RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 VGFO15240 615 aaPredicted RBP24.68■■□□□ 1.54
LMO4-202ENST00000370544 HDAC5Q9UQL6 1122 aa24.68■■□□□ 1.54
LMO4-202ENST00000370544 MFAP1P55081 439 aaKnown RBP24.68■■□□□ 1.54
LMO4-202ENST00000370544 USP47Q96K76 1375 aa24.68■■□□□ 1.54
LMO4-202ENST00000370544 LTV1Q96GA3 475 aaPredicted RBP24.68■■□□□ 1.54
LMO4-202ENST00000370544 GPATCH3Q96I76 525 aa24.67■■□□□ 1.54
LMO4-202ENST00000370544 ISY1Q9ULR0 285 aaKnown RBP24.67■■□□□ 1.54
LMO4-202ENST00000370544 RAD54L2Q9Y4B4 1467 aa24.67■■□□□ 1.54
LMO4-202ENST00000370544 RRP7AQ9Y3A4 280 aaKnown RBP24.66■■□□□ 1.54
LMO4-202ENST00000370544 CHMP3Q9Y3E7 222 aa24.66■■□□□ 1.54
LMO4-202ENST00000370544 SLKQ9H2G2 1235 aaPredicted RBP24.65■■□□□ 1.54
LMO4-202ENST00000370544 EVC2Q86UK5 1308 aa24.65■■□□□ 1.54
LMO4-202ENST00000370544 PTMSP20962 102 aa24.65■■□□□ 1.54
LMO4-202ENST00000370544 GORABQ5T7V8 394 aa24.64■■□□□ 1.53
LMO4-202ENST00000370544 CGNL1Q0VF96 1302 aa24.64■■□□□ 1.53
LMO4-202ENST00000370544 TRIM6-TRIM34B2RNG4 842 aa24.64■■□□□ 1.53
LMO4-202ENST00000370544 CCDC9Q9Y3X0 531 aaKnown RBP24.63■■□□□ 1.53
LMO4-202ENST00000370544 MYOM3Q5VTT5 1437 aa24.63■■□□□ 1.53
LMO4-202ENST00000370544 MSNP26038 577 aaKnown RBP24.62■■□□□ 1.53
LMO4-202ENST00000370544 DRC7Q8IY82 874 aa24.62■■□□□ 1.53
LMO4-202ENST00000370544 PRKRIP1Q9H875 184 aaPredicted RBP24.62■■□□□ 1.53
LMO4-202ENST00000370544 DEKP35659 375 aaKnown RBP24.61■■□□□ 1.53
LMO4-202ENST00000370544 TAF7LQ5H9L4 462 aa24.61■■□□□ 1.53
LMO4-202ENST00000370544 COG3Q96JB2 828 aa24.6■■□□□ 1.53
LMO4-202ENST00000370544 CHAF1AQ13111 956 aaPredicted RBP24.6■■□□□ 1.53
LMO4-202ENST00000370544 CUX1P39880 1505 aa24.59■■□□□ 1.53
LMO4-202ENST00000370544 FGD6Q6ZV73 1430 aa24.57■■□□□ 1.52
LMO4-202ENST00000370544 CYB5RLQ6IPT4 315 aa24.56■■□□□ 1.52
LMO4-202ENST00000370544 OSCARQ8IYS5 282 aa24.56■■□□□ 1.52
LMO4-202ENST00000370544 MINK1Q8N4C8 1332 aaPredicted RBP24.55■■□□□ 1.52
LMO4-202ENST00000370544 HTATSF1O43719 755 aaKnown RBP24.55■■□□□ 1.52
LMO4-202ENST00000370544 E9PSI1 815 aa24.54■■□□□ 1.52
LMO4-202ENST00000370544 GZF1Q9H116 711 aaPredicted RBP24.52■■□□□ 1.52
LMO4-202ENST00000370544 TSHZ2Q9NRE2 1034 aa24.52■■□□□ 1.52
LMO4-202ENST00000370544 IPO9Q96P70 1041 aaKnown RBP24.52■■□□□ 1.52
LMO4-202ENST00000370544 HSP90B1P14625 803 aaKnown RBP24.51■■□□□ 1.51
LMO4-202ENST00000370544 TMX4Q9H1E5 349 aaPredicted RBP24.51■■□□□ 1.51
LMO4-202ENST00000370544 KIF21BO75037 1637 aa24.5■■□□□ 1.51
LMO4-202ENST00000370544 ZBED9Q6R2W3 1325 aa24.5■■□□□ 1.51
LMO4-202ENST00000370544 BCL2L13Q9BXK5 485 aa24.49■■□□□ 1.51
LMO4-202ENST00000370544 ELL2O00472 640 aaPredicted RBP24.49■■□□□ 1.51
LMO4-202ENST00000370544 SYAP1Q96A49 352 aaPredicted RBP24.49■■□□□ 1.51
LMO4-202ENST00000370544 ZNF644Q9H582 1327 aaPredicted RBP24.49■■□□□ 1.51
LMO4-202ENST00000370544 CLSTN1O94985 981 aa24.48■■□□□ 1.51
LMO4-202ENST00000370544 AQRO60306 1485 aaKnown RBP eCLIP24.47■■□□□ 1.51
LMO4-202ENST00000370544 ZKSCAN2Q63HK3 967 aa24.47■■□□□ 1.51
LMO4-202ENST00000370544 CENPQQ7L2Z9 268 aaPredicted RBP24.47■■□□□ 1.51
LMO4-202ENST00000370544 NCAPD3P42695 1498 aa24.47■■□□□ 1.51
LMO4-202ENST00000370544 PRDM2Q13029 1718 aa24.47■■□□□ 1.51
LMO4-202ENST00000370544 RRP1P56182 461 aaKnown RBP24.47■■□□□ 1.51
LMO4-202ENST00000370544 LRRC9Q6ZRR7 1453 aa24.46■■□□□ 1.51
LMO4-202ENST00000370544 PLIN1O60240 522 aa24.46■■□□□ 1.51
LMO4-202ENST00000370544 C1orf141Q5JVX7 400 aa24.46■■□□□ 1.51
LMO4-202ENST00000370544 NOL8Q76FK4 1167 aaKnown RBP24.45■■□□□ 1.5
LMO4-202ENST00000370544 APAF1O14727 1248 aa24.43■■□□□ 1.5
LMO4-202ENST00000370544 FOXD4L1Q9NU39 408 aa24.43■■□□□ 1.5
LMO4-202ENST00000370544 CASKIN1Q8WXD9 1431 aa24.42■■□□□ 1.5
LMO4-202ENST00000370544 DIAPH1O60610 1272 aaKnown RBP24.42■■□□□ 1.5
LMO4-202ENST00000370544 ST18O60284 1047 aa24.41■■□□□ 1.5
LMO4-202ENST00000370544 FYCO1Q9BQS8 1478 aa24.41■■□□□ 1.5
LMO4-202ENST00000370544 EXOC6Q8TAG9 804 aa24.41■■□□□ 1.5
LMO4-202ENST00000370544 CRBNQ96SW2 442 aa24.4■■□□□ 1.5
LMO4-202ENST00000370544 NCOA2Q15596 1464 aa24.4■■□□□ 1.5
LMO4-202ENST00000370544 ANKRD45Q5TZF3 282 aa24.39■■□□□ 1.5
LMO4-202ENST00000370544 ANKRD50Q9ULJ7 1429 aa24.39■■□□□ 1.49
LMO4-202ENST00000370544 TEFQ10587 303 aa24.39■■□□□ 1.49
LMO4-202ENST00000370544 KIAA2012Q0VF49 1180 aa24.38■■□□□ 1.49
LMO4-202ENST00000370544 CSPP1Q1MSJ5 1256 aa24.38■■□□□ 1.49
LMO4-202ENST00000370544 COG6Q9Y2V7 657 aa24.37■■□□□ 1.49
LMO4-202ENST00000370544 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.37■■□□□ 1.49
LMO4-202ENST00000370544 GTF2E1P29083 439 aaPredicted RBP24.37■■□□□ 1.49
LMO4-202ENST00000370544 STAC3Q96MF2 364 aa24.36■■□□□ 1.49
LMO4-202ENST00000370544 GOLGA6L3A6NEY3 463 aa24.36■■□□□ 1.49
LMO4-202ENST00000370544 FAM161AQ3B820 660 aa24.36■■□□□ 1.49
LMO4-202ENST00000370544 CCDC7Q96M83 1385 aa24.36■■□□□ 1.49
LMO4-202ENST00000370544 FAM69CQ0P6D2 419 aa24.36■■□□□ 1.49
LMO4-202ENST00000370544 KIF16BQ96L93 1317 aa24.35■■□□□ 1.49
LMO4-202ENST00000370544 RILPL2Q969X0 211 aa24.35■■□□□ 1.49
LMO4-202ENST00000370544 TPM4P67936 248 aa24.35■■□□□ 1.49
LMO4-202ENST00000370544 KIF7Q2M1P5 1343 aa24.34■■□□□ 1.49
LMO4-202ENST00000370544 NGEFQ8N5V2 710 aa24.34■■□□□ 1.49
LMO4-202ENST00000370544 GRIN2BQ13224 1484 aa24.34■■□□□ 1.49
LMO4-202ENST00000370544 RIPK4P57078 832 aa24.33■■□□□ 1.49
LMO4-202ENST00000370544 G3V3G9 751 aa24.33■■□□□ 1.49
LMO4-202ENST00000370544 FRAT2O75474 233 aaPredicted RBP24.33■■□□□ 1.49
LMO4-202ENST00000370544 EVA1CP58658 441 aa24.33■■□□□ 1.49
LMO4-202ENST00000370544 DCAF8Q5TAQ9 597 aa24.33■■□□□ 1.49
LMO4-202ENST00000370544 CCDC34Q96HJ3 373 aa24.33■■□□□ 1.49
LMO4-202ENST00000370544 TOMM22Q9NS69 142 aa24.33■■□□□ 1.49
LMO4-202ENST00000370544 PDE4AP27815 886 aa24.32■■□□□ 1.48
LMO4-202ENST00000370544 TTC5Q8N0Z6 440 aa24.31■■□□□ 1.48
LMO4-202ENST00000370544 ARHGAP5Q13017 1502 aa24.3■■□□□ 1.48
LMO4-202ENST00000370544 DDX19BQ9UMR2 479 aa24.3■■□□□ 1.48
LMO4-202ENST00000370544 MIA2Q96PC5 1412 aa24.3■■□□□ 1.48
LMO4-202ENST00000370544 ERICH3Q5RHP9 1530 aa24.3■■□□□ 1.48
LMO4-202ENST00000370544 EIF2S2P20042 333 aaKnown RBP24.3■■□□□ 1.48
LMO4-202ENST00000370544 RUNDC1Q96C34 613 aa24.3■■□□□ 1.48
LMO4-202ENST00000370544 KIF3AQ9Y496 699 aa24.29■■□□□ 1.48
LMO4-202ENST00000370544 PSME1Q06323 249 aa24.28■■□□□ 1.48
LMO4-202ENST00000370544 NEXNQ0ZGT2 675 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms