RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 PPP6R1Q9UPN7 881 aa9.87□□□□□ -0.83
USP1-202ENST00000371146 ZMYM3Q14202 1370 aa9.86□□□□□ -0.83
USP1-202ENST00000371146 MINK1Q8N4C8 1332 aaPredicted RBP9.86□□□□□ -0.83
USP1-202ENST00000371146 SRPK2P78362 688 aaKnown RBP9.86□□□□□ -0.83
USP1-202ENST00000371146 CAMSAP2Q08AD1 1489 aa9.84□□□□□ -0.83
USP1-202ENST00000371146 MAGI3Q5TCQ9 1506 aa9.84□□□□□ -0.83
USP1-202ENST00000371146 CFAP70Q5T0N1 1121 aa9.83□□□□□ -0.84
USP1-202ENST00000371146 UBE2Q2Q8WVN8 375 aa9.83□□□□□ -0.84
USP1-202ENST00000371146 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.83□□□□□ -0.841e-5■■■■□ 25.8
USP1-202ENST00000371146 PMFBP1Q8TBY8 1022 aa9.83□□□□□ -0.84
USP1-202ENST00000371146 CARD11Q9BXL7 1154 aa9.83□□□□□ -0.84
USP1-202ENST00000371146 ABCA8O94911 1581 aa9.83□□□□□ -0.84
USP1-202ENST00000371146 NCBP3Q53F19 620 aaKnown RBP9.82□□□□□ -0.84
USP1-202ENST00000371146 ATF3P18847 181 aa9.82□□□□□ -0.84
USP1-202ENST00000371146 USP35Q9P2H5 1018 aa9.82□□□□□ -0.84
USP1-202ENST00000371146 TIAM1Q13009 1591 aa9.82□□□□□ -0.84
USP1-202ENST00000371146 WAPLQ7Z5K2 1190 aa9.82□□□□□ -0.84
USP1-202ENST00000371146 ABCC5O15440 1437 aa9.82□□□□□ -0.84
USP1-202ENST00000371146 ZNF335Q9H4Z2 1342 aaPredicted RBP9.82□□□□□ -0.84
USP1-202ENST00000371146 ANP32EQ9BTT0 268 aa9.81□□□□□ -0.84
USP1-202ENST00000371146 L3MBTL2Q969R5 705 aa9.81□□□□□ -0.84
USP1-202ENST00000371146 ZNF518AQ6AHZ1 1483 aa9.81□□□□□ -0.84
USP1-202ENST00000371146 DHX29Q7Z478 1369 aaKnown RBP9.81□□□□□ -0.84
USP1-202ENST00000371146 SETD5Q9C0A6 1442 aa9.81□□□□□ -0.84
USP1-202ENST00000371146 MEX3CQ5U5Q3 659 aaKnown RBP9.81□□□□□ -0.84
USP1-202ENST00000371146 CCDC141Q6ZP82 1450 aa9.8□□□□□ -0.84
USP1-202ENST00000371146 DAPK1P53355 1430 aa9.8□□□□□ -0.84
USP1-202ENST00000371146 UHRF1BP1LA0JNW5 1464 aa9.8□□□□□ -0.84
USP1-202ENST00000371146 ADAMTS2O95450 1211 aa9.79□□□□□ -0.84
USP1-202ENST00000371146 ESCO1Q5FWF5 840 aa9.79□□□□□ -0.84
USP1-202ENST00000371146 NGDNQ8NEJ9 315 aaKnown RBP9.79□□□□□ -0.84
USP1-202ENST00000371146 DDX17Q92841 729 aaKnown RBP9.79□□□□□ -0.84
USP1-202ENST00000371146 TTC37Q6PGP7 1564 aa9.79□□□□□ -0.84
USP1-202ENST00000371146 A2MP01023 1474 aa9.79□□□□□ -0.84
USP1-202ENST00000371146 EHBP1L1Q8N3D4 1523 aa9.79□□□□□ -0.84
USP1-202ENST00000371146 MIA2Q96PC5 1412 aa9.78□□□□□ -0.84
USP1-202ENST00000371146 VGFO15240 615 aaPredicted RBP9.78□□□□□ -0.84
USP1-202ENST00000371146 LTKP29376 864 aa9.78□□□□□ -0.84
USP1-202ENST00000371146 PTPRKQ15262 1439 aa9.77□□□□□ -0.84
USP1-202ENST00000371146 TNRQ92752 1358 aa9.77□□□□□ -0.84
USP1-202ENST00000371146 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.77□□□□□ -0.85
USP1-202ENST00000371146 AMOTL2Q9Y2J4 779 aa9.77□□□□□ -0.85
USP1-202ENST00000371146 ATP10AO60312 1499 aa9.77□□□□□ -0.85
USP1-202ENST00000371146 FOXO3O43524 673 aa9.77□□□□□ -0.85
USP1-202ENST00000371146 ACIN1Q9UKV3 1341 aaKnown RBP9.76□□□□□ -0.85
USP1-202ENST00000371146 SAMD9Q5K651 1589 aa9.76□□□□□ -0.85
USP1-202ENST00000371146 ARHGEF12Q9NZN5 1544 aa9.76□□□□□ -0.85
USP1-202ENST00000371146 NBPF1Q3BBV0 1214 aa9.76□□□□□ -0.85
USP1-202ENST00000371146 LTV1Q96GA3 475 aaPredicted RBP9.76□□□□□ -0.85
USP1-202ENST00000371146 CCDC144AA2RUR9 1427 aa9.75□□□□□ -0.85
USP1-202ENST00000371146 DMRT2Q9Y5R5 561 aa9.75□□□□□ -0.85
USP1-202ENST00000371146 DIP2BQ9P265 1576 aa9.75□□□□□ -0.85
USP1-202ENST00000371146 LMTK3Q96Q04 1460 aa9.75□□□□□ -0.85
USP1-202ENST00000371146 NCOA1Q15788 1441 aa9.74□□□□□ -0.85
USP1-202ENST00000371146 SLC52A1Q9NWF4 448 aa9.74□□□□□ -0.85
USP1-202ENST00000371146 KCNA6P17658 529 aa9.74□□□□□ -0.85
USP1-202ENST00000371146 SUPT6HQ7KZ85 1726 aaKnown RBP9.74□□□□□ -0.85
USP1-202ENST00000371146 SHROOM2Q13796 1616 aa9.73□□□□□ -0.85
USP1-202ENST00000371146 PSME1Q06323 249 aa9.73□□□□□ -0.85
USP1-202ENST00000371146 PRAM1Q96QH2 718 aa9.73□□□□□ -0.85
USP1-202ENST00000371146 SALL2Q9Y467 1007 aaPredicted RBP9.73□□□□□ -0.85
USP1-202ENST00000371146 UHRF1BP1Q6BDS2 1440 aa9.73□□□□□ -0.85
USP1-202ENST00000371146 NEO1Q92859 1461 aa9.72□□□□□ -0.85
USP1-202ENST00000371146 ADGRF5Q8IZF2 1346 aa9.72□□□□□ -0.85
USP1-202ENST00000371146 YTHDC1Q96MU7 727 aaKnown RBP9.72□□□□□ -0.85
USP1-202ENST00000371146 CABP2Q9NPB3 220 aa9.72□□□□□ -0.85
USP1-202ENST00000371146 ZFYVE16Q7Z3T8 1539 aa9.71□□□□□ -0.85
USP1-202ENST00000371146 TOM1O60784 492 aa9.71□□□□□ -0.86
USP1-202ENST00000371146 DDX10Q13206 875 aaKnown RBP9.71□□□□□ -0.86
USP1-202ENST00000371146 MAPKBP1O60336 1514 aa9.7□□□□□ -0.86
USP1-202ENST00000371146 CSB-PGBD3P0DP91 1061 aa9.7□□□□□ -0.86
USP1-202ENST00000371146 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.7□□□□□ -0.86
USP1-202ENST00000371146 CABLES1Q8TDN4 633 aa9.69□□□□□ -0.86
USP1-202ENST00000371146 ARXQ96QS3 562 aa9.68□□□□□ -0.86
USP1-202ENST00000371146 STRN4Q9NRL3 753 aa9.68□□□□□ -0.86
USP1-202ENST00000371146 PTPN23Q9H3S7 1636 aa9.68□□□□□ -0.86
USP1-202ENST00000371146 ZC3H6P61129 1189 aaKnown RBP9.68□□□□□ -0.86
USP1-202ENST00000371146 ST20-MTHFSA0A0A6YYL1 179 aa9.67□□□□□ -0.86
USP1-202ENST00000371146 ERBINQ96RT1 1412 aa9.67□□□□□ -0.86
USP1-202ENST00000371146 ROCK2O75116 1388 aaKnown RBP9.66□□□□□ -0.86
USP1-202ENST00000371146 CC2D1BQ5T0F9 858 aaKnown RBP9.66□□□□□ -0.86
USP1-202ENST00000371146 NAIPQ13075 1403 aa9.66□□□□□ -0.86
USP1-202ENST00000371146 KIAA1107Q9UPP5 1409 aa9.66□□□□□ -0.86
USP1-202ENST00000371146 ATP7AQ04656 1500 aa9.66□□□□□ -0.86
USP1-202ENST00000371146 ORAI2Q96SN7 254 aa9.65□□□□□ -0.86
USP1-202ENST00000371146 ILDR1Q86SU0 546 aaPredicted RBP9.65□□□□□ -0.86
USP1-202ENST00000371146 NGLY1Q96IV0 654 aa9.65□□□□□ -0.86
USP1-202ENST00000371146 C8orf37Q96NL8 207 aa9.65□□□□□ -0.86
USP1-202ENST00000371146 PODXL2Q9NZ53 605 aa9.65□□□□□ -0.86
USP1-202ENST00000371146 MBD5Q9P267 1494 aa9.65□□□□□ -0.87
USP1-202ENST00000371146 PTPRMP28827 1452 aa9.64□□□□□ -0.87
USP1-202ENST00000371146 CERKQ8TCT0 537 aa9.64□□□□□ -0.87
USP1-202ENST00000371146 EVA1CP58658 441 aa9.64□□□□□ -0.87
USP1-202ENST00000371146 EIF4G2P78344 907 aaKnown RBP eCLIP9.64□□□□□ -0.87
USP1-202ENST00000371146 FAM135AQ9P2D6 1515 aa9.63□□□□□ -0.87
USP1-202ENST00000371146 SAMD9LQ8IVG5 1584 aa9.62□□□□□ -0.87
USP1-202ENST00000371146 KAT6BQ8WYB5 2073 aa9.62□□□□□ -0.87
USP1-202ENST00000371146 FBLN1P23142 703 aa9.62□□□□□ -0.87
USP1-202ENST00000371146 GTF3C3Q9Y5Q9 886 aa9.62□□□□□ -0.87
USP1-202ENST00000371146 MYO5CQ9NQX4 1742 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms