RNA–Protein interactions for RNA: ENST00000369559.8

HIPK1-206, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 3,424 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-206ENST00000369559 RSPH6AQ9H0K4 717 aa13.21□□□□□ -0.29
HIPK1-206ENST00000369559 CRBNQ96SW2 442 aa13.21□□□□□ -0.3
HIPK1-206ENST00000369559 E9PCH4 1651 aa13.21□□□□□ -0.3
HIPK1-206ENST00000369559 PLIN1O60240 522 aa13.2□□□□□ -0.3
HIPK1-206ENST00000369559 FAM43AQ8N2R8 423 aa13.2□□□□□ -0.3
HIPK1-206ENST00000369559 KIAA1107Q9UPP5 1409 aa13.2□□□□□ -0.3
HIPK1-206ENST00000369559 CDCA7LQ96GN5 454 aa13.2□□□□□ -0.3
HIPK1-206ENST00000369559 UHRF1BP1Q6BDS2 1440 aa13.2□□□□□ -0.3
HIPK1-206ENST00000369559 CEP170Q5SW79 1584 aa13.2□□□□□ -0.3
HIPK1-206ENST00000369559 NLRP13Q86W25 1043 aa13.19□□□□□ -0.3
HIPK1-206ENST00000369559 NUP160Q12769 1436 aa13.18□□□□□ -0.3
HIPK1-206ENST00000369559 CARD11Q9BXL7 1154 aa13.18□□□□□ -0.3
HIPK1-206ENST00000369559 KDM2BQ8NHM5 1336 aa13.17□□□□□ -0.3
HIPK1-206ENST00000369559 PARD3Q8TEW0 1356 aa13.17□□□□□ -0.3
HIPK1-206ENST00000369559 FRAT2O75474 233 aaPredicted RBP13.16□□□□□ -0.3
HIPK1-206ENST00000369559 FAM161AQ3B820 660 aa13.16□□□□□ -0.3
HIPK1-206ENST00000369559 KIAA0586Q9BVV6 1533 aa13.16□□□□□ -0.3
HIPK1-206ENST00000369559 ZNF644Q9H582 1327 aaPredicted RBP13.15□□□□□ -0.3
HIPK1-206ENST00000369559 ST20-MTHFSA0A0A6YYL1 179 aa13.15□□□□□ -0.3
HIPK1-206ENST00000369559 JPH4Q96JJ6 628 aa13.15□□□□□ -0.3
HIPK1-206ENST00000369559 C8orf34Q49A92 452 aa13.14□□□□□ -0.31
HIPK1-206ENST00000369559 CENPQQ7L2Z9 268 aaPredicted RBP13.14□□□□□ -0.31
HIPK1-206ENST00000369559 INSRP06213 1382 aa13.14□□□□□ -0.31
HIPK1-206ENST00000369559 ARHGEF12Q9NZN5 1544 aa13.14□□□□□ -0.31
HIPK1-206ENST00000369559 PKD2Q13563 968 aa13.14□□□□□ -0.31
HIPK1-206ENST00000369559 DCAF11Q8TEB1 546 aa13.14□□□□□ -0.31
HIPK1-206ENST00000369559 ZMYM4Q5VZL5 1548 aa13.13□□□□□ -0.31
HIPK1-206ENST00000369559 BLMP54132 1417 aaPredicted RBP13.13□□□□□ -0.31
HIPK1-206ENST00000369559 ADGBQ8N7X0 1667 aa13.13□□□□□ -0.31
HIPK1-206ENST00000369559 ARID3CA6NKF2 412 aa13.13□□□□□ -0.31
HIPK1-206ENST00000369559 IQGAP2Q13576 1575 aa13.12□□□□□ -0.31
HIPK1-206ENST00000369559 PLEKHH2Q8IVE3 1493 aa13.12□□□□□ -0.31
HIPK1-206ENST00000369559 C20orf194Q5TEA3 1177 aa13.11□□□□□ -0.31
HIPK1-206ENST00000369559 CLASP1Q7Z460 1538 aa13.08□□□□□ -0.32
HIPK1-206ENST00000369559 ADGRL2O95490 1459 aa13.08□□□□□ -0.32
HIPK1-206ENST00000369559 CAMSAP2Q08AD1 1489 aa13.07□□□□□ -0.32
HIPK1-206ENST00000369559 PER1O15534 1290 aaPredicted RBP13.07□□□□□ -0.32
HIPK1-206ENST00000369559 PRG4Q92954 1404 aaPredicted RBP13.07□□□□□ -0.32
HIPK1-206ENST00000369559 KDM2AQ9Y2K7 1162 aa13.06□□□□□ -0.32
HIPK1-206ENST00000369559 CROCC2H7BZ55 1655 aa13.05□□□□□ -0.32
HIPK1-206ENST00000369559 RGS3P49796 1198 aa13.04□□□□□ -0.32
HIPK1-206ENST00000369559 ANKRD30AQ9BXX3 1397 aa13.04□□□□□ -0.32
HIPK1-206ENST00000369559 POGKQ9P215 609 aa13.04□□□□□ -0.32
HIPK1-206ENST00000369559 ANKRD50Q9ULJ7 1429 aa13.03□□□□□ -0.32
HIPK1-206ENST00000369559 VIRMAQ69YN4 1812 aaKnown RBP13.03□□□□□ -0.32
HIPK1-206ENST00000369559 ITSN2Q9NZM3 1697 aa13.03□□□□□ -0.32
HIPK1-206ENST00000369559 CC2D1BQ5T0F9 858 aaKnown RBP13.03□□□□□ -0.32
HIPK1-206ENST00000369559 RRAGDQ9NQL2 400 aaPredicted RBP13.03□□□□□ -0.32
HIPK1-206ENST00000369559 CARMIL2Q6F5E8 1435 aa13.03□□□□□ -0.32
HIPK1-206ENST00000369559 L1TD1Q5T7N2 865 aaKnown RBP13.03□□□□□ -0.32
HIPK1-206ENST00000369559 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.03□□□□□ -0.32
HIPK1-206ENST00000369559 DISP1Q96F81 1524 aa13.03□□□□□ -0.32
HIPK1-206ENST00000369559 CFDP1Q9UEE9 299 aaPredicted RBP13.02□□□□□ -0.32
HIPK1-206ENST00000369559 ERCC6L2Q5T890 1561 aa13.02□□□□□ -0.32
HIPK1-206ENST00000369559 NUP153P49790 1475 aaKnown RBP13.02□□□□□ -0.33
HIPK1-206ENST00000369559 DUSP27Q5VZP5 1158 aa13.01□□□□□ -0.33
HIPK1-206ENST00000369559 NUP155O75694 1391 aa13.01□□□□□ -0.33
HIPK1-206ENST00000369559 TRPM1Q7Z4N2 1603 aa13□□□□□ -0.33
HIPK1-206ENST00000369559 GLIPR1L2Q4G1C9 344 aa13□□□□□ -0.33
HIPK1-206ENST00000369559 COL17A1Q9UMD9 1497 aaPredicted RBP13□□□□□ -0.33
HIPK1-206ENST00000369559 SHROOM2Q13796 1616 aa12.99□□□□□ -0.33
HIPK1-206ENST00000369559 USP19O94966 1318 aa12.99□□□□□ -0.33
HIPK1-206ENST00000369559 PKNOX2Q96KN3 472 aa12.99□□□□□ -0.33
HIPK1-206ENST00000369559 KDM5DQ9BY66 1539 aa12.99□□□□□ -0.33
HIPK1-206ENST00000369559 ADAMTS8Q9UP79 889 aa12.99□□□□□ -0.33
HIPK1-206ENST00000369559 KIAA0556O60303 1618 aa12.99□□□□□ -0.33
HIPK1-206ENST00000369559 PLEKHH1Q9ULM0 1364 aa12.99□□□□□ -0.33
HIPK1-206ENST00000369559 BECN1Q14457 450 aa12.98□□□□□ -0.33
HIPK1-206ENST00000369559 RAPGEF6Q8TEU7 1601 aa12.98□□□□□ -0.33
HIPK1-206ENST00000369559 GPATCH8Q9UKJ3 1502 aaKnown RBP12.98□□□□□ -0.33
HIPK1-206ENST00000369559 TROQ12816 1431 aaPredicted RBP12.98□□□□□ -0.33
HIPK1-206ENST00000369559 PRAG1Q86YV5 1406 aa12.97□□□□□ -0.33
HIPK1-206ENST00000369559 PANK3Q9H999 370 aa12.97□□□□□ -0.33
HIPK1-206ENST00000369559 ZNF777Q9ULD5 760 aaPredicted RBP12.97□□□□□ -0.33
HIPK1-206ENST00000369559 EIF3AQ14152 1382 aaKnown RBP12.97□□□□□ -0.33
HIPK1-206ENST00000369559 ZNF521Q96K83 1311 aa12.97□□□□□ -0.33
HIPK1-206ENST00000369559 GOLGA2Q08379 1002 aa12.97□□□□□ -0.33
HIPK1-206ENST00000369559 PTPRGP23470 1445 aa12.96□□□□□ -0.33
HIPK1-206ENST00000369559 DISP3Q9P2K9 1392 aa12.96□□□□□ -0.34
HIPK1-206ENST00000369559 SLKQ9H2G2 1235 aaPredicted RBP12.95□□□□□ -0.34
HIPK1-206ENST00000369559 GPRASP1Q5JY77 1395 aa12.94□□□□□ -0.34
HIPK1-206ENST00000369559 LAMC1P11047 1609 aa12.94□□□□□ -0.34
HIPK1-206ENST00000369559 WDR43Q15061 677 aaKnown RBP eCLIP12.94□□□□□ -0.34
HIPK1-206ENST00000369559 TESK2Q96S53 571 aa12.94□□□□□ -0.34
HIPK1-206ENST00000369559 ADCY10Q96PN6 1610 aa12.93□□□□□ -0.34
HIPK1-206ENST00000369559 NBPF1Q3BBV0 1214 aa12.93□□□□□ -0.34
HIPK1-206ENST00000369559 CYB5RLQ6IPT4 315 aa12.93□□□□□ -0.34
HIPK1-206ENST00000369559 ANTXR1Q9H6X2 564 aa12.93□□□□□ -0.34
HIPK1-206ENST00000369559 SHANK2Q9UPX8 1470 aa12.93□□□□□ -0.34
HIPK1-206ENST00000369559 PRDM15P57071 1507 aaPredicted RBP12.93□□□□□ -0.34
HIPK1-206ENST00000369559 SEC24BO95487 1268 aa12.93□□□□□ -0.34
HIPK1-206ENST00000369559 SLFN5Q08AF3 891 aa12.93□□□□□ -0.34
HIPK1-206ENST00000369559 ERBINQ96RT1 1412 aa12.92□□□□□ -0.34
HIPK1-206ENST00000369559 MAPK8IP3Q9UPT6 1336 aa12.92□□□□□ -0.34
HIPK1-206ENST00000369559 NLRP1Q9C000 1473 aa12.92□□□□□ -0.34
HIPK1-206ENST00000369559 NAP1L5Q96NT1 182 aaPredicted RBP12.92□□□□□ -0.34
HIPK1-206ENST00000369559 PNNQ9H307 717 aaKnown RBP12.92□□□□□ -0.34
HIPK1-206ENST00000369559 C9orf84Q5VXU9 1444 aa12.92□□□□□ -0.34
HIPK1-206ENST00000369559 CLCN1P35523 988 aa12.91□□□□□ -0.34
HIPK1-206ENST00000369559 IGHDP01880 384 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms