RNA–Protein interactions for RNA: ENST00000373193.7

PTPRT-205, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRT, Length 12,681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-205ENST00000373193 CCDC146Q8IYE0 955 aa11.4□□□□□ -0.58
PTPRT-205ENST00000373193 FOSBP53539 338 aa11.4□□□□□ -0.58
PTPRT-205ENST00000373193 CCDC191Q8NCU4 936 aa11.4□□□□□ -0.59
PTPRT-205ENST00000373193 NAP1L1P55209 391 aaKnown RBP11.39□□□□□ -0.59
PTPRT-205ENST00000373193 SMC4Q9NTJ3 1288 aa11.39□□□□□ -0.59
PTPRT-205ENST00000373193 KTN1Q86UP2 1357 aaKnown RBP11.39□□□□□ -0.59
PTPRT-205ENST00000373193 TPM2P07951 284 aa11.39□□□□□ -0.59
PTPRT-205ENST00000373193 TMF1P82094 1093 aa11.39□□□□□ -0.59
PTPRT-205ENST00000373193 TTLL5Q6EMB2 1281 aa11.38□□□□□ -0.59
PTPRT-205ENST00000373193 DCAF11Q8TEB1 546 aa11.38□□□□□ -0.59
PTPRT-205ENST00000373193 U2AF1L5P0DN76 240 aaPredicted RBP11.38□□□□□ -0.59
PTPRT-205ENST00000373193 U2AF1Q01081 240 aaKnown RBP eCLIP11.38□□□□□ -0.59
PTPRT-205ENST00000373193 MNS1Q8NEH6 495 aa11.38□□□□□ -0.59
PTPRT-205ENST00000373193 CCER2I3L3R5 266 aa11.37□□□□□ -0.59
PTPRT-205ENST00000373193 RILPL2Q969X0 211 aa11.37□□□□□ -0.59
PTPRT-205ENST00000373193 PRKCSHP14314 528 aaPredicted RBP11.37□□□□□ -0.59
PTPRT-205ENST00000373193 SCRIBQ14160 1630 aa11.37□□□□□ -0.59
PTPRT-205ENST00000373193 FAM184AQ8NB25 1140 aa11.36□□□□□ -0.59
PTPRT-205ENST00000373193 CWC15Q9P013 229 aaKnown RBP11.36□□□□□ -0.59
PTPRT-205ENST00000373193 TSPYL1Q9H0U9 437 aa11.36□□□□□ -0.59
PTPRT-205ENST00000373193 HSPA5P11021 654 aaKnown RBP11.35□□□□□ -0.59
PTPRT-205ENST00000373193 SKOR2Q2VWA4 1001 aaPredicted RBP11.35□□□□□ -0.59
PTPRT-205ENST00000373193 HSP90B2PQ58FF3 399 aa11.35□□□□□ -0.59
PTPRT-205ENST00000373193 BRPF3Q9ULD4 1205 aa11.35□□□□□ -0.59
PTPRT-205ENST00000373193 ARGLU1Q9NWB6 273 aaPredicted RBP11.35□□□□□ -0.59
PTPRT-205ENST00000373193 CEP162Q5TB80 1403 aa11.35□□□□□ -0.59
PTPRT-205ENST00000373193 IPO7O95373 1038 aaKnown RBP11.34□□□□□ -0.59
PTPRT-205ENST00000373193 BAZ1BQ9UIG0 1483 aaKnown RBP11.34□□□□□ -0.59
PTPRT-205ENST00000373193 PDE4AP27815 886 aa11.34□□□□□ -0.59
PTPRT-205ENST00000373193 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.34□□□□□ -0.59
PTPRT-205ENST00000373193 CAGE1Q8TC20 777 aa11.34□□□□□ -0.59
PTPRT-205ENST00000373193 MEX3CQ5U5Q3 659 aaKnown RBP11.34□□□□□ -0.59
PTPRT-205ENST00000373193 HMMRO75330 724 aa11.34□□□□□ -0.59
PTPRT-205ENST00000373193 STK26Q9P289 416 aa11.33□□□□□ -0.59
PTPRT-205ENST00000373193 PLIN1O60240 522 aa11.33□□□□□ -0.6
PTPRT-205ENST00000373193 KIF3AQ9Y496 699 aa11.33□□□□□ -0.6
PTPRT-205ENST00000373193 PDILTQ8N807 584 aa11.32□□□□□ -0.6
PTPRT-205ENST00000373193 PAK3O75914 559 aaPredicted RBP11.32□□□□□ -0.6
PTPRT-205ENST00000373193 STK31Q9BXU1 1019 aa11.32□□□□□ -0.6
PTPRT-205ENST00000373193 ACBD3Q9H3P7 528 aa11.32□□□□□ -0.6
PTPRT-205ENST00000373193 IL27Q8NEV9 243 aa11.31□□□□□ -0.6
PTPRT-205ENST00000373193 BICD2Q8TD16 824 aa11.31□□□□□ -0.6
PTPRT-205ENST00000373193 RSF1Q96T23 1441 aaPredicted RBP11.31□□□□□ -0.6
PTPRT-205ENST00000373193 FOXD1Q16676 465 aa11.31□□□□□ -0.6
PTPRT-205ENST00000373193 RAD21O60216 631 aa11.31□□□□□ -0.6
PTPRT-205ENST00000373193 CCDC66A2RUB6 948 aa11.31□□□□□ -0.6
PTPRT-205ENST00000373193 CENPJQ9HC77 1338 aaPredicted RBP11.31□□□□□ -0.6
PTPRT-205ENST00000373193 CFDP1Q9UEE9 299 aaPredicted RBP11.31□□□□□ -0.6
PTPRT-205ENST00000373193 AKAP17AQ02040 695 aaKnown RBP11.31□□□□□ -0.6
PTPRT-205ENST00000373193 RBM25P49756 843 aaKnown RBP11.3□□□□□ -0.6
PTPRT-205ENST00000373193 ANKRD45Q5TZF3 282 aa11.3□□□□□ -0.6
PTPRT-205ENST00000373193 CDR1P51861 262 aa11.3□□□□□ -0.6
PTPRT-205ENST00000373193 CNKSR2Q8WXI2 1034 aa11.3□□□□□ -0.6
PTPRT-205ENST00000373193 FAM161AQ3B820 660 aa11.3□□□□□ -0.6
PTPRT-205ENST00000373193 ERICH4A6NGS2 130 aa11.3□□□□□ -0.6
PTPRT-205ENST00000373193 NASPP49321 788 aaPredicted RBP11.3□□□□□ -0.6
PTPRT-205ENST00000373193 DCTN1Q14203 1278 aa11.3□□□□□ -0.6
PTPRT-205ENST00000373193 RRP7AQ9Y3A4 280 aaKnown RBP11.29□□□□□ -0.6
PTPRT-205ENST00000373193 ATP6V1DQ9Y5K8 247 aa11.29□□□□□ -0.6
PTPRT-205ENST00000373193 TCEAL9Q9UHQ7 104 aa11.29□□□□□ -0.6
PTPRT-205ENST00000373193 RNF214Q8ND24 703 aa11.29□□□□□ -0.6
PTPRT-205ENST00000373193 AXDND1Q5T1B0 1012 aaPredicted RBP11.29□□□□□ -0.6
PTPRT-205ENST00000373193 ANKRD20A12PQ8NF67 263 aa11.29□□□□□ -0.6
PTPRT-205ENST00000373193 FRAT2O75474 233 aaPredicted RBP11.28□□□□□ -0.6
PTPRT-205ENST00000373193 BCL2L13Q9BXK5 485 aa11.28□□□□□ -0.6
PTPRT-205ENST00000373193 ANO2Q9NQ90 1003 aa11.28□□□□□ -0.6
PTPRT-205ENST00000373193 CT47A1Q5JQC4 288 aaPredicted RBP11.28□□□□□ -0.6
PTPRT-205ENST00000373193 HSP90AB2PQ58FF8 381 aa11.28□□□□□ -0.6
PTPRT-205ENST00000373193 IBSPP21815 317 aaPredicted RBP11.28□□□□□ -0.6
PTPRT-205ENST00000373193 AEBP1Q8IUX7 1158 aa11.28□□□□□ -0.6
PTPRT-205ENST00000373193 KRI1Q8N9T8 703 aaKnown RBP11.28□□□□□ -0.6
PTPRT-205ENST00000373193 CHMP7Q8WUX9 453 aaPredicted RBP11.28□□□□□ -0.6
PTPRT-205ENST00000373193 G3V3G9 751 aa11.28□□□□□ -0.6
PTPRT-205ENST00000373193 CSB-PGBD3P0DP91 1061 aa11.28□□□□□ -0.6
PTPRT-205ENST00000373193 DCAF8Q5TAQ9 597 aa11.28□□□□□ -0.6
PTPRT-205ENST00000373193 LEKR1Q6ZMV7 388 aa11.28□□□□□ -0.6
PTPRT-205ENST00000373193 VPS37CA5D8V6 355 aaPredicted RBP11.27□□□□□ -0.61
PTPRT-205ENST00000373193 STK11IPQ8N1F8 1099 aa11.27□□□□□ -0.61
PTPRT-205ENST00000373193 MPNDQ8N594 471 aa11.27□□□□□ -0.61
PTPRT-205ENST00000373193 CCDC39Q9UFE4 941 aa11.26□□□□□ -0.61
PTPRT-205ENST00000373193 SASS6Q6UVJ0 657 aa11.26□□□□□ -0.61
PTPRT-205ENST00000373193 PLEKHD1A6NEE1 506 aa11.26□□□□□ -0.61
PTPRT-205ENST00000373193 KDM4AO75164 1064 aa11.26□□□□□ -0.61
PTPRT-205ENST00000373193 CRBNQ96SW2 442 aa11.26□□□□□ -0.61
PTPRT-205ENST00000373193 ZFYVE27Q5T4F4 411 aa11.26□□□□□ -0.61
PTPRT-205ENST00000373193 TMX4Q9H1E5 349 aaPredicted RBP11.26□□□□□ -0.61
PTPRT-205ENST00000373193 CENPHQ9H3R5 247 aa11.25□□□□□ -0.61
PTPRT-205ENST00000373193 EXOC6Q8TAG9 804 aa11.25□□□□□ -0.61
PTPRT-205ENST00000373193 SPAG9O60271 1321 aaKnown RBP11.25□□□□□ -0.61
PTPRT-205ENST00000373193 PRDM10Q9NQV6 1147 aa11.25□□□□□ -0.61
PTPRT-205ENST00000373193 ODF2Q5BJF6 829 aa11.24□□□□□ -0.61
PTPRT-205ENST00000373193 ROCK2O75116 1388 aaKnown RBP11.24□□□□□ -0.61
PTPRT-205ENST00000373193 DIAPH3Q9NSV4 1193 aa11.24□□□□□ -0.61
PTPRT-205ENST00000373193 FAM193AP78312 1265 aa11.24□□□□□ -0.61
PTPRT-205ENST00000373193 TRIM29Q14134 588 aa11.24□□□□□ -0.61
PTPRT-205ENST00000373193 CENPQQ7L2Z9 268 aaPredicted RBP11.23□□□□□ -0.61
PTPRT-205ENST00000373193 SPC24Q8NBT2 197 aa11.23□□□□□ -0.61
PTPRT-205ENST00000373193 GOLGA3Q08378 1498 aa11.23□□□□□ -0.61
PTPRT-205ENST00000373193 HDGFL2Q7Z4V5 671 aaPredicted RBP11.23□□□□□ -0.61
PTPRT-205ENST00000373193 CT47B1P0C2W7 299 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms