RNA–Protein interactions for RNA: ENST00000373377.1

CSMD2-203, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2 BASIC

Gene CSMD2, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-203ENST00000373377 NEFMP07197 916 aa13.07□□□□□ -0.32
CSMD2-203ENST00000373377 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.07□□□□□ -0.32
CSMD2-203ENST00000373377 MBD5Q9P267 1494 aa13.07□□□□□ -0.32
CSMD2-203ENST00000373377 ANO8Q9HCE9 1232 aaPredicted RBP13.07□□□□□ -0.32
CSMD2-203ENST00000373377 USP47Q96K76 1375 aa13.07□□□□□ -0.32
CSMD2-203ENST00000373377 UHRF1BP1LA0JNW5 1464 aa13.06□□□□□ -0.32
CSMD2-203ENST00000373377 ANKRD30BQ9BXX2 1392 aa13.06□□□□□ -0.32
CSMD2-203ENST00000373377 RPRD2Q5VT52 1461 aaKnown RBP13.05□□□□□ -0.32
CSMD2-203ENST00000373377 SMG6Q86US8 1419 aaKnown RBP13.05□□□□□ -0.32
CSMD2-203ENST00000373377 PNISRQ8TF01 805 aaKnown RBP13.04□□□□□ -0.32
CSMD2-203ENST00000373377 PTPRGP23470 1445 aa13.04□□□□□ -0.32
CSMD2-203ENST00000373377 ST20-MTHFSA0A0A6YYL1 179 aa13.04□□□□□ -0.32
CSMD2-203ENST00000373377 FBLN2P98095 1184 aa13.04□□□□□ -0.32
CSMD2-203ENST00000373377 PLXNC1O60486 1568 aa13.04□□□□□ -0.32
CSMD2-203ENST00000373377 CFDP1Q9UEE9 299 aaPredicted RBP13.03□□□□□ -0.32
CSMD2-203ENST00000373377 CDCA7LQ96GN5 454 aa13.03□□□□□ -0.32
CSMD2-203ENST00000373377 UNC13BO14795 1591 aa13.03□□□□□ -0.32
CSMD2-203ENST00000373377 SLC4A3P48751 1232 aa13.02□□□□□ -0.32
CSMD2-203ENST00000373377 DCAF11Q8TEB1 546 aa13.02□□□□□ -0.32
CSMD2-203ENST00000373377 RCAN3Q9UKA8 241 aa13.02□□□□□ -0.32
CSMD2-203ENST00000373377 RGL3Q3MIN7 710 aa13.02□□□□□ -0.33
CSMD2-203ENST00000373377 CC2D1BQ5T0F9 858 aaKnown RBP13.01□□□□□ -0.33
CSMD2-203ENST00000373377 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.01□□□□□ -0.33
CSMD2-203ENST00000373377 PDE4AP27815 886 aa13.01□□□□□ -0.33
CSMD2-203ENST00000373377 RRP1P56182 461 aaKnown RBP13.01□□□□□ -0.33
CSMD2-203ENST00000373377 DHX29Q7Z478 1369 aaKnown RBP13□□□□□ -0.33
CSMD2-203ENST00000373377 C9orf84Q5VXU9 1444 aa12.99□□□□□ -0.33
CSMD2-203ENST00000373377 SYCP2Q9BX26 1530 aa12.98□□□□□ -0.33
CSMD2-203ENST00000373377 CCDC141Q6ZP82 1450 aa12.97□□□□□ -0.33
CSMD2-203ENST00000373377 SPATA31E1Q6ZUB1 1445 aa12.97□□□□□ -0.33
CSMD2-203ENST00000373377 DAXXQ9UER7 740 aaPredicted RBP12.97□□□□□ -0.33
CSMD2-203ENST00000373377 ARAP3Q8WWN8 1544 aa12.96□□□□□ -0.33
CSMD2-203ENST00000373377 MAGI2Q86UL8 1455 aa12.96□□□□□ -0.33
CSMD2-203ENST00000373377 IQGAP3Q86VI3 1631 aa12.95□□□□□ -0.34
CSMD2-203ENST00000373377 ABCC1P33527 1531 aa12.95□□□□□ -0.34
CSMD2-203ENST00000373377 ABCA9Q8IUA7 1624 aa12.94□□□□□ -0.34
CSMD2-203ENST00000373377 ARHGEF12Q9NZN5 1544 aa12.94□□□□□ -0.34
CSMD2-203ENST00000373377 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.94□□□□□ -0.34
CSMD2-203ENST00000373377 KIAA1107Q9UPP5 1409 aa12.94□□□□□ -0.34
CSMD2-203ENST00000373377 NUP155O75694 1391 aa12.94□□□□□ -0.34
CSMD2-203ENST00000373377 ANKRD30AQ9BXX3 1397 aa12.94□□□□□ -0.34
CSMD2-203ENST00000373377 ANKRD50Q9ULJ7 1429 aa12.94□□□□□ -0.34
CSMD2-203ENST00000373377 TCERG1O14776 1098 aaKnown RBP12.94□□□□□ -0.34
CSMD2-203ENST00000373377 CRBNQ96SW2 442 aa12.93□□□□□ -0.34
CSMD2-203ENST00000373377 MYBBP1AQ9BQG0 1328 aaKnown RBP12.93□□□□□ -0.34
CSMD2-203ENST00000373377 PLEKHD1A6NEE1 506 aa12.93□□□□□ -0.34
CSMD2-203ENST00000373377 RNF123Q5XPI4 1314 aa12.92□□□□□ -0.34
CSMD2-203ENST00000373377 KIF15Q9NS87 1388 aa12.92□□□□□ -0.34
CSMD2-203ENST00000373377 RGS3P49796 1198 aa12.91□□□□□ -0.34
CSMD2-203ENST00000373377 BACH2Q9BYV9 841 aa12.91□□□□□ -0.34
CSMD2-203ENST00000373377 ARHGAP5Q13017 1502 aa12.91□□□□□ -0.34
CSMD2-203ENST00000373377 DEPDC5O75140 1603 aa12.9□□□□□ -0.34
CSMD2-203ENST00000373377 PRKCSHP14314 528 aaPredicted RBP12.9□□□□□ -0.34
CSMD2-203ENST00000373377 KDM5CP41229 1560 aa12.9□□□□□ -0.34
CSMD2-203ENST00000373377 FAM135AQ9P2D6 1515 aa12.9□□□□□ -0.34
CSMD2-203ENST00000373377 ROCK2O75116 1388 aaKnown RBP12.9□□□□□ -0.34
CSMD2-203ENST00000373377 C20orf194Q5TEA3 1177 aa12.9□□□□□ -0.34
CSMD2-203ENST00000373377 BRPF3Q9ULD4 1205 aa12.9□□□□□ -0.34
CSMD2-203ENST00000373377 RALBP1Q15311 655 aa12.88□□□□□ -0.35
CSMD2-203ENST00000373377 NBPF1Q3BBV0 1214 aa12.88□□□□□ -0.35
CSMD2-203ENST00000373377 BCORL1Q5H9F3 1711 aa12.88□□□□□ -0.35
CSMD2-203ENST00000373377 PLEKHH2Q8IVE3 1493 aa12.88□□□□□ -0.35
CSMD2-203ENST00000373377 EIF5BO60841 1220 aaKnown RBP12.88□□□□□ -0.35
CSMD2-203ENST00000373377 NLRP13Q86W25 1043 aa12.88□□□□□ -0.35
CSMD2-203ENST00000373377 PLCH2O75038 1416 aa12.88□□□□□ -0.35
CSMD2-203ENST00000373377 UHRF1BP1Q6BDS2 1440 aa12.88□□□□□ -0.35
CSMD2-203ENST00000373377 INO80Q9ULG1 1556 aaPredicted RBP12.88□□□□□ -0.35
CSMD2-203ENST00000373377 TSPY4P0CV99 314 aa12.87□□□□□ -0.35
CSMD2-203ENST00000373377 TSPY10P0CW01 314 aa12.87□□□□□ -0.35
CSMD2-203ENST00000373377 HNRNPMP52272 730 aaKnown RBP eCLIP12.87□□□□□ -0.35
CSMD2-203ENST00000373377 ZFYVE16Q7Z3T8 1539 aa12.86□□□□□ -0.35
CSMD2-203ENST00000373377 KTN1Q86UP2 1357 aaKnown RBP12.86□□□□□ -0.35
CSMD2-203ENST00000373377 DUOX2Q9NRD8 1548 aa12.85□□□□□ -0.35
CSMD2-203ENST00000373377 PPM1GO15355 546 aaPredicted RBP12.85□□□□□ -0.35
CSMD2-203ENST00000373377 ARXQ96QS3 562 aa12.84□□□□□ -0.35
CSMD2-203ENST00000373377 PANK3Q9H999 370 aa12.84□□□□□ -0.35
CSMD2-203ENST00000373377 TRPM1Q7Z4N2 1603 aa12.84□□□□□ -0.35
CSMD2-203ENST00000373377 BRD4O60885 1362 aaPredicted RBP12.84□□□□□ -0.35
CSMD2-203ENST00000373377 LAMC1P11047 1609 aa12.84□□□□□ -0.35
CSMD2-203ENST00000373377 E9PCH4 1651 aa12.83□□□□□ -0.36
CSMD2-203ENST00000373377 ERBINQ96RT1 1412 aa12.83□□□□□ -0.36
CSMD2-203ENST00000373377 RALGAPBQ86X10 1494 aa12.83□□□□□ -0.36
CSMD2-203ENST00000373377 ATP10AO60312 1499 aa12.82□□□□□ -0.36
CSMD2-203ENST00000373377 WDR7Q9Y4E6 1490 aa12.82□□□□□ -0.36
CSMD2-203ENST00000373377 NFKBIBQ15653 356 aa12.82□□□□□ -0.36
CSMD2-203ENST00000373377 VWDEQ8N2E2 1590 aa12.82□□□□□ -0.36
CSMD2-203ENST00000373377 PLA2R1Q13018 1463 aa12.82□□□□□ -0.36
CSMD2-203ENST00000373377 CCDC146Q8IYE0 955 aa12.81□□□□□ -0.36
CSMD2-203ENST00000373377 ADAMTS8Q9UP79 889 aa12.81□□□□□ -0.36
CSMD2-203ENST00000373377 EIF2AK4Q9P2K8 1649 aaKnown RBP12.8□□□□□ -0.36
CSMD2-203ENST00000373377 RSPH4AQ5TD94 716 aa12.8□□□□□ -0.36
CSMD2-203ENST00000373377 DDRGK1Q96HY6 314 aa12.8□□□□□ -0.36
CSMD2-203ENST00000373377 MROH1Q8NDA8 1641 aa12.8□□□□□ -0.36
CSMD2-203ENST00000373377 RNF17Q9BXT8 1623 aaKnown RBP12.8□□□□□ -0.36
CSMD2-203ENST00000373377 LRPPRCP42704 1394 aaKnown RBP12.8□□□□□ -0.36
CSMD2-203ENST00000373377 WDR43Q15061 677 aaKnown RBP eCLIP12.8□□□□□ -0.36
CSMD2-203ENST00000373377 ARID4BQ4LE39 1312 aaPredicted RBP12.79□□□□□ -0.36
CSMD2-203ENST00000373377 MS4A1P11836 297 aa12.79□□□□□ -0.36
CSMD2-203ENST00000373377 GSE1Q14687 1217 aa12.79□□□□□ -0.36
CSMD2-203ENST00000373377 FRAT1Q92837 279 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms