RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 DHX29Q7Z478 1369 aaKnown RBP25.15■■□□□ 1.62
SSBP3-203ENST00000371319 PPRC1Q5VV67 1664 aaKnown RBP25.15■■□□□ 1.62
SSBP3-203ENST00000371319 L3MBTL2Q969R5 705 aa25.15■■□□□ 1.62
SSBP3-203ENST00000371319 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.15■■□□□ 1.62
SSBP3-203ENST00000371319 RICTORQ6R327 1708 aa25.14■■□□□ 1.62
SSBP3-203ENST00000371319 FAM69CQ0P6D2 419 aa25.14■■□□□ 1.61
SSBP3-203ENST00000371319 VWDEQ8N2E2 1590 aa25.11■■□□□ 1.61
SSBP3-203ENST00000371319 MYT1LQ9UL68 1186 aa25.11■■□□□ 1.61
SSBP3-203ENST00000371319 ABCA6Q8N139 1617 aa25.11■■□□□ 1.61
SSBP3-203ENST00000371319 MROH1Q8NDA8 1641 aa25.1■■□□□ 1.61
SSBP3-203ENST00000371319 KIF13AQ9H1H9 1805 aa25.09■■□□□ 1.61
SSBP3-203ENST00000371319 A2MP01023 1474 aa25.09■■□□□ 1.61
SSBP3-203ENST00000371319 FRMPD1Q5SYB0 1578 aa25.09■■□□□ 1.61
SSBP3-203ENST00000371319 TSPOAP1O95153 1857 aa25.09■■□□□ 1.61
SSBP3-203ENST00000371319 PLA2R1Q13018 1463 aa25.08■■□□□ 1.61
SSBP3-203ENST00000371319 PRDM15P57071 1507 aaPredicted RBP25.08■■□□□ 1.6
SSBP3-203ENST00000371319 E9PCH4 1651 aa25.06■■□□□ 1.6
SSBP3-203ENST00000371319 RNF17Q9BXT8 1623 aaKnown RBP25.06■■□□□ 1.6
SSBP3-203ENST00000371319 TET3O43151 1660 aa25.05■■□□□ 1.6
SSBP3-203ENST00000371319 RAPGEF3O95398 923 aa25.05■■□□□ 1.6
SSBP3-203ENST00000371319 BCORL1Q5H9F3 1711 aa25.05■■□□□ 1.6
SSBP3-203ENST00000371319 ATP10AO60312 1499 aa25.04■■□□□ 1.6
SSBP3-203ENST00000371319 DIP2CQ9Y2E4 1556 aa25.03■■□□□ 1.6
SSBP3-203ENST00000371319 KIF3BO15066 747 aa25.03■■□□□ 1.6
SSBP3-203ENST00000371319 NBPF8Q3BBV2 869 aa25■■□□□ 1.59
SSBP3-203ENST00000371319 KANK1Q14678 1352 aa25■■□□□ 1.59
SSBP3-203ENST00000371319 ZMYM4Q5VZL5 1548 aa24.99■■□□□ 1.59
SSBP3-203ENST00000371319 CCDC144AA2RUR9 1427 aa24.98■■□□□ 1.59
SSBP3-203ENST00000371319 SPHKAPQ2M3C7 1700 aa24.96■■□□□ 1.59
SSBP3-203ENST00000371319 LMTK2Q8IWU2 1503 aa24.95■■□□□ 1.59
SSBP3-203ENST00000371319 CEP152O94986 1710 aa24.94■■□□□ 1.58
SSBP3-203ENST00000371319 TRPM2O94759 1503 aa24.93■■□□□ 1.58
SSBP3-203ENST00000371319 PTPRTO14522 1441 aa24.93■■□□□ 1.58
SSBP3-203ENST00000371319 UHRF1BP1Q6BDS2 1440 aa24.93■■□□□ 1.58
SSBP3-203ENST00000371319 YEATS2Q9ULM3 1422 aa24.92■■□□□ 1.58
SSBP3-203ENST00000371319 EFCAB6Q5THR3 1501 aa24.91■■□□□ 1.58
SSBP3-203ENST00000371319 HIRIP3Q9BW71 556 aaPredicted RBP24.89■■□□□ 1.58
SSBP3-203ENST00000371319 CLTCL1P53675 1640 aa24.86■■□□□ 1.57
SSBP3-203ENST00000371319 HSPA5P11021 654 aaKnown RBP24.84■■□□□ 1.57
SSBP3-203ENST00000371319 RALGAPBQ86X10 1494 aa24.83■■□□□ 1.57
SSBP3-203ENST00000371319 ABCC3O15438 1527 aa24.83■■□□□ 1.57
SSBP3-203ENST00000371319 SPATA31E1Q6ZUB1 1445 aa24.82■■□□□ 1.56
SSBP3-203ENST00000371319 EIF4G2P78344 907 aaKnown RBP eCLIP24.82■■□□□ 1.568e-7■■■■□ 25.5
SSBP3-203ENST00000371319 DCAF11Q8TEB1 546 aa24.81■■□□□ 1.56
SSBP3-203ENST00000371319 REREQ9P2R6 1566 aa24.81■■□□□ 1.56
SSBP3-203ENST00000371319 COL17A1Q9UMD9 1497 aaPredicted RBP24.81■■□□□ 1.56
SSBP3-203ENST00000371319 MIER1Q8N108 512 aa24.8■■□□□ 1.56
SSBP3-203ENST00000371319 CAMSAP1Q5T5Y3 1602 aa24.8■■□□□ 1.56
SSBP3-203ENST00000371319 GGT6Q6P531 493 aa24.8■■□□□ 1.56
SSBP3-203ENST00000371319 ZNF326Q5BKZ1 582 aaKnown RBP24.78■■□□□ 1.56
SSBP3-203ENST00000371319 KDM2AQ9Y2K7 1162 aa24.78■■□□□ 1.56
SSBP3-203ENST00000371319 ZC3H13Q5T200 1668 aaKnown RBP24.78■■□□□ 1.56
SSBP3-203ENST00000371319 PRAG1Q86YV5 1406 aa24.77■■□□□ 1.56
SSBP3-203ENST00000371319 TRPM1Q7Z4N2 1603 aa24.77■■□□□ 1.56
SSBP3-203ENST00000371319 NEURL4Q96JN8 1562 aa24.76■■□□□ 1.56
SSBP3-203ENST00000371319 RGL3Q3MIN7 710 aa24.76■■□□□ 1.55
SSBP3-203ENST00000371319 NPATQ14207 1427 aa24.75■■□□□ 1.55
SSBP3-203ENST00000371319 UGGT1Q9NYU2 1555 aa24.74■■□□□ 1.55
SSBP3-203ENST00000371319 AGLP35573 1532 aa24.73■■□□□ 1.55
SSBP3-203ENST00000371319 ARHGEF40Q8TER5 1519 aa24.73■■□□□ 1.55
SSBP3-203ENST00000371319 SIGLEC1Q9BZZ2 1709 aa24.72■■□□□ 1.55
SSBP3-203ENST00000371319 WASHC2CQ9Y4E1 1318 aa24.72■■□□□ 1.55
SSBP3-203ENST00000371319 DDX10Q13206 875 aaKnown RBP24.71■■□□□ 1.55
SSBP3-203ENST00000371319 KIF1BO60333 1816 aa24.71■■□□□ 1.55
SSBP3-203ENST00000371319 POLR1AO95602 1720 aaPredicted RBP24.69■■□□□ 1.54
SSBP3-203ENST00000371319 USP47Q96K76 1375 aa24.68■■□□□ 1.54
SSBP3-203ENST00000371319 MROH2AA6NES4 1674 aa24.68■■□□□ 1.54
SSBP3-203ENST00000371319 ARHGAP31Q2M1Z3 1444 aa24.68■■□□□ 1.54
SSBP3-203ENST00000371319 CNTLNQ9NXG0 1405 aa24.67■■□□□ 1.54
SSBP3-203ENST00000371319 MADDQ8WXG6 1647 aa24.67■■□□□ 1.54
SSBP3-203ENST00000371319 CFAP65Q6ZU64 1925 aaKnown RBP24.67■■□□□ 1.54
SSBP3-203ENST00000371319 LAMC1P11047 1609 aa24.66■■□□□ 1.54
SSBP3-203ENST00000371319 NOS1P29475 1434 aa24.66■■□□□ 1.54
SSBP3-203ENST00000371319 WASHC2AQ641Q2 1341 aa24.65■■□□□ 1.54
SSBP3-203ENST00000371319 IFT172Q9UG01 1749 aa24.64■■□□□ 1.53
SSBP3-203ENST00000371319 ADGRB3O60242 1522 aa24.64■■□□□ 1.53
SSBP3-203ENST00000371319 GPRASP1Q5JY77 1395 aa24.63■■□□□ 1.53
SSBP3-203ENST00000371319 SYNMO15061 1565 aa24.63■■□□□ 1.53
SSBP3-203ENST00000371319 C11orf95C9JLR9 678 aaPredicted RBP24.63■■□□□ 1.53
SSBP3-203ENST00000371319 CARD11Q9BXL7 1154 aa24.63■■□□□ 1.53
SSBP3-203ENST00000371319 ROCK2O75116 1388 aaKnown RBP24.62■■□□□ 1.53
SSBP3-203ENST00000371319 PIK3C2BO00750 1634 aa24.62■■□□□ 1.53
SSBP3-203ENST00000371319 CCDC7Q96M83 1385 aa24.61■■□□□ 1.53
SSBP3-203ENST00000371319 STAC3Q96MF2 364 aa24.59■■□□□ 1.53
SSBP3-203ENST00000371319 PREX1Q8TCU6 1659 aa24.58■■□□□ 1.53
SSBP3-203ENST00000371319 MYOM2P54296 1465 aa24.58■■□□□ 1.52
SSBP3-203ENST00000371319 NBPF1Q3BBV0 1214 aa24.57■■□□□ 1.52
SSBP3-203ENST00000371319 CLTCQ00610 1675 aaKnown RBP24.56■■□□□ 1.52
SSBP3-203ENST00000371319 PPP6R1Q9UPN7 881 aa24.55■■□□□ 1.52
SSBP3-203ENST00000371319 KIAA1210Q9ULL0 1709 aa24.54■■□□□ 1.52
SSBP3-203ENST00000371319 KIF7Q2M1P5 1343 aa24.54■■□□□ 1.52
SSBP3-203ENST00000371319 PPLO60437 1756 aa24.53■■□□□ 1.52
SSBP3-203ENST00000371319 NRXN1Q9ULB1 1477 aa24.51■■□□□ 1.51
SSBP3-203ENST00000371319 DNAJC5Q9H3Z4 198 aa24.5■■□□□ 1.51
SSBP3-203ENST00000371319 IQGAP1P46940 1657 aa24.49■■□□□ 1.51
SSBP3-203ENST00000371319 ST20-MTHFSA0A0A6YYL1 179 aa24.49■■□□□ 1.51
SSBP3-203ENST00000371319 ERVK-7P63135 1459 aa24.48■■□□□ 1.51
SSBP3-203ENST00000371319 TRHP20396 242 aaPredicted RBP24.46■■□□□ 1.51
SSBP3-203ENST00000371319 ARID4BQ4LE39 1312 aaPredicted RBP24.45■■□□□ 1.5
SSBP3-203ENST00000371319 ADGRF5Q8IZF2 1346 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms