RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 IQGAP3Q86VI3 1631 aa24.84■■□□□ 1.57
CD40-201ENST00000372276 HNRNPUQ00839 825 aaKnown RBP eCLIP24.83■■□□□ 1.57
CD40-201ENST00000372276 FKBP8Q14318 412 aa24.83■■□□□ 1.56
CD40-201ENST00000372276 CCDC144AA2RUR9 1427 aa24.82■■□□□ 1.56
CD40-201ENST00000372276 ATP10AO60312 1499 aa24.81■■□□□ 1.56
CD40-201ENST00000372276 NPM1P06748 294 aaKnown RBP eCLIP24.8■■□□□ 1.56
CD40-201ENST00000372276 CARD11Q9BXL7 1154 aa24.8■■□□□ 1.56
CD40-201ENST00000372276 MAGI2Q86UL8 1455 aa24.8■■□□□ 1.56
CD40-201ENST00000372276 ERICH6BQ5W0A0 696 aa24.79■■□□□ 1.56
CD40-201ENST00000372276 KTN1Q86UP2 1357 aaKnown RBP24.79■■□□□ 1.56
CD40-201ENST00000372276 RTEL1-TNFRSF6BF6WH68 1400 aa24.77■■□□□ 1.56
CD40-201ENST00000372276 ZNF326Q5BKZ1 582 aaKnown RBP24.77■■□□□ 1.56
CD40-201ENST00000372276 MRS2Q9HD23 443 aa24.77■■□□□ 1.56
CD40-201ENST00000372276 ABCC1P33527 1531 aa24.76■■□□□ 1.55
CD40-201ENST00000372276 BCORL1Q5H9F3 1711 aa24.76■■□□□ 1.55
CD40-201ENST00000372276 DCAF11Q8TEB1 546 aa24.75■■□□□ 1.55
CD40-201ENST00000372276 LAMC1P11047 1609 aa24.74■■□□□ 1.55
CD40-201ENST00000372276 DHX29Q7Z478 1369 aaKnown RBP24.73■■□□□ 1.55
CD40-201ENST00000372276 ZBED9Q6R2W3 1325 aa24.72■■□□□ 1.55
CD40-201ENST00000372276 PRAG1Q86YV5 1406 aa24.71■■□□□ 1.55
CD40-201ENST00000372276 EIF2AK4Q9P2K8 1649 aaKnown RBP24.71■■□□□ 1.55
CD40-201ENST00000372276 STAC3Q96MF2 364 aa24.7■■□□□ 1.54
CD40-201ENST00000372276 GPRASP1Q5JY77 1395 aa24.69■■□□□ 1.54
CD40-201ENST00000372276 TRPM1Q7Z4N2 1603 aa24.69■■□□□ 1.54
CD40-201ENST00000372276 PLA2R1Q13018 1463 aa24.67■■□□□ 1.54
CD40-201ENST00000372276 KDM2AQ9Y2K7 1162 aa24.66■■□□□ 1.54
CD40-201ENST00000372276 TRHP20396 242 aaPredicted RBP24.64■■□□□ 1.54
CD40-201ENST00000372276 WDR7Q9Y4E6 1490 aa24.63■■□□□ 1.53
CD40-201ENST00000372276 MYT1Q01538 1121 aa24.63■■□□□ 1.53
CD40-201ENST00000372276 SPAG9O60271 1321 aaKnown RBP24.63■■□□□ 1.53
CD40-201ENST00000372276 ST20-MTHFSA0A0A6YYL1 179 aa24.62■■□□□ 1.53
CD40-201ENST00000372276 RALBP1Q15311 655 aa24.62■■□□□ 1.53
CD40-201ENST00000372276 FAM9BQ8IZU0 186 aa24.62■■□□□ 1.53
CD40-201ENST00000372276 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.62■■□□□ 1.53
CD40-201ENST00000372276 ASXL2Q76L83 1435 aa24.61■■□□□ 1.53
CD40-201ENST00000372276 A2MP01023 1474 aa24.61■■□□□ 1.53
CD40-201ENST00000372276 CCDC184Q52MB2 194 aa24.61■■□□□ 1.53
CD40-201ENST00000372276 TRAPPC8Q9Y2L5 1435 aa24.59■■□□□ 1.53
CD40-201ENST00000372276 ABCA9Q8IUA7 1624 aa24.58■■□□□ 1.53
CD40-201ENST00000372276 E9PCH4 1651 aa24.58■■□□□ 1.52
CD40-201ENST00000372276 WASHC2CQ9Y4E1 1318 aa24.58■■□□□ 1.52
CD40-201ENST00000372276 PRDM15P57071 1507 aaPredicted RBP24.57■■□□□ 1.52
CD40-201ENST00000372276 ZFYVE16Q7Z3T8 1539 aa24.57■■□□□ 1.52
CD40-201ENST00000372276 TSHZ2Q9NRE2 1034 aa24.57■■□□□ 1.52
CD40-201ENST00000372276 DEPDC5O75140 1603 aa24.55■■□□□ 1.52
CD40-201ENST00000372276 POLR3GLQ9BT43 218 aa24.55■■□□□ 1.52
CD40-201ENST00000372276 BRD4O60885 1362 aaPredicted RBP24.55■■□□□ 1.52
CD40-201ENST00000372276 BCANQ96GW7 911 aa24.54■■□□□ 1.52
CD40-201ENST00000372276 KANK1Q14678 1352 aa24.54■■□□□ 1.52
CD40-201ENST00000372276 DIP2BQ9P265 1576 aa24.52■■□□□ 1.52
CD40-201ENST00000372276 NEURL4Q96JN8 1562 aa24.52■■□□□ 1.52
CD40-201ENST00000372276 MYBBP1AQ9BQG0 1328 aaKnown RBP24.52■■□□□ 1.52
CD40-201ENST00000372276 TRPM2O94759 1503 aa24.51■■□□□ 1.51
CD40-201ENST00000372276 FANCAO15360 1455 aa24.51■■□□□ 1.51
CD40-201ENST00000372276 PTPRTO14522 1441 aa24.51■■□□□ 1.51
CD40-201ENST00000372276 INO80Q9ULG1 1556 aaPredicted RBP24.5■■□□□ 1.51
CD40-201ENST00000372276 FAM69CQ0P6D2 419 aa24.5■■□□□ 1.51
CD40-201ENST00000372276 TMC1Q8TDI8 760 aa24.5■■□□□ 1.51
CD40-201ENST00000372276 TET3O43151 1660 aa24.5■■□□□ 1.51
CD40-201ENST00000372276 KIF13AQ9H1H9 1805 aa24.5■■□□□ 1.51
CD40-201ENST00000372276 RGL3Q3MIN7 710 aa24.5■■□□□ 1.51
CD40-201ENST00000372276 ATP7AQ04656 1500 aa24.49■■□□□ 1.51
CD40-201ENST00000372276 SMG6Q86US8 1419 aaKnown RBP24.49■■□□□ 1.51
CD40-201ENST00000372276 COL17A1Q9UMD9 1497 aaPredicted RBP24.48■■□□□ 1.51
CD40-201ENST00000372276 RNF17Q9BXT8 1623 aaKnown RBP24.47■■□□□ 1.51
CD40-201ENST00000372276 PNISRQ8TF01 805 aaKnown RBP24.46■■□□□ 1.51
CD40-201ENST00000372276 VWDEQ8N2E2 1590 aa24.46■■□□□ 1.51
CD40-201ENST00000372276 CEP152O94986 1710 aa24.46■■□□□ 1.51
CD40-201ENST00000372276 SPHKAPQ2M3C7 1700 aa24.46■■□□□ 1.51
CD40-201ENST00000372276 GLI2P10070 1586 aa24.45■■□□□ 1.51
CD40-201ENST00000372276 SLC24A1O60721 1099 aa24.45■■□□□ 1.5
CD40-201ENST00000372276 TMF1P82094 1093 aa24.45■■□□□ 1.5
CD40-201ENST00000372276 PPP4R2Q9NY27 417 aa24.45■■□□□ 1.5
CD40-201ENST00000372276 AFAP1Q8N556 730 aa24.43■■□□□ 1.5
CD40-201ENST00000372276 INSRP06213 1382 aa24.43■■□□□ 1.5
CD40-201ENST00000372276 ADGRL1O94910 1474 aa24.43■■□□□ 1.5
CD40-201ENST00000372276 LRPPRCP42704 1394 aaKnown RBP24.42■■□□□ 1.5
CD40-201ENST00000372276 NBPF1Q3BBV0 1214 aa24.42■■□□□ 1.5
CD40-201ENST00000372276 SCAPERQ9BY12 1400 aa24.42■■□□□ 1.5
CD40-201ENST00000372276 CDCA8Q53HL2 280 aa24.41■■□□□ 1.5
CD40-201ENST00000372276 NLRP13Q86W25 1043 aa24.41■■□□□ 1.5
CD40-201ENST00000372276 CFAP74Q9C0B2 1584 aa24.4■■□□□ 1.5
CD40-201ENST00000372276 PARD3Q8TEW0 1356 aa24.4■■□□□ 1.5
CD40-201ENST00000372276 TESK2Q96S53 571 aa24.4■■□□□ 1.5
CD40-201ENST00000372276 ZMYM4Q5VZL5 1548 aa24.4■■□□□ 1.5
CD40-201ENST00000372276 NUDCQ9Y266 331 aa24.39■■□□□ 1.49
CD40-201ENST00000372276 MADDQ8WXG6 1647 aa24.38■■□□□ 1.49
CD40-201ENST00000372276 KIAA1210Q9ULL0 1709 aa24.38■■□□□ 1.49
CD40-201ENST00000372276 PER1O15534 1290 aaPredicted RBP24.35■■□□□ 1.49
CD40-201ENST00000372276 ZNF518AQ6AHZ1 1483 aa24.34■■□□□ 1.49
CD40-201ENST00000372276 IQGAP1P46940 1657 aa24.34■■□□□ 1.49
CD40-201ENST00000372276 EIF3AQ14152 1382 aaKnown RBP24.33■■□□□ 1.49
CD40-201ENST00000372276 MAP3K4Q9Y6R4 1608 aa24.33■■□□□ 1.49
CD40-201ENST00000372276 LMTK2Q8IWU2 1503 aa24.32■■□□□ 1.48
CD40-201ENST00000372276 CLTCL1P53675 1640 aa24.32■■□□□ 1.48
CD40-201ENST00000372276 SCAF11Q99590 1463 aaKnown RBP24.32■■□□□ 1.48
CD40-201ENST00000372276 RNF123Q5XPI4 1314 aa24.31■■□□□ 1.48
CD40-201ENST00000372276 PDE3BQ13370 1112 aa24.31■■□□□ 1.48
CD40-201ENST00000372276 KIF3BO15066 747 aa24.3■■□□□ 1.48
CD40-201ENST00000372276 DISP3Q9P2K9 1392 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms