RNA–Protein interactions for RNA: ENST00000373298.6

ITM2A-201, Transcript of integral membrane protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITM2A, Length 1,641 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2A-201ENST00000373298 ARHGEF40Q8TER5 1519 aa14.56□□□□□ -0.08
ITM2A-201ENST00000373298 C9orf84Q5VXU9 1444 aa14.56□□□□□ -0.08
ITM2A-201ENST00000373298 ATF5Q9Y2D1 282 aaPredicted RBP14.55□□□□□ -0.08
ITM2A-201ENST00000373298 MAGI2Q86UL8 1455 aa14.53□□□□□ -0.08
ITM2A-201ENST00000373298 TSPY4P0CV99 314 aa14.53□□□□□ -0.08
ITM2A-201ENST00000373298 TSPY10P0CW01 314 aa14.53□□□□□ -0.08
ITM2A-201ENST00000373298 RSPH4AQ5TD94 716 aa14.53□□□□□ -0.08
ITM2A-201ENST00000373298 ADGBQ8N7X0 1667 aa14.53□□□□□ -0.08
ITM2A-201ENST00000373298 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.53□□□□□ -0.08
ITM2A-201ENST00000373298 MAST1Q9Y2H9 1570 aa14.53□□□□□ -0.08
ITM2A-201ENST00000373298 SHANK2Q9UPX8 1470 aa14.51□□□□□ -0.09
ITM2A-201ENST00000373298 RTEL1-TNFRSF6BF6WH68 1400 aa14.51□□□□□ -0.09
ITM2A-201ENST00000373298 RRP7BPQ9NSQ0 103 aa14.51□□□□□ -0.09
ITM2A-201ENST00000373298 ATP10AO60312 1499 aa14.51□□□□□ -0.09
ITM2A-201ENST00000373298 ZBTB12Q9Y330 459 aaPredicted RBP14.5□□□□□ -0.09
ITM2A-201ENST00000373298 NCOA1Q15788 1441 aa14.49□□□□□ -0.09
ITM2A-201ENST00000373298 FOXD4L1Q9NU39 408 aa14.48□□□□□ -0.09
ITM2A-201ENST00000373298 PLXNC1O60486 1568 aa14.48□□□□□ -0.09
ITM2A-201ENST00000373298 ADGRL2O95490 1459 aa14.47□□□□□ -0.09
ITM2A-201ENST00000373298 A2MP01023 1474 aa14.47□□□□□ -0.09
ITM2A-201ENST00000373298 KIF15Q9NS87 1388 aa14.47□□□□□ -0.09
ITM2A-201ENST00000373298 MLECQ14165 292 aa14.45□□□□□ -0.1
ITM2A-201ENST00000373298 REREQ9P2R6 1566 aa14.44□□□□□ -0.1
ITM2A-201ENST00000373298 ARID4BQ4LE39 1312 aaPredicted RBP14.44□□□□□ -0.1
ITM2A-201ENST00000373298 DHX29Q7Z478 1369 aaKnown RBP14.44□□□□□ -0.1
ITM2A-201ENST00000373298 ANKRD30AQ9BXX3 1397 aa14.44□□□□□ -0.1
ITM2A-201ENST00000373298 SP7Q8TDD2 431 aaPredicted RBP14.44□□□□□ -0.1
ITM2A-201ENST00000373298 SLC4A1APQ9BWU0 796 aaKnown RBP14.44□□□□□ -0.1
ITM2A-201ENST00000373298 REM2Q8IYK8 340 aaPredicted RBP14.42□□□□□ -0.1
ITM2A-201ENST00000373298 ROCK1Q13464 1354 aa14.41□□□□□ -0.1
ITM2A-201ENST00000373298 DUOX2Q9NRD8 1548 aa14.41□□□□□ -0.1
ITM2A-201ENST00000373298 KIF3BO15066 747 aa14.41□□□□□ -0.1
ITM2A-201ENST00000373298 AGLP35573 1532 aa14.41□□□□□ -0.1
ITM2A-201ENST00000373298 BCORL1Q5H9F3 1711 aa14.41□□□□□ -0.1
ITM2A-201ENST00000373298 NAIPQ13075 1403 aa14.4□□□□□ -0.1
ITM2A-201ENST00000373298 KDM4FA0A1W2PPD8 638 aa14.4□□□□□ -0.1
ITM2A-201ENST00000373298 MROH1Q8NDA8 1641 aa14.39□□□□□ -0.11
ITM2A-201ENST00000373298 ANKRD50Q9ULJ7 1429 aa14.38□□□□□ -0.11
ITM2A-201ENST00000373298 GGT6Q6P531 493 aa14.38□□□□□ -0.11
ITM2A-201ENST00000373298 GCC2Q8IWJ2 1684 aa14.38□□□□□ -0.11
ITM2A-201ENST00000373298 HFM1A2PYH4 1435 aa14.37□□□□□ -0.11
ITM2A-201ENST00000373298 ADAMTSL3P82987 1691 aa14.37□□□□□ -0.11
ITM2A-201ENST00000373298 MADDQ8WXG6 1647 aa14.37□□□□□ -0.11
ITM2A-201ENST00000373298 PIP4P2Q8N4L2 257 aa14.37□□□□□ -0.11
ITM2A-201ENST00000373298 ERBINQ96RT1 1412 aa14.36□□□□□ -0.11
ITM2A-201ENST00000373298 EIF2AK4Q9P2K8 1649 aaKnown RBP14.36□□□□□ -0.11
ITM2A-201ENST00000373298 TRIM26Q12899 539 aaPredicted RBP14.35□□□□□ -0.11
ITM2A-201ENST00000373298 RNF17Q9BXT8 1623 aaKnown RBP14.34□□□□□ -0.11
ITM2A-201ENST00000373298 FER1L4A9Z1Z3 1794 aa14.33□□□□□ -0.12
ITM2A-201ENST00000373298 DEPDC5O75140 1603 aa14.33□□□□□ -0.12
ITM2A-201ENST00000373298 CLTCQ00610 1675 aaKnown RBP14.32□□□□□ -0.12
ITM2A-201ENST00000373298 RIMS1Q86UR5 1692 aaKnown RBP14.32□□□□□ -0.12
ITM2A-201ENST00000373298 CEP152O94986 1710 aa14.31□□□□□ -0.12
ITM2A-201ENST00000373298 PRDM15P57071 1507 aaPredicted RBP14.3□□□□□ -0.12
ITM2A-201ENST00000373298 CEBPAP49715 358 aaPredicted RBP14.3□□□□□ -0.12
ITM2A-201ENST00000373298 SETD5Q9C0A6 1442 aa14.29□□□□□ -0.12
ITM2A-201ENST00000373298 UNC13BO14795 1591 aa14.29□□□□□ -0.12
ITM2A-201ENST00000373298 RAB3GAP2Q9H2M9 1393 aa14.29□□□□□ -0.12
ITM2A-201ENST00000373298 ABCC3O15438 1527 aa14.29□□□□□ -0.12
ITM2A-201ENST00000373298 VWDEQ8N2E2 1590 aa14.28□□□□□ -0.12
ITM2A-201ENST00000373298 PCGF6Q9BYE7 350 aa14.28□□□□□ -0.12
ITM2A-201ENST00000373298 CFAP65Q6ZU64 1925 aaKnown RBP14.28□□□□□ -0.12
ITM2A-201ENST00000373298 WASHC2CQ9Y4E1 1318 aa14.27□□□□□ -0.13
ITM2A-201ENST00000373298 PTPRMP28827 1452 aa14.26□□□□□ -0.13
ITM2A-201ENST00000373298 KDM5DQ9BY66 1539 aa14.26□□□□□ -0.13
ITM2A-201ENST00000373298 PITPNM1O00562 1244 aa14.26□□□□□ -0.13
ITM2A-201ENST00000373298 FXR2P51116 673 aaKnown RBP eCLIP14.26□□□□□ -0.13
ITM2A-201ENST00000373298 C3P01024 1663 aa14.26□□□□□ -0.13
ITM2A-201ENST00000373298 NUP155O75694 1391 aa14.25□□□□□ -0.13
ITM2A-201ENST00000373298 FBXO31Q5XUX0 539 aaPredicted RBP14.24□□□□□ -0.13
ITM2A-201ENST00000373298 ZMYM3Q14202 1370 aa14.24□□□□□ -0.13
ITM2A-201ENST00000373298 CAMSAP1Q5T5Y3 1602 aa14.23□□□□□ -0.13
ITM2A-201ENST00000373298 IQGAP3Q86VI3 1631 aa14.23□□□□□ -0.13
ITM2A-201ENST00000373298 PZPP20742 1482 aa14.23□□□□□ -0.13
ITM2A-201ENST00000373298 FAM135AQ9P2D6 1515 aa14.23□□□□□ -0.13
ITM2A-201ENST00000373298 TRIM52Q96A61 297 aa14.23□□□□□ -0.13
ITM2A-201ENST00000373298 MROH2AA6NES4 1674 aa14.22□□□□□ -0.13
ITM2A-201ENST00000373298 ESF1Q9H501 851 aaKnown RBP14.22□□□□□ -0.13
ITM2A-201ENST00000373298 ZC3H13Q5T200 1668 aaKnown RBP14.21□□□□□ -0.13
ITM2A-201ENST00000373298 E9PCH4 1651 aa14.2□□□□□ -0.14
ITM2A-201ENST00000373298 LMTK2Q8IWU2 1503 aa14.2□□□□□ -0.14
ITM2A-201ENST00000373298 NPATQ14207 1427 aa14.2□□□□□ -0.14
ITM2A-201ENST00000373298 CNTLNQ9NXG0 1405 aa14.2□□□□□ -0.14
ITM2A-201ENST00000373298 KANK1Q14678 1352 aa14.2□□□□□ -0.14
ITM2A-201ENST00000373298 EFCAB6Q5THR3 1501 aa14.2□□□□□ -0.14
ITM2A-201ENST00000373298 TET3O43151 1660 aa14.19□□□□□ -0.14
ITM2A-201ENST00000373298 ZBTB22O15209 634 aa14.16□□□□□ -0.14
ITM2A-201ENST00000373298 MPHOSPH9Q99550 1183 aa14.16□□□□□ -0.14
ITM2A-201ENST00000373298 PREX1Q8TCU6 1659 aa14.16□□□□□ -0.14
ITM2A-201ENST00000373298 HAX1O00165 279 aa14.15□□□□□ -0.14
ITM2A-201ENST00000373298 PKD2Q13563 968 aa14.15□□□□□ -0.14
ITM2A-201ENST00000373298 ARHGAP31Q2M1Z3 1444 aa14.15□□□□□ -0.14
ITM2A-201ENST00000373298 ERVK-7P63135 1459 aa14.14□□□□□ -0.15
ITM2A-201ENST00000373298 SYNMO15061 1565 aa14.14□□□□□ -0.15
ITM2A-201ENST00000373298 UGGT1Q9NYU2 1555 aa14.14□□□□□ -0.15
ITM2A-201ENST00000373298 ATXN8OSP0DMR3 200 aa14.13□□□□□ -0.15
ITM2A-201ENST00000373298 PLA2R1Q13018 1463 aa14.13□□□□□ -0.15
ITM2A-201ENST00000373298 SPATA31D1Q6ZQQ2 1576 aa14.13□□□□□ -0.15
ITM2A-201ENST00000373298 HRCP23327 699 aa14.12□□□□□ -0.15
ITM2A-201ENST00000373298 SETD1BQ9UPS6 1966 aaKnown RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms