RNA–Protein interactions for RNA: ENST00000371118.1

ATG4C-202, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-202ENST00000371118 C3P01024 1663 aa10.48□□□□□ -0.73
ATG4C-202ENST00000371118 RANGAP1P46060 587 aaPredicted RBP10.48□□□□□ -0.73
ATG4C-202ENST00000371118 FBXO3Q9UK99 471 aa10.47□□□□□ -0.73
ATG4C-202ENST00000371118 PROM2Q8N271 834 aa10.46□□□□□ -0.73
ATG4C-202ENST00000371118 POTEB2H3BUK9 544 aa10.45□□□□□ -0.74
ATG4C-202ENST00000371118 PKD2Q13563 968 aa10.44□□□□□ -0.74
ATG4C-202ENST00000371118 AFAP1Q8N556 730 aa10.44□□□□□ -0.74
ATG4C-202ENST00000371118 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.43□□□□□ -0.74
ATG4C-202ENST00000371118 POTEAQ6S8J7 498 aa10.43□□□□□ -0.74
ATG4C-202ENST00000371118 RAPGEF6Q8TEU7 1601 aa10.43□□□□□ -0.74
ATG4C-202ENST00000371118 SSUH2Q9Y2M2 353 aa10.42□□□□□ -0.74
ATG4C-202ENST00000371118 EFCAB2Q5VUJ9 269 aa10.4□□□□□ -0.74
ATG4C-202ENST00000371118 NUP153P49790 1475 aaKnown RBP10.4□□□□□ -0.74
ATG4C-202ENST00000371118 SUPT6HQ7KZ85 1726 aaKnown RBP10.38□□□□□ -0.75
ATG4C-202ENST00000371118 PTPRKQ15262 1439 aa10.38□□□□□ -0.75
ATG4C-202ENST00000371118 SETD1AO15047 1707 aaKnown RBP10.36□□□□□ -0.75
ATG4C-202ENST00000371118 PLCH2O75038 1416 aa10.36□□□□□ -0.75
ATG4C-202ENST00000371118 ATP1B4Q9UN42 357 aaPredicted RBP10.36□□□□□ -0.75
ATG4C-202ENST00000371118 ZMYM3Q14202 1370 aa10.36□□□□□ -0.75
ATG4C-202ENST00000371118 SHANK2Q9UPX8 1470 aa10.36□□□□□ -0.75
ATG4C-202ENST00000371118 CPS1P31327 1500 aa10.35□□□□□ -0.75
ATG4C-202ENST00000371118 ZNF518AQ6AHZ1 1483 aa10.35□□□□□ -0.75
ATG4C-202ENST00000371118 CNTLNQ9NXG0 1405 aa10.34□□□□□ -0.75
ATG4C-202ENST00000371118 PLA2R1Q13018 1463 aa10.34□□□□□ -0.75
ATG4C-202ENST00000371118 TCOF1Q13428 1488 aaKnown RBP10.34□□□□□ -0.75
ATG4C-202ENST00000371118 DIP2CQ9Y2E4 1556 aa10.34□□□□□ -0.75
ATG4C-202ENST00000371118 NPATQ14207 1427 aa10.33□□□□□ -0.76
ATG4C-202ENST00000371118 PRR29P0C7W0 189 aa10.33□□□□□ -0.76
ATG4C-202ENST00000371118 UPF1Q92900 1129 aaKnown RBP eCLIP10.33□□□□□ -0.76
ATG4C-202ENST00000371118 CEP170BQ9Y4F5 1589 aaPredicted RBP10.31□□□□□ -0.76
ATG4C-202ENST00000371118 VASPP50552 380 aaPredicted RBP10.31□□□□□ -0.76
ATG4C-202ENST00000371118 LCE2DQ5TA82 110 aaPredicted RBP10.31□□□□□ -0.76
ATG4C-202ENST00000371118 ZNF579Q8NAF0 562 aaKnown RBP10.31□□□□□ -0.76
ATG4C-202ENST00000371118 TRIM52Q96A61 297 aa10.31□□□□□ -0.76
ATG4C-202ENST00000371118 ABCA6Q8N139 1617 aa10.3□□□□□ -0.76
ATG4C-202ENST00000371118 MYO3AQ8NEV4 1616 aa10.3□□□□□ -0.76
ATG4C-202ENST00000371118 ALKQ9UM73 1620 aa10.3□□□□□ -0.76
ATG4C-202ENST00000371118 AGLP35573 1532 aa10.3□□□□□ -0.76
ATG4C-202ENST00000371118 STAG3Q9UJ98 1225 aa10.3□□□□□ -0.76
ATG4C-202ENST00000371118 FARP1Q9Y4F1 1045 aaPredicted RBP10.3□□□□□ -0.76
ATG4C-202ENST00000371118 ARHGAP5Q13017 1502 aa10.29□□□□□ -0.76
ATG4C-202ENST00000371118 CDK13Q14004 1512 aaKnown RBP10.28□□□□□ -0.76
ATG4C-202ENST00000371118 GGT6Q6P531 493 aa10.28□□□□□ -0.76
ATG4C-202ENST00000371118 SRCAPQ6ZRS2 3230 aa10.28□□□□□ -0.76
ATG4C-202ENST00000371118 MYO5CQ9NQX4 1742 aa10.27□□□□□ -0.76
ATG4C-202ENST00000371118 SAMD9Q5K651 1589 aa10.27□□□□□ -0.76
ATG4C-202ENST00000371118 ANKLE2Q86XL3 938 aa10.27□□□□□ -0.77
ATG4C-202ENST00000371118 KDM5CP41229 1560 aa10.26□□□□□ -0.77
ATG4C-202ENST00000371118 REREQ9P2R6 1566 aa10.26□□□□□ -0.77
ATG4C-202ENST00000371118 ZNF142P52746 1687 aaPredicted RBP10.26□□□□□ -0.77
ATG4C-202ENST00000371118 CLTCQ00610 1675 aaKnown RBP10.26□□□□□ -0.77
ATG4C-202ENST00000371118 PRXQ9BXM0 1461 aa10.25□□□□□ -0.77
ATG4C-202ENST00000371118 MLH3Q9UHC1 1453 aa10.25□□□□□ -0.77
ATG4C-202ENST00000371118 MROH2AA6NES4 1674 aa10.25□□□□□ -0.77
ATG4C-202ENST00000371118 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.24□□□□□ -0.77
ATG4C-202ENST00000371118 VWDEQ8N2E2 1590 aa10.23□□□□□ -0.77
ATG4C-202ENST00000371118 FAM163AQ96GL9 167 aaPredicted RBP10.23□□□□□ -0.77
ATG4C-202ENST00000371118 POLR1AO95602 1720 aaPredicted RBP10.23□□□□□ -0.77
ATG4C-202ENST00000371118 A2ML1A8K2U0 1454 aa10.23□□□□□ -0.77
ATG4C-202ENST00000371118 NEURL4Q96JN8 1562 aa10.22□□□□□ -0.77
ATG4C-202ENST00000371118 DNMT1P26358 1616 aaKnown RBP10.22□□□□□ -0.77
ATG4C-202ENST00000371118 GALR2O43603 387 aaPredicted RBP10.22□□□□□ -0.77
ATG4C-202ENST00000371118 CDK11AQ9UQ88 783 aaPredicted RBP10.22□□□□□ -0.77
ATG4C-202ENST00000371118 LRRC7Q96NW7 1537 aa10.22□□□□□ -0.77
ATG4C-202ENST00000371118 MEX3CQ5U5Q3 659 aaKnown RBP10.21□□□□□ -0.77
ATG4C-202ENST00000371118 FBXO31Q5XUX0 539 aaPredicted RBP10.21□□□□□ -0.77
ATG4C-202ENST00000371118 ZNF777Q9ULD5 760 aaPredicted RBP10.21□□□□□ -0.77
ATG4C-202ENST00000371118 NPHP4O75161 1426 aaPredicted RBP10.2□□□□□ -0.78
ATG4C-202ENST00000371118 KIF14Q15058 1648 aa10.2□□□□□ -0.78
ATG4C-202ENST00000371118 MAMSTRQ6ZN01 415 aa10.2□□□□□ -0.78
ATG4C-202ENST00000371118 RNF17Q9BXT8 1623 aaKnown RBP10.2□□□□□ -0.78
ATG4C-202ENST00000371118 IFNLR1Q8IU57 520 aaPredicted RBP10.19□□□□□ -0.78
ATG4C-202ENST00000371118 THEMISQ8N1K5 641 aaPredicted RBP10.19□□□□□ -0.78
ATG4C-202ENST00000371118 KIDINS220Q9ULH0 1771 aa10.19□□□□□ -0.78
ATG4C-202ENST00000371118 SPAG9O60271 1321 aaKnown RBP10.18□□□□□ -0.78
ATG4C-202ENST00000371118 ZRANB1Q9UGI0 708 aa10.18□□□□□ -0.78
ATG4C-202ENST00000371118 TNRQ92752 1358 aa10.17□□□□□ -0.78
ATG4C-202ENST00000371118 STRCP1A6NGW2 1772 aa10.16□□□□□ -0.78
ATG4C-202ENST00000371118 PLEKHG5O94827 1062 aa10.16□□□□□ -0.78
ATG4C-202ENST00000371118 RXRBP28702 533 aa10.16□□□□□ -0.78
ATG4C-202ENST00000371118 ZNF772Q68DY9 489 aaPredicted RBP10.16□□□□□ -0.78
ATG4C-202ENST00000371118 ABCC1P33527 1531 aa10.16□□□□□ -0.78
ATG4C-202ENST00000371118 ITSN2Q9NZM3 1697 aa10.15□□□□□ -0.78
ATG4C-202ENST00000371118 HNRNPMP52272 730 aaKnown RBP eCLIP10.15□□□□□ -0.78
ATG4C-202ENST00000371118 CDAN1Q8IWY9 1227 aa10.15□□□□□ -0.78
ATG4C-202ENST00000371118 PLCD3Q8N3E9 789 aa10.15□□□□□ -0.78
ATG4C-202ENST00000371118 CLIP1P30622 1438 aa10.15□□□□□ -0.79
ATG4C-202ENST00000371118 FAM135BQ49AJ0 1406 aa10.14□□□□□ -0.79
ATG4C-202ENST00000371118 CDC42BPBQ9Y5S2 1711 aa10.13□□□□□ -0.79
ATG4C-202ENST00000371118 IQGAP1P46940 1657 aa10.13□□□□□ -0.79
ATG4C-202ENST00000371118 POTEJP0CG39 1038 aa10.13□□□□□ -0.79
ATG4C-202ENST00000371118 MIER1Q8N108 512 aa10.13□□□□□ -0.79
ATG4C-202ENST00000371118 RBM33Q96EV2 1170 aaKnown RBP10.13□□□□□ -0.79
ATG4C-202ENST00000371118 FAM135AQ9P2D6 1515 aa10.12□□□□□ -0.79
ATG4C-202ENST00000371118 NUTM2BA6NNL0 878 aaPredicted RBP10.12□□□□□ -0.79
ATG4C-202ENST00000371118 NUTM2EB1AL46 878 aaPredicted RBP10.12□□□□□ -0.79
ATG4C-202ENST00000371118 NUTM2DQ5VT03 806 aaPredicted RBP10.12□□□□□ -0.79
ATG4C-202ENST00000371118 NUTM2AQ8IVF1 878 aaPredicted RBP10.12□□□□□ -0.79
ATG4C-202ENST00000371118 SYNMO15061 1565 aa10.12□□□□□ -0.79
ATG4C-202ENST00000371118 A2MP01023 1474 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms