RNA–Protein interactions for RNA: ENST00000369600.5

PHTF1-203, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 5 BASIC

Gene PHTF1, Length 3,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-203ENST00000369600 PBRM1Q86U86 1689 aa18.92■□□□□ 0.62
PHTF1-203ENST00000369600 PLB1Q6P1J6 1458 aa18.92■□□□□ 0.62
PHTF1-203ENST00000369600 KIF14Q15058 1648 aa18.91■□□□□ 0.62
PHTF1-203ENST00000369600 C20orf194Q5TEA3 1177 aa18.91■□□□□ 0.62
PHTF1-203ENST00000369600 DAXXQ9UER7 740 aaPredicted RBP18.91■□□□□ 0.62
PHTF1-203ENST00000369600 TROQ12816 1431 aaPredicted RBP18.9■□□□□ 0.62
PHTF1-203ENST00000369600 ADAMTS12P58397 1594 aa18.9■□□□□ 0.62
PHTF1-203ENST00000369600 GPATCH8Q9UKJ3 1502 aaKnown RBP18.89■□□□□ 0.62
PHTF1-203ENST00000369600 CHMP7Q8WUX9 453 aaPredicted RBP18.89■□□□□ 0.61
PHTF1-203ENST00000369600 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.89■□□□□ 0.61
PHTF1-203ENST00000369600 DISP1Q96F81 1524 aa18.89■□□□□ 0.61
PHTF1-203ENST00000369600 PLEKHD1A6NEE1 506 aa18.88■□□□□ 0.61
PHTF1-203ENST00000369600 RALGAPBQ86X10 1494 aa18.88■□□□□ 0.61
PHTF1-203ENST00000369600 PANK3Q9H999 370 aa18.87■□□□□ 0.61
PHTF1-203ENST00000369600 RAPGEF6Q8TEU7 1601 aa18.86■□□□□ 0.61
PHTF1-203ENST00000369600 KIAA0586Q9BVV6 1533 aa18.85■□□□□ 0.61
PHTF1-203ENST00000369600 KIAA0556O60303 1618 aa18.85■□□□□ 0.61
PHTF1-203ENST00000369600 IFT140Q96RY7 1462 aa18.85■□□□□ 0.61
PHTF1-203ENST00000369600 RGS3P49796 1198 aa18.85■□□□□ 0.61
PHTF1-203ENST00000369600 PDE3BQ13370 1112 aa18.85■□□□□ 0.61
PHTF1-203ENST00000369600 ERCC6Q03468 1493 aa18.84■□□□□ 0.61
PHTF1-203ENST00000369600 PPM1GO15355 546 aaPredicted RBP18.84■□□□□ 0.61
PHTF1-203ENST00000369600 MS4A1P11836 297 aa18.83■□□□□ 0.61
PHTF1-203ENST00000369600 C9orf84Q5VXU9 1444 aa18.83■□□□□ 0.6
PHTF1-203ENST00000369600 BRPF3Q9ULD4 1205 aa18.81■□□□□ 0.6
PHTF1-203ENST00000369600 UHRF1BP1Q6BDS2 1440 aa18.81■□□□□ 0.6
PHTF1-203ENST00000369600 ADAMTS8Q9UP79 889 aa18.8■□□□□ 0.6
PHTF1-203ENST00000369600 PER1O15534 1290 aaPredicted RBP18.8■□□□□ 0.6
PHTF1-203ENST00000369600 PARD3Q8TEW0 1356 aa18.79■□□□□ 0.6
PHTF1-203ENST00000369600 DDRGK1Q96HY6 314 aa18.78■□□□□ 0.6
PHTF1-203ENST00000369600 DISP3Q9P2K9 1392 aa18.78■□□□□ 0.6
PHTF1-203ENST00000369600 ADGBQ8N7X0 1667 aa18.78■□□□□ 0.6
PHTF1-203ENST00000369600 WDR43Q15061 677 aaKnown RBP eCLIP18.77■□□□□ 0.6
PHTF1-203ENST00000369600 NFKBIBQ15653 356 aa18.77■□□□□ 0.6
PHTF1-203ENST00000369600 USP35Q9P2H5 1018 aa18.77■□□□□ 0.6
PHTF1-203ENST00000369600 JPH4Q96JJ6 628 aa18.76■□□□□ 0.59
PHTF1-203ENST00000369600 CCDC144AA2RUR9 1427 aa18.76■□□□□ 0.59
PHTF1-203ENST00000369600 PRKCSHP14314 528 aaPredicted RBP18.75■□□□□ 0.59
PHTF1-203ENST00000369600 CCDC146Q8IYE0 955 aa18.75■□□□□ 0.59
PHTF1-203ENST00000369600 ADGRL2O95490 1459 aa18.75■□□□□ 0.59
PHTF1-203ENST00000369600 ITSN2Q9NZM3 1697 aa18.74■□□□□ 0.59
PHTF1-203ENST00000369600 TMF1P82094 1093 aa18.72■□□□□ 0.59
PHTF1-203ENST00000369600 GSE1Q14687 1217 aa18.72■□□□□ 0.59
PHTF1-203ENST00000369600 GRIN2AQ12879 1464 aa18.72■□□□□ 0.59
PHTF1-203ENST00000369600 EIF4G3O43432 1585 aaKnown RBP18.71■□□□□ 0.59
PHTF1-203ENST00000369600 FRAT1Q92837 279 aaPredicted RBP18.71■□□□□ 0.59
PHTF1-203ENST00000369600 KNSTRNQ9Y448 316 aa18.71■□□□□ 0.59
PHTF1-203ENST00000369600 ARHGEF12Q9NZN5 1544 aa18.71■□□□□ 0.59
PHTF1-203ENST00000369600 TESK2Q96S53 571 aa18.7■□□□□ 0.58
PHTF1-203ENST00000369600 PRAG1Q86YV5 1406 aa18.69■□□□□ 0.58
PHTF1-203ENST00000369600 FRAT2O75474 233 aaPredicted RBP18.67■□□□□ 0.58
PHTF1-203ENST00000369600 CROCC2H7BZ55 1655 aa18.67■□□□□ 0.58
PHTF1-203ENST00000369600 EIF5BO60841 1220 aaKnown RBP18.67■□□□□ 0.58
PHTF1-203ENST00000369600 FAM161AQ3B820 660 aa18.67■□□□□ 0.58
PHTF1-203ENST00000369600 CENPQQ7L2Z9 268 aaPredicted RBP18.67■□□□□ 0.58
PHTF1-203ENST00000369600 PLEKHH1Q9ULM0 1364 aa18.66■□□□□ 0.58
PHTF1-203ENST00000369600 CARMIL2Q6F5E8 1435 aa18.66■□□□□ 0.58
PHTF1-203ENST00000369600 GOLGA2Q08379 1002 aa18.66■□□□□ 0.58
PHTF1-203ENST00000369600 DUSP27Q5VZP5 1158 aa18.65■□□□□ 0.58
PHTF1-203ENST00000369600 ERBINQ96RT1 1412 aa18.65■□□□□ 0.58
PHTF1-203ENST00000369600 PPP2R1AP30153 589 aa18.64■□□□□ 0.57
PHTF1-203ENST00000369600 MAGI1Q96QZ7 1491 aaPredicted RBP18.64■□□□□ 0.57
PHTF1-203ENST00000369600 WASHC2CQ9Y4E1 1318 aa18.64■□□□□ 0.57
PHTF1-203ENST00000369600 C8orf34Q49A92 452 aa18.63■□□□□ 0.57
PHTF1-203ENST00000369600 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.63■□□□□ 0.57
PHTF1-203ENST00000369600 ARXQ96QS3 562 aa18.63■□□□□ 0.57
PHTF1-203ENST00000369600 E9PCH4 1651 aa18.63■□□□□ 0.57
PHTF1-203ENST00000369600 BCAR3O75815 825 aa18.63■□□□□ 0.57
PHTF1-203ENST00000369600 CEP170Q5SW79 1584 aa18.63■□□□□ 0.57
PHTF1-203ENST00000369600 KDM2BQ8NHM5 1336 aa18.63■□□□□ 0.57
PHTF1-203ENST00000369600 FAM135AQ9P2D6 1515 aa18.63■□□□□ 0.57
PHTF1-203ENST00000369600 KDM5DQ9BY66 1539 aa18.62■□□□□ 0.57
PHTF1-203ENST00000369600 CDC42BPAQ5VT25 1732 aa18.61■□□□□ 0.57
PHTF1-203ENST00000369600 APAF1O14727 1248 aa18.61■□□□□ 0.57
PHTF1-203ENST00000369600 CANXP27824 592 aaKnown RBP18.61■□□□□ 0.57
PHTF1-203ENST00000369600 BLMP54132 1417 aaPredicted RBP18.61■□□□□ 0.57
PHTF1-203ENST00000369600 COL17A1Q9UMD9 1497 aaPredicted RBP18.61■□□□□ 0.57
PHTF1-203ENST00000369600 SPINK5Q9NQ38 1064 aaPredicted RBP18.6■□□□□ 0.57
PHTF1-203ENST00000369600 ATP10BO94823 1461 aa18.6■□□□□ 0.57
PHTF1-203ENST00000369600 A2MP01023 1474 aa18.6■□□□□ 0.57
PHTF1-203ENST00000369600 NEUROD2Q15784 382 aa18.6■□□□□ 0.57
PHTF1-203ENST00000369600 SLKQ9H2G2 1235 aaPredicted RBP18.58■□□□□ 0.57
PHTF1-203ENST00000369600 TRPM1Q7Z4N2 1603 aa18.57■□□□□ 0.56
PHTF1-203ENST00000369600 SYNJ2O15056 1496 aa18.57■□□□□ 0.56
PHTF1-203ENST00000369600 ZMYM4Q5VZL5 1548 aa18.57■□□□□ 0.56
PHTF1-203ENST00000369600 ABCC10Q5T3U5 1492 aa18.56■□□□□ 0.56
PHTF1-203ENST00000369600 SHANK2Q9UPX8 1470 aa18.55■□□□□ 0.56
PHTF1-203ENST00000369600 PTPRGP23470 1445 aa18.55■□□□□ 0.56
PHTF1-203ENST00000369600 TNNT2P45379 298 aaPredicted RBP18.55■□□□□ 0.56
PHTF1-203ENST00000369600 PLA2R1Q13018 1463 aa18.54■□□□□ 0.56
PHTF1-203ENST00000369600 COG6Q9Y2V7 657 aa18.53■□□□□ 0.56
PHTF1-203ENST00000369600 ADCY10Q96PN6 1610 aa18.53■□□□□ 0.56
PHTF1-203ENST00000369600 IGHDP01880 384 aa18.53■□□□□ 0.56
PHTF1-203ENST00000369600 SLFN5Q08AF3 891 aa18.53■□□□□ 0.56
PHTF1-203ENST00000369600 DMRT2Q9Y5R5 561 aa18.53■□□□□ 0.56
PHTF1-203ENST00000369600 CCDC141Q6ZP82 1450 aa18.53■□□□□ 0.56
PHTF1-203ENST00000369600 PANK1Q8TE04 598 aa18.53■□□□□ 0.56
PHTF1-203ENST00000369600 AMER1Q5JTC6 1135 aaPredicted RBP18.52■□□□□ 0.56
PHTF1-203ENST00000369600 PLEKHH2Q8IVE3 1493 aa18.52■□□□□ 0.56
PHTF1-203ENST00000369600 MAGI2Q86UL8 1455 aa18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms