RNA–Protein interactions for RNA: ENST00000369846.8

LCA5-201, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-201ENST00000369846 PLIN1O60240 522 aa10.6□□□□□ -0.71
LCA5-201ENST00000369846 CREBRFQ8IUR6 639 aa10.6□□□□□ -0.71
LCA5-201ENST00000369846 GOLGA6L19H0YKK7 550 aa10.6□□□□□ -0.71
LCA5-201ENST00000369846 PLEKHG5O94827 1062 aa10.6□□□□□ -0.71
LCA5-201ENST00000369846 HOMER1Q86YM7 354 aa10.6□□□□□ -0.71
LCA5-201ENST00000369846 ITPRIPQ8IWB1 547 aa10.6□□□□□ -0.71
LCA5-201ENST00000369846 BECN2A8MW95 431 aa10.59□□□□□ -0.71
LCA5-201ENST00000369846 RNF214Q8ND24 703 aa10.59□□□□□ -0.71
LCA5-201ENST00000369846 IFT57Q9NWB7 429 aa10.59□□□□□ -0.71
LCA5-201ENST00000369846 CCDC184Q52MB2 194 aa10.59□□□□□ -0.71
LCA5-201ENST00000369846 PMFBP1Q8TBY8 1022 aa10.59□□□□□ -0.71
LCA5-201ENST00000369846 CWC15Q9P013 229 aaKnown RBP10.59□□□□□ -0.71
LCA5-201ENST00000369846 TSPY4P0CV99 314 aa10.59□□□□□ -0.71
LCA5-201ENST00000369846 TSPY10P0CW01 314 aa10.59□□□□□ -0.71
LCA5-201ENST00000369846 MTUS2Q5JR59 1369 aa10.58□□□□□ -0.72
LCA5-201ENST00000369846 ESPNB1AK53 854 aa10.58□□□□□ -0.72
LCA5-201ENST00000369846 RDXP35241 583 aaKnown RBP10.58□□□□□ -0.72
LCA5-201ENST00000369846 CDCA8Q53HL2 280 aa10.58□□□□□ -0.72
LCA5-201ENST00000369846 ST18O60284 1047 aa10.57□□□□□ -0.72
LCA5-201ENST00000369846 SKIDA1Q1XH10 827 aa10.57□□□□□ -0.72
LCA5-201ENST00000369846 NPHP1O15259 732 aa10.57□□□□□ -0.72
LCA5-201ENST00000369846 HSP90B1P14625 803 aaKnown RBP10.57□□□□□ -0.72
LCA5-201ENST00000369846 TRAK2O60296 914 aa10.57□□□□□ -0.72
LCA5-201ENST00000369846 ARGLU1Q9NWB6 273 aaPredicted RBP10.57□□□□□ -0.72
LCA5-201ENST00000369846 CENPQQ7L2Z9 268 aaPredicted RBP10.57□□□□□ -0.72
LCA5-201ENST00000369846 CGNQ9P2M7 1197 aaKnown RBP10.57□□□□□ -0.72
LCA5-201ENST00000369846 HSP90B2PQ58FF3 399 aa10.56□□□□□ -0.72
LCA5-201ENST00000369846 ERICH4A6NGS2 130 aa10.56□□□□□ -0.72
LCA5-201ENST00000369846 UQCRHLA0A096LP55 91 aa10.56□□□□□ -0.72
LCA5-201ENST00000369846 UQCRHP07919 91 aa10.56□□□□□ -0.72
LCA5-201ENST00000369846 HMGN5P82970 282 aaKnown RBP10.56□□□□□ -0.72
LCA5-201ENST00000369846 MNS1Q8NEH6 495 aa10.56□□□□□ -0.72
LCA5-201ENST00000369846 PLCD4Q9BRC7 762 aa10.56□□□□□ -0.72
LCA5-201ENST00000369846 CHMP3Q9Y3E7 222 aa10.56□□□□□ -0.72
LCA5-201ENST00000369846 E9PSI1 815 aa10.55□□□□□ -0.72
LCA5-201ENST00000369846 TRERF1Q96PN7 1200 aa10.55□□□□□ -0.72
LCA5-201ENST00000369846 CHMP4AQ9BY43 222 aa10.55□□□□□ -0.72
LCA5-201ENST00000369846 RBM25P49756 843 aaKnown RBP10.55□□□□□ -0.72
LCA5-201ENST00000369846 MPNDQ8N594 471 aa10.55□□□□□ -0.72
LCA5-201ENST00000369846 PHLDB1Q86UU1 1377 aa10.55□□□□□ -0.72
LCA5-201ENST00000369846 KIF16BQ96L93 1317 aa10.54□□□□□ -0.72
LCA5-201ENST00000369846 SETD5Q9C0A6 1442 aa10.54□□□□□ -0.72
LCA5-201ENST00000369846 RRP12Q5JTH9 1297 aaKnown RBP10.54□□□□□ -0.72
LCA5-201ENST00000369846 A0A0G2JS52 829 aa10.54□□□□□ -0.72
LCA5-201ENST00000369846 IPO8O15397 1037 aaKnown RBP10.54□□□□□ -0.72
LCA5-201ENST00000369846 CRBNQ96SW2 442 aa10.54□□□□□ -0.72
LCA5-201ENST00000369846 CCDC39Q9UFE4 941 aa10.54□□□□□ -0.72
LCA5-201ENST00000369846 CBX1P83916 185 aa10.53□□□□□ -0.72
LCA5-201ENST00000369846 DEF6Q9H4E7 631 aa10.53□□□□□ -0.72
LCA5-201ENST00000369846 CLSTN1O94985 981 aa10.53□□□□□ -0.72
LCA5-201ENST00000369846 ARHGAP35Q9NRY4 1499 aa10.53□□□□□ -0.72
LCA5-201ENST00000369846 PDCL3Q9H2J4 239 aa10.52□□□□□ -0.72
LCA5-201ENST00000369846 UNC13AQ9UPW8 1703 aa10.52□□□□□ -0.72
LCA5-201ENST00000369846 RRP1P56182 461 aaKnown RBP10.52□□□□□ -0.73
LCA5-201ENST00000369846 MCTP1Q6DN14 999 aa10.52□□□□□ -0.73
LCA5-201ENST00000369846 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.52□□□□□ -0.73
LCA5-201ENST00000369846 TRIM6-TRIM34B2RNG4 842 aa10.52□□□□□ -0.73
LCA5-201ENST00000369846 PRXQ9BXM0 1461 aa10.52□□□□□ -0.73
LCA5-201ENST00000369846 SF3A1Q15459 793 aaKnown RBP10.52□□□□□ -0.73
LCA5-201ENST00000369846 PLCD3Q8N3E9 789 aa10.52□□□□□ -0.73
LCA5-201ENST00000369846 GOLGA2Q08379 1002 aa10.51□□□□□ -0.73
LCA5-201ENST00000369846 TSPYL1Q9H0U9 437 aa10.51□□□□□ -0.73
LCA5-201ENST00000369846 PES1O00541 588 aaKnown RBP10.51□□□□□ -0.73
LCA5-201ENST00000369846 CUX2O14529 1486 aa10.51□□□□□ -0.73
LCA5-201ENST00000369846 CCDC191Q8NCU4 936 aa10.51□□□□□ -0.73
LCA5-201ENST00000369846 ZNF526Q8TF50 670 aaPredicted RBP10.51□□□□□ -0.73
LCA5-201ENST00000369846 TAF3Q5VWG9 929 aa10.5□□□□□ -0.73
LCA5-201ENST00000369846 LEKR1Q6ZMV7 388 aa10.5□□□□□ -0.73
LCA5-201ENST00000369846 DHX37Q8IY37 1157 aaKnown RBP10.5□□□□□ -0.73
LCA5-201ENST00000369846 CCDC70Q6NSX1 233 aa10.5□□□□□ -0.73
LCA5-201ENST00000369846 PDE3BQ13370 1112 aa10.49□□□□□ -0.73
LCA5-201ENST00000369846 CAVIN1Q6NZI2 390 aaKnown RBP10.49□□□□□ -0.73
LCA5-201ENST00000369846 GPATCH11Q8N954 259 aa10.49□□□□□ -0.73
LCA5-201ENST00000369846 IPO4Q8TEX9 1081 aaKnown RBP10.49□□□□□ -0.73
LCA5-201ENST00000369846 CCDC173Q0VFZ6 552 aa10.49□□□□□ -0.73
LCA5-201ENST00000369846 C14orf37Q86TY3 774 aa10.49□□□□□ -0.73
LCA5-201ENST00000369846 KIF3AQ9Y496 699 aa10.49□□□□□ -0.73
LCA5-201ENST00000369846 SMC4Q9NTJ3 1288 aa10.48□□□□□ -0.73
LCA5-201ENST00000369846 ATP6V1DQ9Y5K8 247 aa10.48□□□□□ -0.73
LCA5-201ENST00000369846 TPD52L1Q16890 204 aaPredicted RBP10.48□□□□□ -0.73
LCA5-201ENST00000369846 CCDC34Q96HJ3 373 aa10.48□□□□□ -0.73
LCA5-201ENST00000369846 ACBD3Q9H3P7 528 aa10.48□□□□□ -0.73
LCA5-201ENST00000369846 GRPEL1Q9HAV7 217 aa10.48□□□□□ -0.73
LCA5-201ENST00000369846 GORABQ5T7V8 394 aa10.47□□□□□ -0.73
LCA5-201ENST00000369846 RUFY1Q96T51 708 aa10.47□□□□□ -0.73
LCA5-201ENST00000369846 CENPJQ9HC77 1338 aaPredicted RBP10.47□□□□□ -0.73
LCA5-201ENST00000369846 PDIA4P13667 645 aaKnown RBP10.46□□□□□ -0.73
LCA5-201ENST00000369846 PDCL2Q8N4E4 241 aa10.46□□□□□ -0.73
LCA5-201ENST00000369846 BCL2L13Q9BXK5 485 aa10.46□□□□□ -0.73
LCA5-201ENST00000369846 KTN1Q86UP2 1357 aaKnown RBP10.46□□□□□ -0.73
LCA5-201ENST00000369846 TNNT1P13805 278 aa10.46□□□□□ -0.73
LCA5-201ENST00000369846 COG6Q9Y2V7 657 aa10.46□□□□□ -0.73
LCA5-201ENST00000369846 ZBED9Q6R2W3 1325 aa10.46□□□□□ -0.73
LCA5-201ENST00000369846 TSR1Q2NL82 804 aaKnown RBP10.46□□□□□ -0.74
LCA5-201ENST00000369846 TMF1P82094 1093 aa10.46□□□□□ -0.74
LCA5-201ENST00000369846 FBXW7Q969H0 707 aa10.45□□□□□ -0.74
LCA5-201ENST00000369846 AK7Q96M32 723 aa10.45□□□□□ -0.74
LCA5-201ENST00000369846 POGKQ9P215 609 aa10.45□□□□□ -0.74
LCA5-201ENST00000369846 ATAD2BQ9ULI0 1458 aa10.45□□□□□ -0.74
LCA5-201ENST00000369846 CCDC146Q8IYE0 955 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms