RNA–Protein interactions for RNA: ENST00000369604.5

PHTF1-204, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHTF1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-204ENST00000369604 C8orf34Q49A92 452 aa18.71■□□□□ 0.59
PHTF1-204ENST00000369604 PZPP20742 1482 aa18.7■□□□□ 0.58
PHTF1-204ENST00000369604 CFDP1Q9UEE9 299 aaPredicted RBP18.7■□□□□ 0.58
PHTF1-204ENST00000369604 KDM5CP41229 1560 aa18.7■□□□□ 0.58
PHTF1-204ENST00000369604 GAPVD1Q14C86 1478 aa18.69■□□□□ 0.58
PHTF1-204ENST00000369604 MBD5Q9P267 1494 aa18.69■□□□□ 0.58
PHTF1-204ENST00000369604 KDM2BQ8NHM5 1336 aa18.68■□□□□ 0.58
PHTF1-204ENST00000369604 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.67■□□□□ 0.58
PHTF1-204ENST00000369604 POGKQ9P215 609 aa18.67■□□□□ 0.58
PHTF1-204ENST00000369604 SLKQ9H2G2 1235 aaPredicted RBP18.66■□□□□ 0.58
PHTF1-204ENST00000369604 KIF14Q15058 1648 aa18.65■□□□□ 0.58
PHTF1-204ENST00000369604 NUP155O75694 1391 aa18.65■□□□□ 0.58
PHTF1-204ENST00000369604 PARD3Q8TEW0 1356 aa18.65■□□□□ 0.58
PHTF1-204ENST00000369604 RALGAPBQ86X10 1494 aa18.64■□□□□ 0.57
PHTF1-204ENST00000369604 WDR43Q15061 677 aaKnown RBP eCLIP18.62■□□□□ 0.57
PHTF1-204ENST00000369604 RGL3Q3MIN7 710 aa18.62■□□□□ 0.57
PHTF1-204ENST00000369604 ADAMTS8Q9UP79 889 aa18.62■□□□□ 0.57
PHTF1-204ENST00000369604 URB2Q14146 1524 aaKnown RBP18.61■□□□□ 0.57
PHTF1-204ENST00000369604 PANK3Q9H999 370 aa18.61■□□□□ 0.57
PHTF1-204ENST00000369604 DNMT1P26358 1616 aaKnown RBP18.61■□□□□ 0.57
PHTF1-204ENST00000369604 BECN1Q14457 450 aa18.61■□□□□ 0.57
PHTF1-204ENST00000369604 MRC2Q9UBG0 1479 aa18.6■□□□□ 0.57
PHTF1-204ENST00000369604 GLIPR1L2Q4G1C9 344 aa18.59■□□□□ 0.57
PHTF1-204ENST00000369604 PER1O15534 1290 aaPredicted RBP18.59■□□□□ 0.57
PHTF1-204ENST00000369604 L1TD1Q5T7N2 865 aaKnown RBP18.59■□□□□ 0.57
PHTF1-204ENST00000369604 NAP1L5Q96NT1 182 aaPredicted RBP18.59■□□□□ 0.57
PHTF1-204ENST00000369604 RRAGDQ9NQL2 400 aaPredicted RBP18.59■□□□□ 0.57
PHTF1-204ENST00000369604 UHRF1BP1Q6BDS2 1440 aa18.59■□□□□ 0.57
PHTF1-204ENST00000369604 ANKRD30AQ9BXX3 1397 aa18.58■□□□□ 0.57
PHTF1-204ENST00000369604 GOLGA2Q08379 1002 aa18.57■□□□□ 0.56
PHTF1-204ENST00000369604 NBPF1Q3BBV0 1214 aa18.56■□□□□ 0.56
PHTF1-204ENST00000369604 DUSP27Q5VZP5 1158 aa18.56■□□□□ 0.56
PHTF1-204ENST00000369604 ANKRD50Q9ULJ7 1429 aa18.56■□□□□ 0.56
PHTF1-204ENST00000369604 PKNOX2Q96KN3 472 aa18.53■□□□□ 0.56
PHTF1-204ENST00000369604 WDR62O43379 1518 aa18.53■□□□□ 0.56
PHTF1-204ENST00000369604 BLMP54132 1417 aaPredicted RBP18.53■□□□□ 0.56
PHTF1-204ENST00000369604 GZF1Q9H116 711 aaPredicted RBP18.52■□□□□ 0.56
PHTF1-204ENST00000369604 PNNQ9H307 717 aaKnown RBP18.52■□□□□ 0.56
PHTF1-204ENST00000369604 CANXP27824 592 aaKnown RBP18.51■□□□□ 0.55
PHTF1-204ENST00000369604 SPRYD3Q8NCJ5 442 aa18.51■□□□□ 0.55
PHTF1-204ENST00000369604 CAMSAP2Q08AD1 1489 aa18.51■□□□□ 0.55
PHTF1-204ENST00000369604 SEC24BO95487 1268 aa18.5■□□□□ 0.55
PHTF1-204ENST00000369604 PLEKHH1Q9ULM0 1364 aa18.5■□□□□ 0.55
PHTF1-204ENST00000369604 TSPY4P0CV99 314 aa18.5■□□□□ 0.55
PHTF1-204ENST00000369604 TSPY10P0CW01 314 aa18.5■□□□□ 0.55
PHTF1-204ENST00000369604 CCDC146Q8IYE0 955 aa18.5■□□□□ 0.55
PHTF1-204ENST00000369604 VSIG10Q8N0Z9 540 aa18.5■□□□□ 0.55
PHTF1-204ENST00000369604 UPF2Q9HAU5 1272 aaKnown RBP18.5■□□□□ 0.55
PHTF1-204ENST00000369604 KIAA0586Q9BVV6 1533 aa18.49■□□□□ 0.55
PHTF1-204ENST00000369604 PLEKHH2Q8IVE3 1493 aa18.49■□□□□ 0.55
PHTF1-204ENST00000369604 BCAR3O75815 825 aa18.49■□□□□ 0.55
PHTF1-204ENST00000369604 PRG4Q92954 1404 aaPredicted RBP18.49■□□□□ 0.55
PHTF1-204ENST00000369604 GOLGA6L3A6NEY3 463 aa18.48■□□□□ 0.55
PHTF1-204ENST00000369604 TMF1P82094 1093 aa18.48■□□□□ 0.55
PHTF1-204ENST00000369604 KNSTRNQ9Y448 316 aa18.48■□□□□ 0.55
PHTF1-204ENST00000369604 ZMYM4Q5VZL5 1548 aa18.48■□□□□ 0.55
PHTF1-204ENST00000369604 IQGAP2Q13576 1575 aa18.48■□□□□ 0.55
PHTF1-204ENST00000369604 IGHDP01880 384 aa18.48■□□□□ 0.55
PHTF1-204ENST00000369604 DISP3Q9P2K9 1392 aa18.46■□□□□ 0.55
PHTF1-204ENST00000369604 CHMP7Q8WUX9 453 aaPredicted RBP18.46■□□□□ 0.55
PHTF1-204ENST00000369604 ARHGEF12Q9NZN5 1544 aa18.46■□□□□ 0.54
PHTF1-204ENST00000369604 USP19O94966 1318 aa18.45■□□□□ 0.54
PHTF1-204ENST00000369604 HSP90AA1P07900 732 aaKnown RBP18.45■□□□□ 0.54
PHTF1-204ENST00000369604 SLFN5Q08AF3 891 aa18.44■□□□□ 0.54
PHTF1-204ENST00000369604 HSP90AA2PQ14568 343 aaPredicted RBP18.44■□□□□ 0.54
PHTF1-204ENST00000369604 PPP2R1AP30153 589 aa18.44■□□□□ 0.54
PHTF1-204ENST00000369604 XRCC6P12956 609 aaKnown RBP eCLIP18.43■□□□□ 0.54
PHTF1-204ENST00000369604 INSRP06213 1382 aa18.43■□□□□ 0.54
PHTF1-204ENST00000369604 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.42■□□□□ 0.54
PHTF1-204ENST00000369604 COG6Q9Y2V7 657 aa18.42■□□□□ 0.54
PHTF1-204ENST00000369604 MAPK8IP3Q9UPT6 1336 aa18.42■□□□□ 0.54
PHTF1-204ENST00000369604 PANK2Q9BZ23 570 aa18.42■□□□□ 0.54
PHTF1-204ENST00000369604 E9PCH4 1651 aa18.41■□□□□ 0.54
PHTF1-204ENST00000369604 APAF1O14727 1248 aa18.41■□□□□ 0.54
PHTF1-204ENST00000369604 TESK2Q96S53 571 aa18.41■□□□□ 0.54
PHTF1-204ENST00000369604 NUP153P49790 1475 aaKnown RBP18.4■□□□□ 0.54
PHTF1-204ENST00000369604 ZNF608Q9ULD9 1512 aaPredicted RBP18.4■□□□□ 0.54
PHTF1-204ENST00000369604 PANK1Q8TE04 598 aa18.4■□□□□ 0.54
PHTF1-204ENST00000369604 SPINK5Q9NQ38 1064 aaPredicted RBP18.4■□□□□ 0.54
PHTF1-204ENST00000369604 TROQ12816 1431 aaPredicted RBP18.39■□□□□ 0.53
PHTF1-204ENST00000369604 GPATCH8Q9UKJ3 1502 aaKnown RBP18.39■□□□□ 0.53
PHTF1-204ENST00000369604 CCDC144AA2RUR9 1427 aa18.39■□□□□ 0.53
PHTF1-204ENST00000369604 EIF3AQ14152 1382 aaKnown RBP18.38■□□□□ 0.53
PHTF1-204ENST00000369604 ERBINQ96RT1 1412 aa18.38■□□□□ 0.53
PHTF1-204ENST00000369604 CLUAP1Q96AJ1 413 aa18.38■□□□□ 0.53
PHTF1-204ENST00000369604 ZMYND15Q9H091 742 aa18.38■□□□□ 0.53
PHTF1-204ENST00000369604 TBC1D2Q9BYX2 928 aa18.38■□□□□ 0.53
PHTF1-204ENST00000369604 CGNL1Q0VF96 1302 aa18.38■□□□□ 0.53
PHTF1-204ENST00000369604 ADGRL2O95490 1459 aa18.37■□□□□ 0.53
PHTF1-204ENST00000369604 PRAG1Q86YV5 1406 aa18.37■□□□□ 0.53
PHTF1-204ENST00000369604 HNRNPMP52272 730 aaKnown RBP eCLIP18.37■□□□□ 0.53
PHTF1-204ENST00000369604 ZNF521Q96K83 1311 aa18.36■□□□□ 0.53
PHTF1-204ENST00000369604 ANTXR1Q9H6X2 564 aa18.36■□□□□ 0.53
PHTF1-204ENST00000369604 COL17A1Q9UMD9 1497 aaPredicted RBP18.36■□□□□ 0.53
PHTF1-204ENST00000369604 C9orf84Q5VXU9 1444 aa18.36■□□□□ 0.53
PHTF1-204ENST00000369604 MCM4P33991 863 aa18.36■□□□□ 0.53
PHTF1-204ENST00000369604 CLCN1P35523 988 aa18.35■□□□□ 0.53
PHTF1-204ENST00000369604 ADGBQ8N7X0 1667 aa18.35■□□□□ 0.53
PHTF1-204ENST00000369604 E9PSI1 815 aa18.34■□□□□ 0.53
PHTF1-204ENST00000369604 CENPJQ9HC77 1338 aaPredicted RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms