RNA–Protein interactions for RNA: ENST00000373093.4

GRIK3-202, Transcript of glutamate ionotropic receptor kainate type subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GRIK3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK3-202ENST00000373093 C9orf84Q5VXU9 1444 aa14.6□□□□□ -0.07
GRIK3-202ENST00000373093 CEP170Q5SW79 1584 aa14.59□□□□□ -0.07
GRIK3-202ENST00000373093 PRKCSHP14314 528 aaPredicted RBP14.58□□□□□ -0.08
GRIK3-202ENST00000373093 SMG6Q86US8 1419 aaKnown RBP14.58□□□□□ -0.08
GRIK3-202ENST00000373093 SENP3Q9H4L4 574 aaPredicted RBP14.58□□□□□ -0.08
GRIK3-202ENST00000373093 SYNJ2O15056 1496 aa14.57□□□□□ -0.08
GRIK3-202ENST00000373093 ATP10BO94823 1461 aa14.56□□□□□ -0.08
GRIK3-202ENST00000373093 PANK3Q9H999 370 aa14.56□□□□□ -0.08
GRIK3-202ENST00000373093 PDE4AP27815 886 aa14.55□□□□□ -0.08
GRIK3-202ENST00000373093 MYT1LQ9UL68 1186 aa14.55□□□□□ -0.08
GRIK3-202ENST00000373093 MBD5Q9P267 1494 aa14.55□□□□□ -0.08
GRIK3-202ENST00000373093 MYBBP1AQ9BQG0 1328 aaKnown RBP14.54□□□□□ -0.08
GRIK3-202ENST00000373093 CARMIL2Q6F5E8 1435 aa14.54□□□□□ -0.08
GRIK3-202ENST00000373093 RCAN3Q9UKA8 241 aa14.54□□□□□ -0.08
GRIK3-202ENST00000373093 RRP1P56182 461 aaKnown RBP14.53□□□□□ -0.08
GRIK3-202ENST00000373093 KDM5CP41229 1560 aa14.52□□□□□ -0.08
GRIK3-202ENST00000373093 DISP3Q9P2K9 1392 aa14.52□□□□□ -0.09
GRIK3-202ENST00000373093 C20orf194Q5TEA3 1177 aa14.52□□□□□ -0.09
GRIK3-202ENST00000373093 RNF123Q5XPI4 1314 aa14.5□□□□□ -0.09
GRIK3-202ENST00000373093 BRPF3Q9ULD4 1205 aa14.49□□□□□ -0.09
GRIK3-202ENST00000373093 PTPRGP23470 1445 aa14.49□□□□□ -0.09
GRIK3-202ENST00000373093 PER1O15534 1290 aaPredicted RBP14.49□□□□□ -0.09
GRIK3-202ENST00000373093 CCDC144AA2RUR9 1427 aa14.48□□□□□ -0.09
GRIK3-202ENST00000373093 NLRP13Q86W25 1043 aa14.48□□□□□ -0.09
GRIK3-202ENST00000373093 CCDC146Q8IYE0 955 aa14.47□□□□□ -0.09
GRIK3-202ENST00000373093 RALGAPBQ86X10 1494 aa14.47□□□□□ -0.09
GRIK3-202ENST00000373093 KTN1Q86UP2 1357 aaKnown RBP14.47□□□□□ -0.09
GRIK3-202ENST00000373093 RALBP1Q15311 655 aa14.47□□□□□ -0.09
GRIK3-202ENST00000373093 CRBNQ96SW2 442 aa14.47□□□□□ -0.09
GRIK3-202ENST00000373093 ADAMTS8Q9UP79 889 aa14.47□□□□□ -0.09
GRIK3-202ENST00000373093 NUP160Q12769 1436 aa14.46□□□□□ -0.09
GRIK3-202ENST00000373093 ADGRL2O95490 1459 aa14.46□□□□□ -0.09
GRIK3-202ENST00000373093 TESK2Q96S53 571 aa14.46□□□□□ -0.1
GRIK3-202ENST00000373093 ABCC10Q5T3U5 1492 aa14.46□□□□□ -0.1
GRIK3-202ENST00000373093 BACH2Q9BYV9 841 aa14.45□□□□□ -0.1
GRIK3-202ENST00000373093 CDC42BPAQ5VT25 1732 aa14.44□□□□□ -0.1
GRIK3-202ENST00000373093 PLEKHH2Q8IVE3 1493 aa14.44□□□□□ -0.1
GRIK3-202ENST00000373093 AFAP1Q8N556 730 aa14.44□□□□□ -0.1
GRIK3-202ENST00000373093 BRD4O60885 1362 aaPredicted RBP14.43□□□□□ -0.1
GRIK3-202ENST00000373093 LRPPRCP42704 1394 aaKnown RBP14.43□□□□□ -0.1
GRIK3-202ENST00000373093 UHRF1BP1Q6BDS2 1440 aa14.43□□□□□ -0.1
GRIK3-202ENST00000373093 ITSN2Q9NZM3 1697 aa14.42□□□□□ -0.1
GRIK3-202ENST00000373093 PLA2R1Q13018 1463 aa14.42□□□□□ -0.1
GRIK3-202ENST00000373093 ADGBQ8N7X0 1667 aa14.42□□□□□ -0.1
GRIK3-202ENST00000373093 TCERG1O14776 1098 aaKnown RBP14.41□□□□□ -0.1
GRIK3-202ENST00000373093 RGS3P49796 1198 aa14.41□□□□□ -0.1
GRIK3-202ENST00000373093 FAM135AQ9P2D6 1515 aa14.41□□□□□ -0.1
GRIK3-202ENST00000373093 TNNT2P45379 298 aaPredicted RBP14.41□□□□□ -0.1
GRIK3-202ENST00000373093 PRAG1Q86YV5 1406 aa14.41□□□□□ -0.1
GRIK3-202ENST00000373093 ARID4BQ4LE39 1312 aaPredicted RBP14.4□□□□□ -0.1
GRIK3-202ENST00000373093 SYCP2Q9BX26 1530 aa14.4□□□□□ -0.1
GRIK3-202ENST00000373093 EIF5BO60841 1220 aaKnown RBP14.39□□□□□ -0.11
GRIK3-202ENST00000373093 TMF1P82094 1093 aa14.39□□□□□ -0.11
GRIK3-202ENST00000373093 A2MP01023 1474 aa14.39□□□□□ -0.11
GRIK3-202ENST00000373093 CROCC2H7BZ55 1655 aa14.38□□□□□ -0.11
GRIK3-202ENST00000373093 ARHGAP5Q13017 1502 aa14.38□□□□□ -0.11
GRIK3-202ENST00000373093 POLR1AO95602 1720 aaPredicted RBP14.38□□□□□ -0.11
GRIK3-202ENST00000373093 PARD3Q8TEW0 1356 aa14.38□□□□□ -0.11
GRIK3-202ENST00000373093 ABCA8O94911 1581 aa14.37□□□□□ -0.11
GRIK3-202ENST00000373093 NEUROD2Q15784 382 aa14.37□□□□□ -0.11
GRIK3-202ENST00000373093 ARXQ96QS3 562 aa14.37□□□□□ -0.11
GRIK3-202ENST00000373093 KNSTRNQ9Y448 316 aa14.37□□□□□ -0.11
GRIK3-202ENST00000373093 SAMD9LQ8IVG5 1584 aa14.36□□□□□ -0.11
GRIK3-202ENST00000373093 CCDC141Q6ZP82 1450 aa14.36□□□□□ -0.11
GRIK3-202ENST00000373093 SPINK5Q9NQ38 1064 aaPredicted RBP14.36□□□□□ -0.11
GRIK3-202ENST00000373093 NFKBIBQ15653 356 aa14.36□□□□□ -0.11
GRIK3-202ENST00000373093 CHGAP10645 457 aaKnown RBP14.35□□□□□ -0.11
GRIK3-202ENST00000373093 CHD1O14646 1710 aa14.35□□□□□ -0.11
GRIK3-202ENST00000373093 WDR43Q15061 677 aaKnown RBP eCLIP14.35□□□□□ -0.11
GRIK3-202ENST00000373093 FRAT1Q92837 279 aaPredicted RBP14.35□□□□□ -0.11
GRIK3-202ENST00000373093 DAXXQ9UER7 740 aaPredicted RBP14.35□□□□□ -0.11
GRIK3-202ENST00000373093 KDM5DQ9BY66 1539 aa14.34□□□□□ -0.11
GRIK3-202ENST00000373093 ERCC6L2Q5T890 1561 aa14.34□□□□□ -0.11
GRIK3-202ENST00000373093 ERBINQ96RT1 1412 aa14.34□□□□□ -0.11
GRIK3-202ENST00000373093 PPP2R1AP30153 589 aa14.34□□□□□ -0.11
GRIK3-202ENST00000373093 NUTM2DQ5VT03 806 aaPredicted RBP14.34□□□□□ -0.11
GRIK3-202ENST00000373093 DMRT2Q9Y5R5 561 aa14.34□□□□□ -0.11
GRIK3-202ENST00000373093 PLEKHH1Q9ULM0 1364 aa14.33□□□□□ -0.12
GRIK3-202ENST00000373093 CFAP70Q5T0N1 1121 aa14.32□□□□□ -0.12
GRIK3-202ENST00000373093 APAF1O14727 1248 aa14.32□□□□□ -0.12
GRIK3-202ENST00000373093 ADCY10Q96PN6 1610 aa14.32□□□□□ -0.12
GRIK3-202ENST00000373093 ARHGEF12Q9NZN5 1544 aa14.31□□□□□ -0.12
GRIK3-202ENST00000373093 FRAT2O75474 233 aaPredicted RBP14.31□□□□□ -0.12
GRIK3-202ENST00000373093 BCAR3O75815 825 aa14.31□□□□□ -0.12
GRIK3-202ENST00000373093 RRP7AQ9Y3A4 280 aaKnown RBP14.31□□□□□ -0.12
GRIK3-202ENST00000373093 TTC37Q6PGP7 1564 aa14.3□□□□□ -0.12
GRIK3-202ENST00000373093 CDC42BPBQ9Y5S2 1711 aa14.3□□□□□ -0.12
GRIK3-202ENST00000373093 KIF3BO15066 747 aa14.3□□□□□ -0.12
GRIK3-202ENST00000373093 GSE1Q14687 1217 aa14.3□□□□□ -0.12
GRIK3-202ENST00000373093 SHANK2Q9UPX8 1470 aa14.3□□□□□ -0.12
GRIK3-202ENST00000373093 PPM1GO15355 546 aaPredicted RBP14.29□□□□□ -0.12
GRIK3-202ENST00000373093 MAGI2Q86UL8 1455 aa14.29□□□□□ -0.12
GRIK3-202ENST00000373093 TRAPPC8Q9Y2L5 1435 aa14.29□□□□□ -0.12
GRIK3-202ENST00000373093 AMER1Q5JTC6 1135 aaPredicted RBP14.28□□□□□ -0.12
GRIK3-202ENST00000373093 DUSP27Q5VZP5 1158 aa14.28□□□□□ -0.12
GRIK3-202ENST00000373093 COL17A1Q9UMD9 1497 aaPredicted RBP14.27□□□□□ -0.13
GRIK3-202ENST00000373093 PDE3BQ13370 1112 aa14.27□□□□□ -0.13
GRIK3-202ENST00000373093 EFCAB2Q5VUJ9 269 aa14.26□□□□□ -0.13
GRIK3-202ENST00000373093 TRPM1Q7Z4N2 1603 aa14.26□□□□□ -0.13
GRIK3-202ENST00000373093 SPAG9O60271 1321 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms