RNA–Protein interactions for RNA: ENST00000372972.6

CSTF2-201, Transcript of cleavage stimulation factor subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF2, Length 1,958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-201ENST00000372972 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.75■□□□□ 0.59
CSTF2-201ENST00000372972 MAP3K4Q9Y6R4 1608 aa18.74■□□□□ 0.59
CSTF2-201ENST00000372972 GLI2P10070 1586 aa18.74■□□□□ 0.59
CSTF2-201ENST00000372972 MYT1LQ9UL68 1186 aa18.73■□□□□ 0.59
CSTF2-201ENST00000372972 ZNF518AQ6AHZ1 1483 aa18.73■□□□□ 0.59
CSTF2-201ENST00000372972 NEO1Q92859 1461 aa18.73■□□□□ 0.59
CSTF2-201ENST00000372972 SPATA31E1Q6ZUB1 1445 aa18.73■□□□□ 0.59
CSTF2-201ENST00000372972 MAGI2Q86UL8 1455 aa18.72■□□□□ 0.59
CSTF2-201ENST00000372972 IQGAP3Q86VI3 1631 aa18.72■□□□□ 0.59
CSTF2-201ENST00000372972 POGZQ7Z3K3 1410 aa18.71■□□□□ 0.59
CSTF2-201ENST00000372972 KIDINS220Q9ULH0 1771 aa18.7■□□□□ 0.58
CSTF2-201ENST00000372972 UHRF1BP1Q6BDS2 1440 aa18.7■□□□□ 0.58
CSTF2-201ENST00000372972 DIP2BQ9P265 1576 aa18.69■□□□□ 0.58
CSTF2-201ENST00000372972 C11orf95C9JLR9 678 aaPredicted RBP18.69■□□□□ 0.58
CSTF2-201ENST00000372972 FAM69CQ0P6D2 419 aa18.69■□□□□ 0.58
CSTF2-201ENST00000372972 CCDC7Q96M83 1385 aa18.69■□□□□ 0.58
CSTF2-201ENST00000372972 KDM5CP41229 1560 aa18.69■□□□□ 0.58
CSTF2-201ENST00000372972 ZNF326Q5BKZ1 582 aaKnown RBP18.68■□□□□ 0.58
CSTF2-201ENST00000372972 DHX29Q7Z478 1369 aaKnown RBP18.67■□□□□ 0.58
CSTF2-201ENST00000372972 CNTLNQ9NXG0 1405 aa18.65■□□□□ 0.58
CSTF2-201ENST00000372972 MLH3Q9UHC1 1453 aa18.64■□□□□ 0.58
CSTF2-201ENST00000372972 DEPDC5O75140 1603 aa18.64■□□□□ 0.57
CSTF2-201ENST00000372972 CCDC144AA2RUR9 1427 aa18.64■□□□□ 0.57
CSTF2-201ENST00000372972 RAPGEF3O95398 923 aa18.64■□□□□ 0.57
CSTF2-201ENST00000372972 DCAF11Q8TEB1 546 aa18.63■□□□□ 0.57
CSTF2-201ENST00000372972 HECW2Q9P2P5 1572 aa18.63■□□□□ 0.57
CSTF2-201ENST00000372972 EIF2AK4Q9P2K8 1649 aaKnown RBP18.63■□□□□ 0.57
CSTF2-201ENST00000372972 KIF3BO15066 747 aa18.62■□□□□ 0.57
CSTF2-201ENST00000372972 USP47Q96K76 1375 aa18.62■□□□□ 0.57
CSTF2-201ENST00000372972 RALGAPBQ86X10 1494 aa18.62■□□□□ 0.57
CSTF2-201ENST00000372972 KDM2AQ9Y2K7 1162 aa18.62■□□□□ 0.57
CSTF2-201ENST00000372972 KIF7Q2M1P5 1343 aa18.62■□□□□ 0.57
CSTF2-201ENST00000372972 PLA2R1Q13018 1463 aa18.61■□□□□ 0.57
CSTF2-201ENST00000372972 A2MP01023 1474 aa18.6■□□□□ 0.57
CSTF2-201ENST00000372972 RICTORQ6R327 1708 aa18.59■□□□□ 0.57
CSTF2-201ENST00000372972 TSPOAP1O95153 1857 aa18.59■□□□□ 0.57
CSTF2-201ENST00000372972 ATP10AO60312 1499 aa18.58■□□□□ 0.57
CSTF2-201ENST00000372972 PPRC1Q5VV67 1664 aaKnown RBP18.58■□□□□ 0.56
CSTF2-201ENST00000372972 CARD11Q9BXL7 1154 aa18.58■□□□□ 0.56
CSTF2-201ENST00000372972 ABCA6Q8N139 1617 aa18.58■□□□□ 0.56
CSTF2-201ENST00000372972 POLR1AO95602 1720 aaPredicted RBP18.58■□□□□ 0.56
CSTF2-201ENST00000372972 KANK1Q14678 1352 aa18.58■□□□□ 0.56
CSTF2-201ENST00000372972 MROH1Q8NDA8 1641 aa18.57■□□□□ 0.56
CSTF2-201ENST00000372972 VWDEQ8N2E2 1590 aa18.57■□□□□ 0.56
CSTF2-201ENST00000372972 AEBP2Q6ZN18 517 aaPredicted RBP18.57■□□□□ 0.56
CSTF2-201ENST00000372972 ARID4BQ4LE39 1312 aaPredicted RBP18.57■□□□□ 0.56
CSTF2-201ENST00000372972 FRMPD1Q5SYB0 1578 aa18.56■□□□□ 0.56
CSTF2-201ENST00000372972 PRDM15P57071 1507 aaPredicted RBP18.56■□□□□ 0.56
CSTF2-201ENST00000372972 E9PCH4 1651 aa18.56■□□□□ 0.56
CSTF2-201ENST00000372972 RGL3Q3MIN7 710 aa18.54■□□□□ 0.56
CSTF2-201ENST00000372972 TET3O43151 1660 aa18.54■□□□□ 0.56
CSTF2-201ENST00000372972 KIF13AQ9H1H9 1805 aa18.54■□□□□ 0.56
CSTF2-201ENST00000372972 DIP2CQ9Y2E4 1556 aa18.53■□□□□ 0.56
CSTF2-201ENST00000372972 RNF17Q9BXT8 1623 aaKnown RBP18.52■□□□□ 0.56
CSTF2-201ENST00000372972 PRKRIP1Q9H875 184 aaPredicted RBP18.52■□□□□ 0.56
CSTF2-201ENST00000372972 PRAG1Q86YV5 1406 aa18.52■□□□□ 0.56
CSTF2-201ENST00000372972 ROCK2O75116 1388 aaKnown RBP18.51■□□□□ 0.55
CSTF2-201ENST00000372972 BCORL1Q5H9F3 1711 aa18.51■□□□□ 0.55
CSTF2-201ENST00000372972 YEATS2Q9ULM3 1422 aa18.5■□□□□ 0.55
CSTF2-201ENST00000372972 ST20-MTHFSA0A0A6YYL1 179 aa18.48■□□□□ 0.55
CSTF2-201ENST00000372972 PTPRTO14522 1441 aa18.48■□□□□ 0.55
CSTF2-201ENST00000372972 SPHKAPQ2M3C7 1700 aa18.48■□□□□ 0.55
CSTF2-201ENST00000372972 ZMYM4Q5VZL5 1548 aa18.48■□□□□ 0.55
CSTF2-201ENST00000372972 GGT6Q6P531 493 aa18.47■□□□□ 0.55
CSTF2-201ENST00000372972 TRPM2O94759 1503 aa18.46■□□□□ 0.55
CSTF2-201ENST00000372972 LMTK2Q8IWU2 1503 aa18.46■□□□□ 0.55
CSTF2-201ENST00000372972 CEP152O94986 1710 aa18.46■□□□□ 0.55
CSTF2-201ENST00000372972 TRPM1Q7Z4N2 1603 aa18.46■□□□□ 0.55
CSTF2-201ENST00000372972 EFCAB6Q5THR3 1501 aa18.45■□□□□ 0.54
CSTF2-201ENST00000372972 POLR3GLQ9BT43 218 aa18.45■□□□□ 0.54
CSTF2-201ENST00000372972 GPRASP1Q5JY77 1395 aa18.44■□□□□ 0.54
CSTF2-201ENST00000372972 NBPF1Q3BBV0 1214 aa18.42■□□□□ 0.54
CSTF2-201ENST00000372972 CLTCL1P53675 1640 aa18.42■□□□□ 0.54
CSTF2-201ENST00000372972 CCDC184Q52MB2 194 aa18.41■□□□□ 0.54
CSTF2-201ENST00000372972 SUPT16HQ9Y5B9 1047 aaKnown RBP18.41■□□□□ 0.54
CSTF2-201ENST00000372972 ABCC3O15438 1527 aa18.4■□□□□ 0.54
CSTF2-201ENST00000372972 STAC3Q96MF2 364 aa18.4■□□□□ 0.54
CSTF2-201ENST00000372972 WASHC2CQ9Y4E1 1318 aa18.39■□□□□ 0.54
CSTF2-201ENST00000372972 COL17A1Q9UMD9 1497 aaPredicted RBP18.39■□□□□ 0.53
CSTF2-201ENST00000372972 HNRNPUQ00839 825 aaKnown RBP eCLIP18.39■□□□□ 0.53
CSTF2-201ENST00000372972 LAMC1P11047 1609 aa18.39■□□□□ 0.53
CSTF2-201ENST00000372972 MRS2Q9HD23 443 aa18.39■□□□□ 0.53
CSTF2-201ENST00000372972 NPATQ14207 1427 aa18.36■□□□□ 0.53
CSTF2-201ENST00000372972 UGGT1Q9NYU2 1555 aa18.35■□□□□ 0.53
CSTF2-201ENST00000372972 CAMSAP1Q5T5Y3 1602 aa18.35■□□□□ 0.53
CSTF2-201ENST00000372972 REREQ9P2R6 1566 aa18.33■□□□□ 0.53
CSTF2-201ENST00000372972 CFAP65Q6ZU64 1925 aaKnown RBP18.33■□□□□ 0.52
CSTF2-201ENST00000372972 FAM9BQ8IZU0 186 aa18.33■□□□□ 0.52
CSTF2-201ENST00000372972 TESK2Q96S53 571 aa18.31■□□□□ 0.52
CSTF2-201ENST00000372972 ZC3H13Q5T200 1668 aaKnown RBP18.31■□□□□ 0.52
CSTF2-201ENST00000372972 NEURL4Q96JN8 1562 aa18.31■□□□□ 0.52
CSTF2-201ENST00000372972 KIF1BO60333 1816 aa18.3■□□□□ 0.52
CSTF2-201ENST00000372972 AGLP35573 1532 aa18.3■□□□□ 0.52
CSTF2-201ENST00000372972 MADDQ8WXG6 1647 aa18.29■□□□□ 0.52
CSTF2-201ENST00000372972 ARHGEF40Q8TER5 1519 aa18.29■□□□□ 0.52
CSTF2-201ENST00000372972 SIGLEC1Q9BZZ2 1709 aa18.28■□□□□ 0.52
CSTF2-201ENST00000372972 KTN1Q86UP2 1357 aaKnown RBP18.28■□□□□ 0.52
CSTF2-201ENST00000372972 ARHGAP31Q2M1Z3 1444 aa18.28■□□□□ 0.52
CSTF2-201ENST00000372972 NOS1P29475 1434 aa18.27■□□□□ 0.52
CSTF2-201ENST00000372972 TMF1P82094 1093 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms