RNA–Protein interactions for RNA: ENST00000371781.3

LCN1-202, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-202ENST00000371781 ADAMTSL3P82987 1691 aa16.15■□□□□ 0.18
LCN1-202ENST00000371781 IQGAP3Q86VI3 1631 aa16.15■□□□□ 0.18
LCN1-202ENST00000371781 ARHGEF40Q8TER5 1519 aa16.14■□□□□ 0.18
LCN1-202ENST00000371781 RNF17Q9BXT8 1623 aaKnown RBP16.14■□□□□ 0.17
LCN1-202ENST00000371781 A2MP01023 1474 aa16.14■□□□□ 0.17
LCN1-202ENST00000371781 VWDEQ8N2E2 1590 aa16.13■□□□□ 0.17
LCN1-202ENST00000371781 PRDM15P57071 1507 aaPredicted RBP16.12■□□□□ 0.17
LCN1-202ENST00000371781 DHX29Q7Z478 1369 aaKnown RBP16.12■□□□□ 0.17
LCN1-202ENST00000371781 FAM135AQ9P2D6 1515 aa16.11■□□□□ 0.17
LCN1-202ENST00000371781 REREQ9P2R6 1566 aa16.1■□□□□ 0.17
LCN1-202ENST00000371781 PTPRMP28827 1452 aa16.08■□□□□ 0.16
LCN1-202ENST00000371781 MADDQ8WXG6 1647 aa16.08■□□□□ 0.16
LCN1-202ENST00000371781 TRIM52Q96A61 297 aa16.07■□□□□ 0.16
LCN1-202ENST00000371781 MPHOSPH9Q99550 1183 aa16.07■□□□□ 0.16
LCN1-202ENST00000371781 CLSPNQ9HAW4 1339 aa16.07■□□□□ 0.16
LCN1-202ENST00000371781 NUP155O75694 1391 aa16.06■□□□□ 0.16
LCN1-202ENST00000371781 CEP152O94986 1710 aa16.05■□□□□ 0.16
LCN1-202ENST00000371781 FOXD1Q16676 465 aa16.04■□□□□ 0.16
LCN1-202ENST00000371781 E9PCH4 1651 aa16.03■□□□□ 0.16
LCN1-202ENST00000371781 TET3O43151 1660 aa16.03■□□□□ 0.16
LCN1-202ENST00000371781 RIMS1Q86UR5 1692 aaKnown RBP16.03■□□□□ 0.16
LCN1-202ENST00000371781 ATP10AO60312 1499 aa16.03■□□□□ 0.16
LCN1-202ENST00000371781 ANKRD30BQ9BXX2 1392 aa16.02■□□□□ 0.16
LCN1-202ENST00000371781 AGLP35573 1532 aa16.02■□□□□ 0.15
LCN1-202ENST00000371781 LMTK2Q8IWU2 1503 aa16.02■□□□□ 0.15
LCN1-202ENST00000371781 MYT1LQ9UL68 1186 aa16.01■□□□□ 0.15
LCN1-202ENST00000371781 ABCC3O15438 1527 aa16■□□□□ 0.15
LCN1-202ENST00000371781 EFCAB6Q5THR3 1501 aa16■□□□□ 0.15
LCN1-202ENST00000371781 PLA2R1Q13018 1463 aa16■□□□□ 0.15
LCN1-202ENST00000371781 SIN3AQ96ST3 1273 aa16■□□□□ 0.15
LCN1-202ENST00000371781 SLC4A1APQ9BWU0 796 aaKnown RBP16■□□□□ 0.15
LCN1-202ENST00000371781 KIF3BO15066 747 aa15.99■□□□□ 0.15
LCN1-202ENST00000371781 ACIN1Q9UKV3 1341 aaKnown RBP15.98■□□□□ 0.15
LCN1-202ENST00000371781 LMTK3Q96Q04 1460 aa15.98■□□□□ 0.15
LCN1-202ENST00000371781 PKD2Q13563 968 aa15.97■□□□□ 0.15
LCN1-202ENST00000371781 FBXO41Q8TF61 875 aa15.97■□□□□ 0.15
LCN1-202ENST00000371781 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.97■□□□□ 0.15
LCN1-202ENST00000371781 CAMSAP1Q5T5Y3 1602 aa15.97■□□□□ 0.15
LCN1-202ENST00000371781 ARID4BQ4LE39 1312 aaPredicted RBP15.96■□□□□ 0.15
LCN1-202ENST00000371781 ZEB1P37275 1124 aaPredicted RBP15.96■□□□□ 0.15
LCN1-202ENST00000371781 RPRD2Q5VT52 1461 aaKnown RBP15.96■□□□□ 0.14
LCN1-202ENST00000371781 ZC3H13Q5T200 1668 aaKnown RBP15.95■□□□□ 0.14
LCN1-202ENST00000371781 SPHKAPQ2M3C7 1700 aa15.95■□□□□ 0.14
LCN1-202ENST00000371781 FER1L4A9Z1Z3 1794 aa15.92■□□□□ 0.14
LCN1-202ENST00000371781 TRPM2O94759 1503 aa15.92■□□□□ 0.14
LCN1-202ENST00000371781 CLTCL1P53675 1640 aa15.91■□□□□ 0.14
LCN1-202ENST00000371781 PTPRTO14522 1441 aa15.91■□□□□ 0.14
LCN1-202ENST00000371781 NPATQ14207 1427 aa15.9■□□□□ 0.14
LCN1-202ENST00000371781 CLTCQ00610 1675 aaKnown RBP15.89■□□□□ 0.13
LCN1-202ENST00000371781 UGGT1Q9NYU2 1555 aa15.89■□□□□ 0.13
LCN1-202ENST00000371781 KANK1Q14678 1352 aa15.88■□□□□ 0.13
LCN1-202ENST00000371781 NEUROD1Q13562 356 aa15.88■□□□□ 0.13
LCN1-202ENST00000371781 GGT6Q6P531 493 aa15.87■□□□□ 0.13
LCN1-202ENST00000371781 PLPPR3Q6T4P5 718 aa15.87■□□□□ 0.13
LCN1-202ENST00000371781 SYNMO15061 1565 aa15.87■□□□□ 0.13
LCN1-202ENST00000371781 HSPA2P54652 639 aa15.85■□□□□ 0.13
LCN1-202ENST00000371781 PREX1Q8TCU6 1659 aa15.85■□□□□ 0.13
LCN1-202ENST00000371781 ARHGAP31Q2M1Z3 1444 aa15.85■□□□□ 0.13
LCN1-202ENST00000371781 PIK3C2BO00750 1634 aa15.84■□□□□ 0.13
LCN1-202ENST00000371781 MROH2AA6NES4 1674 aa15.84■□□□□ 0.13
LCN1-202ENST00000371781 NOS1P29475 1434 aa15.84■□□□□ 0.13
LCN1-202ENST00000371781 CCDC144AA2RUR9 1427 aa15.81■□□□□ 0.12
LCN1-202ENST00000371781 MLECQ14165 292 aa15.81■□□□□ 0.12
LCN1-202ENST00000371781 SPATA31E1Q6ZUB1 1445 aa15.81■□□□□ 0.12
LCN1-202ENST00000371781 TONSLQ96HA7 1378 aa15.81■□□□□ 0.12
LCN1-202ENST00000371781 CFAP65Q6ZU64 1925 aaKnown RBP15.8■□□□□ 0.12
LCN1-202ENST00000371781 ERVK-7P63135 1459 aa15.79■□□□□ 0.12
LCN1-202ENST00000371781 WASHC2CQ9Y4E1 1318 aa15.79■□□□□ 0.12
LCN1-202ENST00000371781 SPATA31D1Q6ZQQ2 1576 aa15.79■□□□□ 0.12
LCN1-202ENST00000371781 ADGRB3O60242 1522 aa15.78■□□□□ 0.12
LCN1-202ENST00000371781 CNTLNQ9NXG0 1405 aa15.78■□□□□ 0.12
LCN1-202ENST00000371781 NEURL4Q96JN8 1562 aa15.78■□□□□ 0.12
LCN1-202ENST00000371781 L3MBTL2Q969R5 705 aa15.77■□□□□ 0.12
LCN1-202ENST00000371781 TIMELESSQ9UNS1 1208 aa15.77■□□□□ 0.12
LCN1-202ENST00000371781 IFT172Q9UG01 1749 aa15.77■□□□□ 0.11
LCN1-202ENST00000371781 PPP1R15AO75807 674 aaPredicted RBP15.75■□□□□ 0.11
LCN1-202ENST00000371781 STRCQ7RTU9 1775 aa15.75■□□□□ 0.11
LCN1-202ENST00000371781 C3P01024 1663 aa15.74■□□□□ 0.11
LCN1-202ENST00000371781 KIF1BO60333 1816 aa15.73■□□□□ 0.11
LCN1-202ENST00000371781 MYO5BQ9ULV0 1848 aa15.73■□□□□ 0.11
LCN1-202ENST00000371781 NBPF8Q3BBV2 869 aa15.72■□□□□ 0.11
LCN1-202ENST00000371781 PPP6R1Q9UPN7 881 aa15.72■□□□□ 0.11
LCN1-202ENST00000371781 UHRF1BP1Q6BDS2 1440 aa15.71■□□□□ 0.11
LCN1-202ENST00000371781 FBXO31Q5XUX0 539 aaPredicted RBP15.71■□□□□ 0.11
LCN1-202ENST00000371781 CERKQ8TCT0 537 aa15.71■□□□□ 0.11
LCN1-202ENST00000371781 TMEM131LA2VDJ0 1609 aa15.7■□□□□ 0.1
LCN1-202ENST00000371781 CEBPAP49715 358 aaPredicted RBP15.7■□□□□ 0.1
LCN1-202ENST00000371781 PPLO60437 1756 aa15.69■□□□□ 0.1
LCN1-202ENST00000371781 SETD1BQ9UPS6 1966 aaKnown RBP15.69■□□□□ 0.1
LCN1-202ENST00000371781 TRPM1Q7Z4N2 1603 aa15.68■□□□□ 0.1
LCN1-202ENST00000371781 ZMYM3Q14202 1370 aa15.68■□□□□ 0.1
LCN1-202ENST00000371781 PRAG1Q86YV5 1406 aa15.68■□□□□ 0.1
LCN1-202ENST00000371781 NEXMIFQ5QGS0 1516 aa15.67■□□□□ 0.1
LCN1-202ENST00000371781 RALGAPBQ86X10 1494 aa15.66■□□□□ 0.1
LCN1-202ENST00000371781 MYOM2P54296 1465 aa15.65■□□□□ 0.1
LCN1-202ENST00000371781 NRXN1Q9ULB1 1477 aa15.64■□□□□ 0.09
LCN1-202ENST00000371781 IDI1Q13907 227 aa15.63■□□□□ 0.09
LCN1-202ENST00000371781 RGL3Q3MIN7 710 aa15.63■□□□□ 0.09
LCN1-202ENST00000371781 MYO3AQ8NEV4 1616 aa15.61■□□□□ 0.09
LCN1-202ENST00000371781 A2ML1A8K2U0 1454 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms