa17.74■□□□□ 0.43
SNX12-202ENST00000374274 ATP10BO94823 1461 aa17.74■□□□□ 0.43
SNX12-202ENST00000374274 ZMYM4Q5VZL5 1548 aa17.73■□□□□ 0.43
SNX12-202ENST00000374274 BRPF3Q9ULD4 1205 aa17.73■□□□□ 0.43
SNX12-202ENST00000374274 USP47Q96K76 1375 aa17.72■□□□□ 0.43
SNX12-202ENST00000374274 NFKBIBQ15653 356 aa17.72■□□□□ 0.43
SNX12-202ENST00000374274 PLEKHD1A6NEE1 506 aa17.72■□□□□ 0.43
SNX12-202ENST00000374274 FAM43AQ8N2R8 423 aa17.72■□□□□ 0.43
SNX12-202ENST00000374274 GPATCH8Q9UKJ3 1502 aaKnown RBP17.72■□□□□ 0.43
SNX12-202ENST00000374274 ABCC5O15440 1437 aa17.71■□□□□ 0.42
SNX12-202ENST00000374274 ZNF644Q9H582 1327 aaPredicted RBP17.7■□□□□ 0.42
SNX12-202ENST00000374274 RALBP1Q15311 655 aa17.7■□□□□ 0.42
SNX12-202ENST00000374274 MYBBP1AQ9BQG0 1328 aaKnown RBP17.7■□□□□ 0.42
SNX12-202ENST00000374274 CFDP1Q9UEE9 299 aaPredicted RBP17.69■□□□□ 0.42
SNX12-202ENST00000374274 CAMSAP2Q08AD1 1489 aa17.69■□□□□ 0.42
SNX12-202ENST00000374274 E9PCH4 1651 aa17.68■□□□□ 0.42
SNX12-202ENST00000374274 UHRF1BP1Q6BDS2 1440 aa17.67■□□□□ 0.42
SNX12-202ENST00000374274 FRAT1Q92837 279 aaPredicted RBP17.66■□□□□ 0.42
SNX12-202ENST00000374274 CDC42BPAQ5VT25 1732 aa17.66■□□□□ 0.42
SNX12-202ENST00000374274 RALGAPBQ86X10 1494 aa17.66■□□□□ 0.42
SNX12-202ENST00000374274 ABCC10Q5T3U5 1492 aa17.65■□□□□ 0.42
SNX12-202ENST00000374274 CLASP1Q7Z460 1538 aa17.63■□□□□ 0.41
SNX12-202ENST00000374274 PLEKHH2Q8IVE3 1493 aa17.63■□□□□ 0.41
SNX12-202ENST00000374274 FOXD1Q16676 465 aa17.63■□□□□ 0.41
SNX12-202ENST00000374274 DAXXQ9UER7 740 aaPredicted RBP17.63■□□□□ 0.41
SNX12-202ENST00000374274 ERCC6L2Q5T890 1561 aa17.63■□□□□ 0.41
SNX12-202ENST00000374274 CROCC2H7BZ55 1655 aa17.62■□□□□ 0.41
SNX12-202ENST00000374274 ADGBQ8N7X0 1667 aa17.62■□□□□ 0.41
SNX12-202ENST00000374274 PZPP20742 1482 aa17.62■□□□□ 0.41
SNX12-202ENST00000374274 ZNF777Q9ULD5 760 aaPredicted RBP17.61■□□□□ 0.41
SNX12-202ENST00000374274 ARHGEF12Q9NZN5 1544 aa17.61■□□□□ 0.41
SNX12-202ENST00000374274 SLC4A1APQ9BWU0 796 aaKnown RBP17.6■□□□□ 0.41
SNX12-202ENST00000374274 KIAA1107Q9UPP5 1409 aa17.59■□□□□ 0.41
SNX12-202ENST00000374274 EIF5BO60841 1220 aaKnown RBP17.59■□□□□ 0.41
SNX12-202ENST00000374274 ABCC2Q92887 1545 aa17.59■□□□□ 0.41
SNX12-202ENST00000374274 NLRP13Q86W25 1043 aa17.58■□□□□ 0.4
SNX12-202ENST00000374274 ADGRL2O95490 1459 aa17.57■□□□□ 0.4
SNX12-202ENST00000374274 KDM2BQ8NHM5 1336 aa17.57■□□□□ 0.4
SNX12-202ENST00000374274 PARD3Q8TEW0 1356 aa17.57■□□□□ 0.4
SNX12-202ENST00000374274 BLMP54132 1417 aaPredicted RBP17.56■□□□□ 0.4
SNX12-202ENST00000374274 FAM161AQ3B820 660 aa17.55■□□□□ 0.4
SNX12-202ENST00000374274 CENPQQ7L2Z9 268 aaPredicted RBP17.55■□□□□ 0.4
SNX12-202ENST00000374274 PREX2Q70Z35 1606 aa17.54■□□□□ 0.4
SNX12-202ENST00000374274 SHANK2Q9UPX8 1470 aa17.53■□□□□ 0.4
SNX12-202ENST00000374274 ANKRD30AQ9BXX3 1397 aa17.53■□□□□ 0.4
SNX12-202ENST00000374274 CDC42BPBQ9Y5S2 1711 aa17.52■□□□□ 0.4
SNX12-202ENST00000374274 GLIPR1L2Q4G1C9 344 aa17.51■□□□□ 0.39
SNX12-202ENST00000374274 CRBNQ96SW2 442 aa17.51■□□□□ 0.39
SNX12-202ENST00000374274 ARHGEF5Q12774 1597 aa17.5■□□□□ 0.39
SNX12-202ENST00000374274 SLC24A1O60721 1099 aa17.5■□□□□ 0.39
SNX12-202ENST00000374274 POLR3GLQ9BT43 218 aa17.5■□□□□ 0.39
SNX12-202ENST00000374274 UHRF1BP1LA0JNW5 1464 aa17.49■□□□□ 0.39
SNX12-202ENST00000374274 C8orf34Q49A92 452 aa17.49■□□□□ 0.39
SNX12-202ENST00000374274 C9orf84Q5VXU9 1444 aa17.48■□□□□ 0.39
SNX12-202ENST00000374274 TTC37Q6PGP7 1564 aa17.48■□□□□ 0.39
SNX12-202ENST00000374274 SAMD9LQ8IVG5 1584 aa17.48■□□□□ 0.39
SNX12-202ENST00000374274 VIRMAQ69YN4 1812 aaKnown RBP17.47■□□□□ 0.39
SNX12-202ENST00000374274 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.47■□□□□ 0.39
SNX12-202ENST00000374274 ZCCHC11Q5TAX3 1644 aaKnown RBP17.47■□□□□ 0.39
SNX12-202ENST00000374274 FRAT2O75474 233 aaPredicted RBP17.47■□□□□ 0.39
SNX12-202ENST00000374274 L1TD1Q5T7N2 865 aaKnown RBP17.47■□□□□ 0.39
SNX12-202ENST00000374274 TSPY4P0CV99 314 aa17.46■□□□□ 0.39
SNX12-202ENST00000374274 TSPY10P0CW01 314 aa17.46■□□□□ 0.39
SNX12-202ENST00000374274 ANKRD50Q9ULJ7 1429 aa17.46■□□□□ 0.38
SNX12-202ENST00000374274 DCAF11Q8TEB1 546 aa17.45■□□□□ 0.38
SNX12-202ENST00000374274 CARD11Q9BXL7 1154 aa17.45■□□□□ 0.38
SNX12-202ENST00000374274 MYO5CQ9NQX4 1742 aa17.45■□□□□ 0.38
SNX12-202ENST00000374274 HNRNPMP52272 730 aaKnown RBP eCLIP17.45■□□□□ 0.38
SNX12-202ENST00000374274 ARHGAP5Q13017 1502 aa17.44■□□□□ 0.38
SNX12-202ENST00000374274 CNGB1Q14028 1251 aaPredicted RBP17.44■□□□□ 0.38
SNX12-202ENST00000374274 CCDC141Q6ZP82 1450 aa17.43■□□□□ 0.38
SNX12-202ENST00000374274 SLC4A3P48751 1232 aa17.43■□□□□ 0.38
SNX12-202ENST00000374274 RSPH4AQ5TD94 716 aa17.43■□□□□ 0.38
SNX12-202ENST00000374274 CDCA7LQ96GN5 454 aa17.43■□□□□ 0.38
SNX12-202ENST00000374274 KDM5DQ9BY66 1539 aa17.42■□□□□ 0.38
SNX12-202ENST00000374274 SENP3-EIF4A1A0A087X0R7 540 aa17.41■□□□□ 0.38
SNX12-202ENST00000374274 PLIN1O60240 522 aa17.41■□□□□ 0.38
SNX12-202ENST00000374274 PKNOX2Q96KN3 472 aa17.41■□□□□ 0.38
SNX12-202ENST00000374274 EIF3AQ14152 1382 aaKnown RBP17.4■□□□□ 0.38
SNX12-202ENST00000374274 SYCP2Q9BX26 1530 aa17.4■□□□□ 0.38
SNX12-202ENST00000374274 LAMC1P11047 1609 aa17.4■□□□□ 0.38
SNX12-202ENST00000374274 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.39■□□□□ 0.38
SNX12-202ENST00000374274 ST20-MTHFSA0A0A6YYL1 179 aa17.39■□□□□ 0.37
SNX12-202ENST00000374274 ZNF326Q5BKZ1 582 aaKnown RBP17.38■□□□□ 0.37
SNX12-202ENST00000374274 PER1O15534 1290 aaPredicted RBP17.37■□□□□ 0.37
SNX12-202ENST00000374274 PKD2Q13563 968 aa17.37■□□□□ 0.37
SNX12-202ENST00000374274 MAST1Q9Y2H9 1570 aa17.37■□□□□ 0.37
SNX12-202ENST00000374274 SKAP1Q86WV1 359 aa17.36■□□□□ 0.37
SNX12-202ENST00000374274 BECN1Q14457 450 aa17.35■□□□□ 0.37
SNX12-202ENST00000374274 TRPM1Q7Z4N2 1603 aa17.35■□□□□ 0.37
SNX12-202ENST00000374274 PLCH2O75038 1416 aa17.35■□□□□ 0.37
SNX12-202ENST00000374274 COL17A1Q9UMD9 1497 aaPredicted RBP17.35■□□□□ 0.37
SNX12-202ENST00000374274 RRAGDQ9NQL2 400 aaPredicted RBP17.34■□□□□ 0.37
SNX12-202ENST00000374274 NUP155O75694 1391 aa17.34■□□□□ 0.37
SNX12-202ENST00000374274 C20orf194Q5TEA3 1177 aa17.33■□□□□ 0.36
SNX12-202ENST00000374274 RRP9O43818 475 aaKnown RBP17.32■□□□□ 0.36
SNX12-202ENST00000374274 ZMYM3Q14202 1370 aa17.32■□□□□ 0.36
SNX12-202ENST00000374274 GPRASP1Q5JY77 1395 aa17.31■□□□□ 0.36
SNX12-202ENST00000374274 CLCN1P35523 988 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms