RNA–Protein interactions for RNA: ENST00000373645.3

SP140-202, Transcript of SP140 nuclear body protein, humanhuman

TSL 1 (best) BASIC

Gene SP140, Length 814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-202ENST00000373645 PLA2R1Q13018 1463 aa12.32□□□□□ -0.44
SP140-202ENST00000373645 UBAP1LF5GYI3 381 aa12.31□□□□□ -0.44
SP140-202ENST00000373645 ZNF644Q9H582 1327 aaPredicted RBP12.31□□□□□ -0.44
SP140-202ENST00000373645 GGT6Q6P531 493 aa12.3□□□□□ -0.44
SP140-202ENST00000373645 KIAA1107Q9UPP5 1409 aa12.29□□□□□ -0.44
SP140-202ENST00000373645 CFDP1Q9UEE9 299 aaPredicted RBP12.29□□□□□ -0.44
SP140-202ENST00000373645 CCNB3Q8WWL7 1395 aa12.28□□□□□ -0.44
SP140-202ENST00000373645 TIAM1Q13009 1591 aa12.27□□□□□ -0.44
SP140-202ENST00000373645 NEURL4Q96JN8 1562 aa12.27□□□□□ -0.44
SP140-202ENST00000373645 DNMT1P26358 1616 aaKnown RBP12.27□□□□□ -0.44
SP140-202ENST00000373645 PLEKHH2Q8IVE3 1493 aa12.27□□□□□ -0.45
SP140-202ENST00000373645 PKD2Q13563 968 aa12.26□□□□□ -0.45
SP140-202ENST00000373645 A2ML1A8K2U0 1454 aa12.26□□□□□ -0.45
SP140-202ENST00000373645 MBD5Q9P267 1494 aa12.26□□□□□ -0.45
SP140-202ENST00000373645 ADGBQ8N7X0 1667 aa12.26□□□□□ -0.45
SP140-202ENST00000373645 FBXO31Q5XUX0 539 aaPredicted RBP12.25□□□□□ -0.45
SP140-202ENST00000373645 MED1Q15648 1581 aaPredicted RBP12.25□□□□□ -0.45
SP140-202ENST00000373645 HSPA1LP34931 641 aa12.24□□□□□ -0.45
SP140-202ENST00000373645 MTUS2Q5JR59 1369 aa12.24□□□□□ -0.45
SP140-202ENST00000373645 POLR1AO95602 1720 aaPredicted RBP12.23□□□□□ -0.45
SP140-202ENST00000373645 PIP4K2BP78356 416 aa12.22□□□□□ -0.45
SP140-202ENST00000373645 ALKQ9UM73 1620 aa12.22□□□□□ -0.45
SP140-202ENST00000373645 TNRQ92752 1358 aa12.21□□□□□ -0.45
SP140-202ENST00000373645 CEP162Q5TB80 1403 aa12.2□□□□□ -0.46
SP140-202ENST00000373645 VWDEQ8N2E2 1590 aa12.2□□□□□ -0.46
SP140-202ENST00000373645 EHBP1L1Q8N3D4 1523 aa12.2□□□□□ -0.46
SP140-202ENST00000373645 PZPP20742 1482 aa12.2□□□□□ -0.46
SP140-202ENST00000373645 SHANK2Q9UPX8 1470 aa12.2□□□□□ -0.46
SP140-202ENST00000373645 DHX29Q7Z478 1369 aaKnown RBP12.19□□□□□ -0.46
SP140-202ENST00000373645 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.19□□□□□ -0.46
SP140-202ENST00000373645 KIF3BO15066 747 aa12.19□□□□□ -0.46
SP140-202ENST00000373645 KDM5DQ9BY66 1539 aa12.19□□□□□ -0.46
SP140-202ENST00000373645 CPS1P31327 1500 aa12.18□□□□□ -0.46
SP140-202ENST00000373645 RTEL1-TNFRSF6BF6WH68 1400 aa12.18□□□□□ -0.46
SP140-202ENST00000373645 CAMSAP2Q08AD1 1489 aa12.17□□□□□ -0.46
SP140-202ENST00000373645 CCDC141Q6ZP82 1450 aa12.17□□□□□ -0.46
SP140-202ENST00000373645 STRCP1A6NGW2 1772 aa12.16□□□□□ -0.46
SP140-202ENST00000373645 NCBP3Q53F19 620 aaKnown RBP12.16□□□□□ -0.46
SP140-202ENST00000373645 NCOA2Q15596 1464 aa12.14□□□□□ -0.47
SP140-202ENST00000373645 UGGT1Q9NYU2 1555 aa12.14□□□□□ -0.47
SP140-202ENST00000373645 NPHP4O75161 1426 aaPredicted RBP12.14□□□□□ -0.47
SP140-202ENST00000373645 MIA2Q96PC5 1412 aa12.14□□□□□ -0.47
SP140-202ENST00000373645 TOM1O60784 492 aa12.13□□□□□ -0.47
SP140-202ENST00000373645 MED14O60244 1454 aa12.13□□□□□ -0.47
SP140-202ENST00000373645 IQGAP1P46940 1657 aa12.13□□□□□ -0.47
SP140-202ENST00000373645 WASHC2CQ9Y4E1 1318 aa12.12□□□□□ -0.47
SP140-202ENST00000373645 FAM135AQ9P2D6 1515 aa12.12□□□□□ -0.47
SP140-202ENST00000373645 DEPDC5O75140 1603 aa12.12□□□□□ -0.47
SP140-202ENST00000373645 ANKLE2Q86XL3 938 aa12.12□□□□□ -0.47
SP140-202ENST00000373645 NLRP1Q9C000 1473 aa12.12□□□□□ -0.47
SP140-202ENST00000373645 ABCC3O15438 1527 aa12.11□□□□□ -0.47
SP140-202ENST00000373645 CAPN15O75808 1086 aa12.11□□□□□ -0.47
SP140-202ENST00000373645 DSG3P32926 999 aa12.11□□□□□ -0.47
SP140-202ENST00000373645 LRRC7Q96NW7 1537 aa12.11□□□□□ -0.47
SP140-202ENST00000373645 MROH1Q8NDA8 1641 aa12.1□□□□□ -0.47
SP140-202ENST00000373645 RNF17Q9BXT8 1623 aaKnown RBP12.1□□□□□ -0.47
SP140-202ENST00000373645 ARHGEF5Q12774 1597 aa12.09□□□□□ -0.47
SP140-202ENST00000373645 ERVK-7P63135 1459 aa12.09□□□□□ -0.47
SP140-202ENST00000373645 ZC3H13Q5T200 1668 aaKnown RBP12.08□□□□□ -0.48
SP140-202ENST00000373645 THEMISQ8N1K5 641 aaPredicted RBP12.08□□□□□ -0.48
SP140-202ENST00000373645 CEP152O94986 1710 aa12.07□□□□□ -0.48
SP140-202ENST00000373645 SYNMO15061 1565 aa12.06□□□□□ -0.48
SP140-202ENST00000373645 CFAP65Q6ZU64 1925 aaKnown RBP12.06□□□□□ -0.48
SP140-202ENST00000373645 UBR1Q8IWV7 1749 aa12.05□□□□□ -0.48
SP140-202ENST00000373645 RGS17Q9UGC6 210 aaPredicted RBP12.04□□□□□ -0.48
SP140-202ENST00000373645 MAST1Q9Y2H9 1570 aa12.04□□□□□ -0.48
SP140-202ENST00000373645 XIRP1Q702N8 1843 aaKnown RBP12.04□□□□□ -0.48
SP140-202ENST00000373645 VPS8Q8N3P4 1428 aa12.03□□□□□ -0.48
SP140-202ENST00000373645 SCAF11Q99590 1463 aaKnown RBP12.03□□□□□ -0.48
SP140-202ENST00000373645 LTKP29376 864 aa12.03□□□□□ -0.48
SP140-202ENST00000373645 SPINK5Q9NQ38 1064 aaPredicted RBP12.03□□□□□ -0.48
SP140-202ENST00000373645 U3KPZ7 1027 aaPredicted RBP12.03□□□□□ -0.48
SP140-202ENST00000373645 EIF2AK4Q9P2K8 1649 aaKnown RBP12.02□□□□□ -0.49
SP140-202ENST00000373645 LRRC9Q6ZRR7 1453 aa12.02□□□□□ -0.49
SP140-202ENST00000373645 ARHGAP23Q9P227 1491 aa12.02□□□□□ -0.49
SP140-202ENST00000373645 TSPY4P0CV99 314 aa12.01□□□□□ -0.49
SP140-202ENST00000373645 TSPY10P0CW01 314 aa12.01□□□□□ -0.49
SP140-202ENST00000373645 RSPH4AQ5TD94 716 aa12.01□□□□□ -0.49
SP140-202ENST00000373645 KANK4Q5T7N3 995 aaPredicted RBP12□□□□□ -0.49
SP140-202ENST00000373645 SLIT1O75093 1534 aa12□□□□□ -0.49
SP140-202ENST00000373645 PRDM15P57071 1507 aaPredicted RBP11.99□□□□□ -0.49
SP140-202ENST00000373645 PIK3C2BO00750 1634 aa11.98□□□□□ -0.49
SP140-202ENST00000373645 DUOX2Q9NRD8 1548 aa11.97□□□□□ -0.49
SP140-202ENST00000373645 MYOM3Q5VTT5 1437 aa11.97□□□□□ -0.49
SP140-202ENST00000373645 APLP2Q06481 763 aa11.97□□□□□ -0.49
SP140-202ENST00000373645 TXNDC2Q86VQ3 553 aa11.97□□□□□ -0.49
SP140-202ENST00000373645 RBM33Q96EV2 1170 aaKnown RBP11.97□□□□□ -0.49
SP140-202ENST00000373645 MAP3K1Q13233 1512 aa11.96□□□□□ -0.5
SP140-202ENST00000373645 TMEM94Q12767 1356 aa11.95□□□□□ -0.5
SP140-202ENST00000373645 KIF15Q9NS87 1388 aa11.95□□□□□ -0.5
SP140-202ENST00000373645 CROCC2H7BZ55 1655 aa11.95□□□□□ -0.5
SP140-202ENST00000373645 POTEAQ6S8J7 498 aa11.95□□□□□ -0.5
SP140-202ENST00000373645 ARHGAP31Q2M1Z3 1444 aa11.94□□□□□ -0.5
SP140-202ENST00000373645 TMEM2Q9UHN6 1383 aa11.94□□□□□ -0.5
SP140-202ENST00000373645 ABCC5O15440 1437 aa11.94□□□□□ -0.5
SP140-202ENST00000373645 RRP7BPQ9NSQ0 103 aa11.93□□□□□ -0.5
SP140-202ENST00000373645 SETD1AO15047 1707 aaKnown RBP11.93□□□□□ -0.5
SP140-202ENST00000373645 ROBO1Q9Y6N7 1651 aa11.93□□□□□ -0.5
SP140-202ENST00000373645 NPM3O75607 178 aaKnown RBP11.92□□□□□ -0.5
SP140-202ENST00000373645 FAM135BQ49AJ0 1406 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms