RNA–Protein interactions for RNA: ENST00000370940.5

HHLA3-203, Transcript of HERV-H LTR-associating 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HHLA3, Length 775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3-203ENST00000370940 C3P01024 1663 aa12.51□□□□□ -0.41
HHLA3-203ENST00000370940 PTPRTO14522 1441 aa12.51□□□□□ -0.41
HHLA3-203ENST00000370940 CLIP1P30622 1438 aa12.51□□□□□ -0.41
HHLA3-203ENST00000370940 REREQ9P2R6 1566 aa12.51□□□□□ -0.41
HHLA3-203ENST00000370940 RGL2O15211 777 aa12.5□□□□□ -0.41
HHLA3-203ENST00000370940 CDC42BPBQ9Y5S2 1711 aa12.5□□□□□ -0.41
HHLA3-203ENST00000370940 LTBP4Q8N2S1 1624 aa12.49□□□□□ -0.41
HHLA3-203ENST00000370940 PAXIP1Q6ZW49 1069 aaPredicted RBP12.49□□□□□ -0.41
HHLA3-203ENST00000370940 ESF1Q9H501 851 aaKnown RBP12.49□□□□□ -0.41
HHLA3-203ENST00000370940 SETD1BQ9UPS6 1966 aaKnown RBP12.49□□□□□ -0.41
HHLA3-203ENST00000370940 ABCC1P33527 1531 aa12.48□□□□□ -0.41
HHLA3-203ENST00000370940 AGLP35573 1532 aa12.48□□□□□ -0.41
HHLA3-203ENST00000370940 SPDYE2BA6NHP3 402 aa12.48□□□□□ -0.41
HHLA3-203ENST00000370940 SPDYE6P0CI01 402 aa12.48□□□□□ -0.41
HHLA3-203ENST00000370940 SPDYE2Q495Y8 402 aa12.48□□□□□ -0.41
HHLA3-203ENST00000370940 NCOA1Q15788 1441 aa12.47□□□□□ -0.41
HHLA3-203ENST00000370940 PREX2Q70Z35 1606 aa12.47□□□□□ -0.41
HHLA3-203ENST00000370940 SPATA31D1Q6ZQQ2 1576 aa12.47□□□□□ -0.41
HHLA3-203ENST00000370940 DSG3P32926 999 aa12.46□□□□□ -0.41
HHLA3-203ENST00000370940 KIDINS220Q9ULH0 1771 aa12.46□□□□□ -0.42
HHLA3-203ENST00000370940 ITSN2Q9NZM3 1697 aa12.45□□□□□ -0.42
HHLA3-203ENST00000370940 ZNF777Q9ULD5 760 aaPredicted RBP12.45□□□□□ -0.42
HHLA3-203ENST00000370940 NCKAP5LQ9HCH0 1330 aa12.44□□□□□ -0.42
HHLA3-203ENST00000370940 PLCD3Q8N3E9 789 aa12.44□□□□□ -0.42
HHLA3-203ENST00000370940 ZNF335Q9H4Z2 1342 aaPredicted RBP12.43□□□□□ -0.42
HHLA3-203ENST00000370940 CFAP44Q96MT7 982 aa12.43□□□□□ -0.42
HHLA3-203ENST00000370940 CAMSAP1Q5T5Y3 1602 aa12.43□□□□□ -0.42
HHLA3-203ENST00000370940 CASKIN1Q8WXD9 1431 aa12.43□□□□□ -0.42
HHLA3-203ENST00000370940 CNTLNQ9NXG0 1405 aa12.43□□□□□ -0.42
HHLA3-203ENST00000370940 ZMYM3Q14202 1370 aa12.43□□□□□ -0.42
HHLA3-203ENST00000370940 HNRNPMP52272 730 aaKnown RBP eCLIP12.42□□□□□ -0.42
HHLA3-203ENST00000370940 SAMD9LQ8IVG5 1584 aa12.42□□□□□ -0.42
HHLA3-203ENST00000370940 CDC42BPAQ5VT25 1732 aa12.42□□□□□ -0.42
HHLA3-203ENST00000370940 CCDC18Q5T9S5 1454 aa12.4□□□□□ -0.42
HHLA3-203ENST00000370940 SPAG9O60271 1321 aaKnown RBP12.4□□□□□ -0.42
HHLA3-203ENST00000370940 NPATQ14207 1427 aa12.4□□□□□ -0.42
HHLA3-203ENST00000370940 SYCP2Q9BX26 1530 aa12.4□□□□□ -0.42
HHLA3-203ENST00000370940 IQSEC2Q5JU85 1478 aa12.4□□□□□ -0.43
HHLA3-203ENST00000370940 UBAP1LF5GYI3 381 aa12.39□□□□□ -0.43
HHLA3-203ENST00000370940 MIER1Q8N108 512 aa12.39□□□□□ -0.43
HHLA3-203ENST00000370940 GPATCH8Q9UKJ3 1502 aaKnown RBP12.38□□□□□ -0.43
HHLA3-203ENST00000370940 SUPT6HQ7KZ85 1726 aaKnown RBP12.38□□□□□ -0.43
HHLA3-203ENST00000370940 GGT6Q6P531 493 aa12.37□□□□□ -0.43
HHLA3-203ENST00000370940 SPRYD3Q8NCJ5 442 aa12.37□□□□□ -0.43
HHLA3-203ENST00000370940 MROH2AA6NES4 1674 aa12.37□□□□□ -0.43
HHLA3-203ENST00000370940 CLTCQ00610 1675 aaKnown RBP12.36□□□□□ -0.43
HHLA3-203ENST00000370940 ATP7AQ04656 1500 aa12.36□□□□□ -0.43
HHLA3-203ENST00000370940 PTPRKQ15262 1439 aa12.36□□□□□ -0.43
HHLA3-203ENST00000370940 A2MP01023 1474 aa12.35□□□□□ -0.43
HHLA3-203ENST00000370940 TSHZ2Q9NRE2 1034 aa12.35□□□□□ -0.43
HHLA3-203ENST00000370940 CFDP1Q9UEE9 299 aaPredicted RBP12.35□□□□□ -0.43
HHLA3-203ENST00000370940 MYO3AQ8NEV4 1616 aa12.35□□□□□ -0.43
HHLA3-203ENST00000370940 PLXNC1O60486 1568 aa12.35□□□□□ -0.43
HHLA3-203ENST00000370940 FYCO1Q9BQS8 1478 aa12.34□□□□□ -0.43
HHLA3-203ENST00000370940 CEP170BQ9Y4F5 1589 aaPredicted RBP12.34□□□□□ -0.43
HHLA3-203ENST00000370940 ZNF644Q9H582 1327 aaPredicted RBP12.34□□□□□ -0.43
HHLA3-203ENST00000370940 TCOF1Q13428 1488 aaKnown RBP12.34□□□□□ -0.43
HHLA3-203ENST00000370940 KIAA1107Q9UPP5 1409 aa12.33□□□□□ -0.44
HHLA3-203ENST00000370940 INO80Q9ULG1 1556 aaPredicted RBP12.33□□□□□ -0.44
HHLA3-203ENST00000370940 PLA2R1Q13018 1463 aa12.33□□□□□ -0.44
HHLA3-203ENST00000370940 ZNF142P52746 1687 aaPredicted RBP12.32□□□□□ -0.44
HHLA3-203ENST00000370940 TPRNQ4KMQ1 711 aa12.32□□□□□ -0.44
HHLA3-203ENST00000370940 CCNB3Q8WWL7 1395 aa12.31□□□□□ -0.44
HHLA3-203ENST00000370940 PLEKHH2Q8IVE3 1493 aa12.29□□□□□ -0.44
HHLA3-203ENST00000370940 HSPA1LP34931 641 aa12.29□□□□□ -0.44
HHLA3-203ENST00000370940 PIP4K2BP78356 416 aa12.29□□□□□ -0.44
HHLA3-203ENST00000370940 FBXO31Q5XUX0 539 aaPredicted RBP12.29□□□□□ -0.44
HHLA3-203ENST00000370940 CHGAP10645 457 aaKnown RBP12.28□□□□□ -0.44
HHLA3-203ENST00000370940 A2ML1A8K2U0 1454 aa12.27□□□□□ -0.44
HHLA3-203ENST00000370940 DNMT1P26358 1616 aaKnown RBP12.27□□□□□ -0.44
HHLA3-203ENST00000370940 CIZ1Q9ULV3 898 aaPredicted RBP12.27□□□□□ -0.45
HHLA3-203ENST00000370940 MTUS2Q5JR59 1369 aa12.27□□□□□ -0.45
HHLA3-203ENST00000370940 MBD5Q9P267 1494 aa12.27□□□□□ -0.45
HHLA3-203ENST00000370940 ZBTB47Q9UFB7 747 aaPredicted RBP12.26□□□□□ -0.45
HHLA3-203ENST00000370940 NEURL4Q96JN8 1562 aa12.25□□□□□ -0.45
HHLA3-203ENST00000370940 ADGBQ8N7X0 1667 aa12.25□□□□□ -0.45
HHLA3-203ENST00000370940 KIF3BO15066 747 aa12.24□□□□□ -0.45
HHLA3-203ENST00000370940 TIAM1Q13009 1591 aa12.24□□□□□ -0.45
HHLA3-203ENST00000370940 DHX29Q7Z478 1369 aaKnown RBP12.24□□□□□ -0.45
HHLA3-203ENST00000370940 TNRQ92752 1358 aa12.24□□□□□ -0.45
HHLA3-203ENST00000370940 MED1Q15648 1581 aaPredicted RBP12.23□□□□□ -0.45
HHLA3-203ENST00000370940 SHANK2Q9UPX8 1470 aa12.23□□□□□ -0.45
HHLA3-203ENST00000370940 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.23□□□□□ -0.45
HHLA3-203ENST00000370940 RTEL1-TNFRSF6BF6WH68 1400 aa12.22□□□□□ -0.45
HHLA3-203ENST00000370940 TOM1O60784 492 aa12.22□□□□□ -0.45
HHLA3-203ENST00000370940 HS6ST3Q8IZP7 471 aa12.22□□□□□ -0.45
HHLA3-203ENST00000370940 CPS1P31327 1500 aa12.21□□□□□ -0.46
HHLA3-203ENST00000370940 PZPP20742 1482 aa12.21□□□□□ -0.46
HHLA3-203ENST00000370940 WASHC2CQ9Y4E1 1318 aa12.2□□□□□ -0.46
HHLA3-203ENST00000370940 ANKLE2Q86XL3 938 aa12.2□□□□□ -0.46
HHLA3-203ENST00000370940 VWDEQ8N2E2 1590 aa12.2□□□□□ -0.46
HHLA3-203ENST00000370940 POLR1AO95602 1720 aaPredicted RBP12.2□□□□□ -0.46
HHLA3-203ENST00000370940 ALKQ9UM73 1620 aa12.19□□□□□ -0.46
HHLA3-203ENST00000370940 PLEKHG5O94827 1062 aa12.19□□□□□ -0.46
HHLA3-203ENST00000370940 KDM5DQ9BY66 1539 aa12.19□□□□□ -0.46
HHLA3-203ENST00000370940 EHBP1L1Q8N3D4 1523 aa12.18□□□□□ -0.46
HHLA3-203ENST00000370940 THEMISQ8N1K5 641 aaPredicted RBP12.18□□□□□ -0.46
HHLA3-203ENST00000370940 RNF25Q96BH1 459 aaPredicted RBP12.18□□□□□ -0.46
HHLA3-203ENST00000370940 NPHP4O75161 1426 aaPredicted RBP12.18□□□□□ -0.46
HHLA3-203ENST00000370940 CEP162Q5TB80 1403 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 138.9 ms