RNA–Protein interactions for RNA: ENST00000369729.7

SFR1-202, Transcript of SWI5 dependent homologous recombination repair protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFR1, Length 1,503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFR1-202ENST00000369729 MLH3Q9UHC1 1453 aa13.07□□□□□ -0.32
SFR1-202ENST00000369729 RAB3GAP2Q9H2M9 1393 aa13.07□□□□□ -0.32
SFR1-202ENST00000369729 SAMD1Q6SPF0 538 aaPredicted RBP13.07□□□□□ -0.32
SFR1-202ENST00000369729 MAGI2Q86UL8 1455 aa13.07□□□□□ -0.32
SFR1-202ENST00000369729 ATP7AQ04656 1500 aa13.06□□□□□ -0.32
SFR1-202ENST00000369729 PLXNC1O60486 1568 aa13.06□□□□□ -0.32
SFR1-202ENST00000369729 KDM5CP41229 1560 aa13.06□□□□□ -0.32
SFR1-202ENST00000369729 ANKRD50Q9ULJ7 1429 aa13.05□□□□□ -0.32
SFR1-202ENST00000369729 GCC2Q8IWJ2 1684 aa13.05□□□□□ -0.32
SFR1-202ENST00000369729 DUOX2Q9NRD8 1548 aa13.05□□□□□ -0.32
SFR1-202ENST00000369729 ZFYVE16Q7Z3T8 1539 aa13.04□□□□□ -0.32
SFR1-202ENST00000369729 HECW2Q9P2P5 1572 aa13.04□□□□□ -0.32
SFR1-202ENST00000369729 INO80Q9ULG1 1556 aaPredicted RBP13.04□□□□□ -0.32
SFR1-202ENST00000369729 ERBINQ96RT1 1412 aa13.03□□□□□ -0.32
SFR1-202ENST00000369729 TRIM52Q96A61 297 aa13.03□□□□□ -0.32
SFR1-202ENST00000369729 ZMYM4Q5VZL5 1548 aa13.02□□□□□ -0.32
SFR1-202ENST00000369729 RICTORQ6R327 1708 aa13.02□□□□□ -0.33
SFR1-202ENST00000369729 CCER1Q8TC90 406 aaPredicted RBP13.02□□□□□ -0.33
SFR1-202ENST00000369729 DHX29Q7Z478 1369 aaKnown RBP13.01□□□□□ -0.33
SFR1-202ENST00000369729 KDM6BO15054 1643 aa12.99□□□□□ -0.33
SFR1-202ENST00000369729 A2MP01023 1474 aa12.99□□□□□ -0.33
SFR1-202ENST00000369729 KIDINS220Q9ULH0 1771 aa12.98□□□□□ -0.33
SFR1-202ENST00000369729 FRMPD1Q5SYB0 1578 aa12.97□□□□□ -0.33
SFR1-202ENST00000369729 ATP10AO60312 1499 aa12.97□□□□□ -0.33
SFR1-202ENST00000369729 KANK1Q14678 1352 aa12.97□□□□□ -0.33
SFR1-202ENST00000369729 CLSPNQ9HAW4 1339 aa12.96□□□□□ -0.33
SFR1-202ENST00000369729 COL17A1Q9UMD9 1497 aaPredicted RBP12.95□□□□□ -0.34
SFR1-202ENST00000369729 KIF3BO15066 747 aa12.95□□□□□ -0.34
SFR1-202ENST00000369729 EIF2AK4Q9P2K8 1649 aaKnown RBP12.95□□□□□ -0.34
SFR1-202ENST00000369729 NUP155O75694 1391 aa12.95□□□□□ -0.34
SFR1-202ENST00000369729 DIP2CQ9Y2E4 1556 aa12.94□□□□□ -0.34
SFR1-202ENST00000369729 SLC4A1APQ9BWU0 796 aaKnown RBP12.93□□□□□ -0.34
SFR1-202ENST00000369729 ABCA6Q8N139 1617 aa12.93□□□□□ -0.34
SFR1-202ENST00000369729 YEATS2Q9ULM3 1422 aa12.93□□□□□ -0.34
SFR1-202ENST00000369729 ARHGEF40Q8TER5 1519 aa12.92□□□□□ -0.34
SFR1-202ENST00000369729 REREQ9P2R6 1566 aa12.92□□□□□ -0.34
SFR1-202ENST00000369729 ZEB1P37275 1124 aaPredicted RBP12.92□□□□□ -0.34
SFR1-202ENST00000369729 MPHOSPH9Q99550 1183 aa12.92□□□□□ -0.34
SFR1-202ENST00000369729 DHX57Q6P158 1386 aaKnown RBP12.92□□□□□ -0.34
SFR1-202ENST00000369729 POLA2Q14181 598 aa12.91□□□□□ -0.34
SFR1-202ENST00000369729 RBM42Q9BTD8 480 aaKnown RBP12.9□□□□□ -0.34
SFR1-202ENST00000369729 UNC13BO14795 1591 aa12.9□□□□□ -0.34
SFR1-202ENST00000369729 KDM5DQ9BY66 1539 aa12.9□□□□□ -0.34
SFR1-202ENST00000369729 GGT6Q6P531 493 aa12.89□□□□□ -0.35
SFR1-202ENST00000369729 AGLP35573 1532 aa12.89□□□□□ -0.35
SFR1-202ENST00000369729 ARID4BQ4LE39 1312 aaPredicted RBP12.89□□□□□ -0.35
SFR1-202ENST00000369729 ESF1Q9H501 851 aaKnown RBP12.88□□□□□ -0.35
SFR1-202ENST00000369729 BCORL1Q5H9F3 1711 aa12.87□□□□□ -0.35
SFR1-202ENST00000369729 MYCNP04198 464 aaPredicted RBP12.87□□□□□ -0.35
SFR1-202ENST00000369729 WASHC2CQ9Y4E1 1318 aa12.86□□□□□ -0.35
SFR1-202ENST00000369729 FAM135AQ9P2D6 1515 aa12.86□□□□□ -0.35
SFR1-202ENST00000369729 PKD2Q13563 968 aa12.86□□□□□ -0.35
SFR1-202ENST00000369729 DEPDC5O75140 1603 aa12.86□□□□□ -0.35
SFR1-202ENST00000369729 RNF17Q9BXT8 1623 aaKnown RBP12.86□□□□□ -0.35
SFR1-202ENST00000369729 PRDM15P57071 1507 aaPredicted RBP12.85□□□□□ -0.35
SFR1-202ENST00000369729 IQGAP3Q86VI3 1631 aa12.85□□□□□ -0.35
SFR1-202ENST00000369729 PZPP20742 1482 aa12.85□□□□□ -0.35
SFR1-202ENST00000369729 CHRDL2Q6WN34 429 aa12.83□□□□□ -0.36
SFR1-202ENST00000369729 LMTK2Q8IWU2 1503 aa12.82□□□□□ -0.36
SFR1-202ENST00000369729 VWDEQ8N2E2 1590 aa12.81□□□□□ -0.36
SFR1-202ENST00000369729 ZC3H13Q5T200 1668 aaKnown RBP12.8□□□□□ -0.36
SFR1-202ENST00000369729 MLECQ14165 292 aa12.8□□□□□ -0.36
SFR1-202ENST00000369729 TIMELESSQ9UNS1 1208 aa12.8□□□□□ -0.36
SFR1-202ENST00000369729 TET3O43151 1660 aa12.8□□□□□ -0.36
SFR1-202ENST00000369729 RPRD2Q5VT52 1461 aaKnown RBP12.79□□□□□ -0.36
SFR1-202ENST00000369729 MROH1Q8NDA8 1641 aa12.79□□□□□ -0.36
SFR1-202ENST00000369729 CNTLNQ9NXG0 1405 aa12.79□□□□□ -0.36
SFR1-202ENST00000369729 ABCC3O15438 1527 aa12.78□□□□□ -0.36
SFR1-202ENST00000369729 ANKRD30BQ9BXX2 1392 aa12.78□□□□□ -0.36
SFR1-202ENST00000369729 NEUROD1Q13562 356 aa12.77□□□□□ -0.37
SFR1-202ENST00000369729 EFCAB6Q5THR3 1501 aa12.76□□□□□ -0.37
SFR1-202ENST00000369729 ARHGAP31Q2M1Z3 1444 aa12.76□□□□□ -0.37
SFR1-202ENST00000369729 CCDC144AA2RUR9 1427 aa12.75□□□□□ -0.37
SFR1-202ENST00000369729 TONSLQ96HA7 1378 aa12.75□□□□□ -0.37
SFR1-202ENST00000369729 ATF5Q9Y2D1 282 aaPredicted RBP12.74□□□□□ -0.37
SFR1-202ENST00000369729 CEP152O94986 1710 aa12.74□□□□□ -0.37
SFR1-202ENST00000369729 CAMSAP1Q5T5Y3 1602 aa12.73□□□□□ -0.37
SFR1-202ENST00000369729 SIN3AQ96ST3 1273 aa12.72□□□□□ -0.37
SFR1-202ENST00000369729 E9PCH4 1651 aa12.72□□□□□ -0.37
SFR1-202ENST00000369729 PTPRTO14522 1441 aa12.72□□□□□ -0.37
SFR1-202ENST00000369729 NPATQ14207 1427 aa12.72□□□□□ -0.37
SFR1-202ENST00000369729 SLC52A1Q9NWF4 448 aa12.71□□□□□ -0.38
SFR1-202ENST00000369729 ZMYM3Q14202 1370 aa12.71□□□□□ -0.38
SFR1-202ENST00000369729 TRPM2O94759 1503 aa12.7□□□□□ -0.38
SFR1-202ENST00000369729 SIGLEC1Q9BZZ2 1709 aa12.7□□□□□ -0.38
SFR1-202ENST00000369729 CLTCQ00610 1675 aaKnown RBP12.7□□□□□ -0.38
SFR1-202ENST00000369729 SPHKAPQ2M3C7 1700 aa12.69□□□□□ -0.38
SFR1-202ENST00000369729 MROH2AA6NES4 1674 aa12.68□□□□□ -0.38
SFR1-202ENST00000369729 STAC3Q96MF2 364 aa12.67□□□□□ -0.38
SFR1-202ENST00000369729 NOS1P29475 1434 aa12.67□□□□□ -0.38
SFR1-202ENST00000369729 PLA2R1Q13018 1463 aa12.67□□□□□ -0.38
SFR1-202ENST00000369729 FER1L4A9Z1Z3 1794 aa12.66□□□□□ -0.38
SFR1-202ENST00000369729 ERVK-7P63135 1459 aa12.65□□□□□ -0.38
SFR1-202ENST00000369729 STAG3Q9UJ98 1225 aa12.65□□□□□ -0.38
SFR1-202ENST00000369729 CHGAP10645 457 aaKnown RBP12.63□□□□□ -0.39
SFR1-202ENST00000369729 PREX1Q8TCU6 1659 aa12.63□□□□□ -0.39
SFR1-202ENST00000369729 SPATA31D1Q6ZQQ2 1576 aa12.63□□□□□ -0.39
SFR1-202ENST00000369729 TNRQ92752 1358 aa12.63□□□□□ -0.39
SFR1-202ENST00000369729 FBXO31Q5XUX0 539 aaPredicted RBP12.62□□□□□ -0.39
SFR1-202ENST00000369729 L3MBTL2Q969R5 705 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms