RNA–Protein interactions for RNA: ENST00000372285.7

CD40-202, Transcript of CD40 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD40, Length 1,729 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-202ENST00000372285 DEPDC5O75140 1603 aa26.03■■□□□ 1.76
CD40-202ENST00000372285 RICTORQ6R327 1708 aa26.03■■□□□ 1.76
CD40-202ENST00000372285 KIF13AQ9H1H9 1805 aa26.03■■□□□ 1.76
CD40-202ENST00000372285 DHX29Q7Z478 1369 aaKnown RBP26■■□□□ 1.75
CD40-202ENST00000372285 TSPOAP1O95153 1857 aa26■■□□□ 1.75
CD40-202ENST00000372285 MYT1LQ9UL68 1186 aa25.97■■□□□ 1.75
CD40-202ENST00000372285 TEX14Q8IWB6 1497 aa25.97■■□□□ 1.75
CD40-202ENST00000372285 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.94■■□□□ 1.74
CD40-202ENST00000372285 ABCA6Q8N139 1617 aa25.94■■□□□ 1.74
CD40-202ENST00000372285 A2MP01023 1474 aa25.93■■□□□ 1.74
CD40-202ENST00000372285 FRMPD1Q5SYB0 1578 aa25.92■■□□□ 1.74
CD40-202ENST00000372285 VWDEQ8N2E2 1590 aa25.92■■□□□ 1.74
CD40-202ENST00000372285 BCORL1Q5H9F3 1711 aa25.91■■□□□ 1.74
CD40-202ENST00000372285 RAPGEF3O95398 923 aa25.91■■□□□ 1.74
CD40-202ENST00000372285 MROH1Q8NDA8 1641 aa25.9■■□□□ 1.74
CD40-202ENST00000372285 PRDM15P57071 1507 aaPredicted RBP25.9■■□□□ 1.74
CD40-202ENST00000372285 RNF17Q9BXT8 1623 aaKnown RBP25.89■■□□□ 1.73
CD40-202ENST00000372285 ZMYM4Q5VZL5 1548 aa25.88■■□□□ 1.73
CD40-202ENST00000372285 DIP2CQ9Y2E4 1556 aa25.88■■□□□ 1.73
CD40-202ENST00000372285 L3MBTL2Q969R5 705 aa25.88■■□□□ 1.73
CD40-202ENST00000372285 TET3O43151 1660 aa25.87■■□□□ 1.73
CD40-202ENST00000372285 KIF3BO15066 747 aa25.86■■□□□ 1.73
CD40-202ENST00000372285 E9PCH4 1651 aa25.85■■□□□ 1.73
CD40-202ENST00000372285 KANK1Q14678 1352 aa25.85■■□□□ 1.73
CD40-202ENST00000372285 ATP10AO60312 1499 aa25.85■■□□□ 1.73
CD40-202ENST00000372285 PLA2R1Q13018 1463 aa25.83■■□□□ 1.73
CD40-202ENST00000372285 LMTK2Q8IWU2 1503 aa25.78■■□□□ 1.72
CD40-202ENST00000372285 CCDC144AA2RUR9 1427 aa25.77■■□□□ 1.72
CD40-202ENST00000372285 DIEXFQ68CQ4 756 aaKnown RBP25.77■■□□□ 1.72
CD40-202ENST00000372285 YEATS2Q9ULM3 1422 aa25.77■■□□□ 1.72
CD40-202ENST00000372285 SPHKAPQ2M3C7 1700 aa25.76■■□□□ 1.71
CD40-202ENST00000372285 CEP152O94986 1710 aa25.74■■□□□ 1.71
CD40-202ENST00000372285 EFCAB6Q5THR3 1501 aa25.73■■□□□ 1.71
CD40-202ENST00000372285 PTPRTO14522 1441 aa25.73■■□□□ 1.71
CD40-202ENST00000372285 TRPM2O94759 1503 aa25.72■■□□□ 1.71
CD40-202ENST00000372285 REREQ9P2R6 1566 aa25.7■■□□□ 1.7
CD40-202ENST00000372285 NBPF8Q3BBV2 869 aa25.68■■□□□ 1.7
CD40-202ENST00000372285 COL17A1Q9UMD9 1497 aaPredicted RBP25.68■■□□□ 1.7
CD40-202ENST00000372285 UHRF1BP1Q6BDS2 1440 aa25.67■■□□□ 1.7
CD40-202ENST00000372285 ABCC3O15438 1527 aa25.65■■□□□ 1.7
CD40-202ENST00000372285 ZC3H13Q5T200 1668 aaKnown RBP25.64■■□□□ 1.69
CD40-202ENST00000372285 GGT6Q6P531 493 aa25.63■■□□□ 1.69
CD40-202ENST00000372285 CLTCL1P53675 1640 aa25.63■■□□□ 1.69
CD40-202ENST00000372285 AGLP35573 1532 aa25.61■■□□□ 1.69
CD40-202ENST00000372285 CAMSAP1Q5T5Y3 1602 aa25.61■■□□□ 1.69
CD40-202ENST00000372285 ARHGEF40Q8TER5 1519 aa25.61■■□□□ 1.69
CD40-202ENST00000372285 SPATA31E1Q6ZUB1 1445 aa25.59■■□□□ 1.69
CD40-202ENST00000372285 NEURL4Q96JN8 1562 aa25.57■■□□□ 1.68
CD40-202ENST00000372285 WASHC2CQ9Y4E1 1318 aa25.57■■□□□ 1.68
CD40-202ENST00000372285 DCAF11Q8TEB1 546 aa25.57■■□□□ 1.68
CD40-202ENST00000372285 RALGAPBQ86X10 1494 aa25.56■■□□□ 1.68
CD40-202ENST00000372285 NPATQ14207 1427 aa25.55■■□□□ 1.68
CD40-202ENST00000372285 KIF1BO60333 1816 aa25.53■■□□□ 1.68
CD40-202ENST00000372285 CFAP65Q6ZU64 1925 aaKnown RBP25.53■■□□□ 1.68
CD40-202ENST00000372285 EIF4G2P78344 907 aaKnown RBP eCLIP25.53■■□□□ 1.68
CD40-202ENST00000372285 ARHGAP31Q2M1Z3 1444 aa25.53■■□□□ 1.68
CD40-202ENST00000372285 SIGLEC1Q9BZZ2 1709 aa25.52■■□□□ 1.68
CD40-202ENST00000372285 HSPA5P11021 654 aaKnown RBP25.51■■□□□ 1.68
CD40-202ENST00000372285 RGL3Q3MIN7 710 aa25.51■■□□□ 1.68
CD40-202ENST00000372285 PRAG1Q86YV5 1406 aa25.51■■□□□ 1.67
CD40-202ENST00000372285 HIRIP3Q9BW71 556 aaPredicted RBP25.51■■□□□ 1.67
CD40-202ENST00000372285 KDM2AQ9Y2K7 1162 aa25.51■■□□□ 1.67
CD40-202ENST00000372285 CNTLNQ9NXG0 1405 aa25.5■■□□□ 1.67
CD40-202ENST00000372285 ZNF326Q5BKZ1 582 aaKnown RBP25.5■■□□□ 1.67
CD40-202ENST00000372285 TRPM1Q7Z4N2 1603 aa25.49■■□□□ 1.67
CD40-202ENST00000372285 UGGT1Q9NYU2 1555 aa25.48■■□□□ 1.67
CD40-202ENST00000372285 PPP6R1Q9UPN7 881 aa25.47■■□□□ 1.67
CD40-202ENST00000372285 NOS1P29475 1434 aa25.47■■□□□ 1.67
CD40-202ENST00000372285 STAC3Q96MF2 364 aa25.45■■□□□ 1.66
CD40-202ENST00000372285 PIK3C2BO00750 1634 aa25.43■■□□□ 1.66
CD40-202ENST00000372285 TRHP20396 242 aaPredicted RBP25.43■■□□□ 1.66
CD40-202ENST00000372285 MROH2AA6NES4 1674 aa25.42■■□□□ 1.66
CD40-202ENST00000372285 SYNMO15061 1565 aa25.42■■□□□ 1.66
CD40-202ENST00000372285 IFT172Q9UG01 1749 aa25.41■■□□□ 1.66
CD40-202ENST00000372285 LAMC1P11047 1609 aa25.41■■□□□ 1.66
CD40-202ENST00000372285 MADDQ8WXG6 1647 aa25.41■■□□□ 1.66
CD40-202ENST00000372285 ADGRB3O60242 1522 aa25.41■■□□□ 1.66
CD40-202ENST00000372285 POLR1AO95602 1720 aaPredicted RBP25.41■■□□□ 1.66
CD40-202ENST00000372285 PREX1Q8TCU6 1659 aa25.41■■□□□ 1.66
CD40-202ENST00000372285 CLTCQ00610 1675 aaKnown RBP25.39■■□□□ 1.66
CD40-202ENST00000372285 USP47Q96K76 1375 aa25.39■■□□□ 1.65
CD40-202ENST00000372285 GPRASP1Q5JY77 1395 aa25.37■■□□□ 1.65
CD40-202ENST00000372285 CARD11Q9BXL7 1154 aa25.36■■□□□ 1.65
CD40-202ENST00000372285 MIER1Q8N108 512 aa25.35■■□□□ 1.65
CD40-202ENST00000372285 ROCK2O75116 1388 aaKnown RBP25.35■■□□□ 1.65
CD40-202ENST00000372285 MYOM2P54296 1465 aa25.35■■□□□ 1.65
CD40-202ENST00000372285 DDX10Q13206 875 aaKnown RBP25.34■■□□□ 1.65
CD40-202ENST00000372285 KIAA1210Q9ULL0 1709 aa25.33■■□□□ 1.65
CD40-202ENST00000372285 PPLO60437 1756 aa25.32■■□□□ 1.64
CD40-202ENST00000372285 WASHC2AQ641Q2 1341 aa25.31■■□□□ 1.64
CD40-202ENST00000372285 ERVK-7P63135 1459 aa25.29■■□□□ 1.64
CD40-202ENST00000372285 NBPF1Q3BBV0 1214 aa25.29■■□□□ 1.64
CD40-202ENST00000372285 SLC52A1Q9NWF4 448 aa25.29■■□□□ 1.64
CD40-202ENST00000372285 CCDC7Q96M83 1385 aa25.28■■□□□ 1.64
CD40-202ENST00000372285 NRXN1Q9ULB1 1477 aa25.27■■□□□ 1.64
CD40-202ENST00000372285 RPGRIP1LQ68CZ1 1315 aa25.26■■□□□ 1.63
CD40-202ENST00000372285 C11orf95C9JLR9 678 aaPredicted RBP25.26■■□□□ 1.63
CD40-202ENST00000372285 MLECQ14165 292 aa25.26■■□□□ 1.63
CD40-202ENST00000372285 SPATA31D1Q6ZQQ2 1576 aa25.26■■□□□ 1.63
CD40-202ENST00000372285 CHGAP10645 457 aaKnown RBP25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms