RNA–Protein interactions for RNA: ENST00000369522.7

SYCP1-202, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP1, Length 3,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-202ENST00000369522 CDC42BPAQ5VT25 1732 aa10.3□□□□□ -0.76
SYCP1-202ENST00000369522 PPM1GO15355 546 aaPredicted RBP10.3□□□□□ -0.76
SYCP1-202ENST00000369522 TRPM1Q7Z4N2 1603 aa10.29□□□□□ -0.76
SYCP1-202ENST00000369522 CDCA7LQ96GN5 454 aa10.29□□□□□ -0.76
SYCP1-202ENST00000369522 ST20-MTHFSA0A0A6YYL1 179 aa10.29□□□□□ -0.76
SYCP1-202ENST00000369522 CARD11Q9BXL7 1154 aa10.29□□□□□ -0.76
SYCP1-202ENST00000369522 BLMP54132 1417 aaPredicted RBP10.28□□□□□ -0.76
SYCP1-202ENST00000369522 KDM5DQ9BY66 1539 aa10.28□□□□□ -0.76
SYCP1-202ENST00000369522 GPATCH8Q9UKJ3 1502 aaKnown RBP10.28□□□□□ -0.76
SYCP1-202ENST00000369522 PDE3BQ13370 1112 aa10.28□□□□□ -0.76
SYCP1-202ENST00000369522 ZNF608Q9ULD9 1512 aaPredicted RBP10.28□□□□□ -0.76
SYCP1-202ENST00000369522 PRG4Q92954 1404 aaPredicted RBP10.28□□□□□ -0.76
SYCP1-202ENST00000369522 PLIN1O60240 522 aa10.27□□□□□ -0.77
SYCP1-202ENST00000369522 ZMYM4Q5VZL5 1548 aa10.27□□□□□ -0.77
SYCP1-202ENST00000369522 TROQ12816 1431 aaPredicted RBP10.26□□□□□ -0.77
SYCP1-202ENST00000369522 CRBNQ96SW2 442 aa10.26□□□□□ -0.77
SYCP1-202ENST00000369522 NLRP13Q86W25 1043 aa10.26□□□□□ -0.77
SYCP1-202ENST00000369522 ARXQ96QS3 562 aa10.26□□□□□ -0.77
SYCP1-202ENST00000369522 ANKRD50Q9ULJ7 1429 aa10.26□□□□□ -0.77
SYCP1-202ENST00000369522 GSE1Q14687 1217 aa10.25□□□□□ -0.77
SYCP1-202ENST00000369522 KDM2BQ8NHM5 1336 aa10.25□□□□□ -0.77
SYCP1-202ENST00000369522 NFKBIBQ15653 356 aa10.25□□□□□ -0.77
SYCP1-202ENST00000369522 DDRGK1Q96HY6 314 aa10.25□□□□□ -0.77
SYCP1-202ENST00000369522 INSRP06213 1382 aa10.25□□□□□ -0.77
SYCP1-202ENST00000369522 PER1O15534 1290 aaPredicted RBP10.24□□□□□ -0.77
SYCP1-202ENST00000369522 PDS5BQ9NTI5 1447 aa10.24□□□□□ -0.77
SYCP1-202ENST00000369522 VIRMAQ69YN4 1812 aaKnown RBP10.24□□□□□ -0.77
SYCP1-202ENST00000369522 ANKRD30AQ9BXX3 1397 aa10.24□□□□□ -0.77
SYCP1-202ENST00000369522 PTPRGP23470 1445 aa10.23□□□□□ -0.77
SYCP1-202ENST00000369522 C20orf194Q5TEA3 1177 aa10.23□□□□□ -0.77
SYCP1-202ENST00000369522 CFDP1Q9UEE9 299 aaPredicted RBP10.23□□□□□ -0.77
SYCP1-202ENST00000369522 LAMC1P11047 1609 aa10.23□□□□□ -0.77
SYCP1-202ENST00000369522 SHANK2Q9UPX8 1470 aa10.23□□□□□ -0.77
SYCP1-202ENST00000369522 EIF4G3O43432 1585 aaKnown RBP10.22□□□□□ -0.77
SYCP1-202ENST00000369522 FRAT1Q92837 279 aaPredicted RBP10.22□□□□□ -0.77
SYCP1-202ENST00000369522 PLEKHH2Q8IVE3 1493 aa10.22□□□□□ -0.77
SYCP1-202ENST00000369522 COL17A1Q9UMD9 1497 aaPredicted RBP10.22□□□□□ -0.77
SYCP1-202ENST00000369522 MYO5CQ9NQX4 1742 aa10.22□□□□□ -0.77
SYCP1-202ENST00000369522 NUP155O75694 1391 aa10.22□□□□□ -0.77
SYCP1-202ENST00000369522 KDM2AQ9Y2K7 1162 aa10.21□□□□□ -0.77
SYCP1-202ENST00000369522 PRAG1Q86YV5 1406 aa10.21□□□□□ -0.77
SYCP1-202ENST00000369522 PRDM15P57071 1507 aaPredicted RBP10.21□□□□□ -0.78
SYCP1-202ENST00000369522 C8orf34Q49A92 452 aa10.2□□□□□ -0.78
SYCP1-202ENST00000369522 DCAF11Q8TEB1 546 aa10.2□□□□□ -0.78
SYCP1-202ENST00000369522 C9orf84Q5VXU9 1444 aa10.2□□□□□ -0.78
SYCP1-202ENST00000369522 PLB1Q6P1J6 1458 aa10.2□□□□□ -0.78
SYCP1-202ENST00000369522 ZNF777Q9ULD5 760 aaPredicted RBP10.19□□□□□ -0.78
SYCP1-202ENST00000369522 DISP3Q9P2K9 1392 aa10.19□□□□□ -0.78
SYCP1-202ENST00000369522 GPRASP1Q5JY77 1395 aa10.18□□□□□ -0.78
SYCP1-202ENST00000369522 ABCC10Q5T3U5 1492 aa10.18□□□□□ -0.78
SYCP1-202ENST00000369522 UBE2Q2Q8WVN8 375 aa10.17□□□□□ -0.78
SYCP1-202ENST00000369522 FAM135AQ9P2D6 1515 aa10.17□□□□□ -0.78
SYCP1-202ENST00000369522 CENPQQ7L2Z9 268 aaPredicted RBP10.17□□□□□ -0.78
SYCP1-202ENST00000369522 FAM161AQ3B820 660 aa10.16□□□□□ -0.78
SYCP1-202ENST00000369522 CC2D1BQ5T0F9 858 aaKnown RBP10.16□□□□□ -0.78
SYCP1-202ENST00000369522 PLEKHH1Q9ULM0 1364 aa10.16□□□□□ -0.78
SYCP1-202ENST00000369522 RGS3P49796 1198 aa10.16□□□□□ -0.78
SYCP1-202ENST00000369522 TESK2Q96S53 571 aa10.16□□□□□ -0.78
SYCP1-202ENST00000369522 A2MP01023 1474 aa10.16□□□□□ -0.78
SYCP1-202ENST00000369522 NBPF1Q3BBV0 1214 aa10.16□□□□□ -0.78
SYCP1-202ENST00000369522 GRIN2AQ12879 1464 aa10.16□□□□□ -0.78
SYCP1-202ENST00000369522 CLASP1Q7Z460 1538 aa10.15□□□□□ -0.78
SYCP1-202ENST00000369522 RNF17Q9BXT8 1623 aaKnown RBP10.15□□□□□ -0.78
SYCP1-202ENST00000369522 FRAT2O75474 233 aaPredicted RBP10.15□□□□□ -0.78
SYCP1-202ENST00000369522 ARHGEF5Q12774 1597 aa10.15□□□□□ -0.78
SYCP1-202ENST00000369522 DUSP27Q5VZP5 1158 aa10.15□□□□□ -0.79
SYCP1-202ENST00000369522 ZNF521Q96K83 1311 aa10.15□□□□□ -0.79
SYCP1-202ENST00000369522 ABCA8O94911 1581 aa10.14□□□□□ -0.79
SYCP1-202ENST00000369522 PLA2R1Q13018 1463 aa10.14□□□□□ -0.79
SYCP1-202ENST00000369522 ERBINQ96RT1 1412 aa10.14□□□□□ -0.79
SYCP1-202ENST00000369522 PANK3Q9H999 370 aa10.13□□□□□ -0.79
SYCP1-202ENST00000369522 DNAJC5BQ9UF47 199 aa10.13□□□□□ -0.79
SYCP1-202ENST00000369522 EIF2AK4Q9P2K8 1649 aaKnown RBP10.13□□□□□ -0.79
SYCP1-202ENST00000369522 UNC13BO14795 1591 aa10.13□□□□□ -0.79
SYCP1-202ENST00000369522 ADAMTS8Q9UP79 889 aa10.13□□□□□ -0.79
SYCP1-202ENST00000369522 SYNJ2O15056 1496 aa10.12□□□□□ -0.79
SYCP1-202ENST00000369522 MAGI2Q86UL8 1455 aa10.12□□□□□ -0.79
SYCP1-202ENST00000369522 MRC2Q9UBG0 1479 aa10.12□□□□□ -0.79
SYCP1-202ENST00000369522 CDC42BPBQ9Y5S2 1711 aa10.12□□□□□ -0.79
SYCP1-202ENST00000369522 CCDC144AA2RUR9 1427 aa10.11□□□□□ -0.79
SYCP1-202ENST00000369522 WDR7Q9Y4E6 1490 aa10.11□□□□□ -0.79
SYCP1-202ENST00000369522 USP19O94966 1318 aa10.11□□□□□ -0.79
SYCP1-202ENST00000369522 SAMD9LQ8IVG5 1584 aa10.11□□□□□ -0.79
SYCP1-202ENST00000369522 IQGAP1P46940 1657 aa10.1□□□□□ -0.79
SYCP1-202ENST00000369522 MYOM1P52179 1685 aa10.1□□□□□ -0.79
SYCP1-202ENST00000369522 MAGI1Q96QZ7 1491 aaPredicted RBP10.1□□□□□ -0.79
SYCP1-202ENST00000369522 CCDC141Q6ZP82 1450 aa10.1□□□□□ -0.79
SYCP1-202ENST00000369522 IFT140Q96RY7 1462 aa10.1□□□□□ -0.79
SYCP1-202ENST00000369522 NLRP1Q9C000 1473 aa10.1□□□□□ -0.79
SYCP1-202ENST00000369522 FAM43AQ8N2R8 423 aa10.1□□□□□ -0.79
SYCP1-202ENST00000369522 IQGAP3Q86VI3 1631 aa10.09□□□□□ -0.79
SYCP1-202ENST00000369522 EIF3AQ14152 1382 aaKnown RBP10.09□□□□□ -0.79
SYCP1-202ENST00000369522 SLKQ9H2G2 1235 aaPredicted RBP10.08□□□□□ -0.8
SYCP1-202ENST00000369522 PREX2Q70Z35 1606 aa10.08□□□□□ -0.8
SYCP1-202ENST00000369522 TRMT2AQ8IZ69 625 aaKnown RBP10.08□□□□□ -0.8
SYCP1-202ENST00000369522 ATP10BO94823 1461 aa10.08□□□□□ -0.8
SYCP1-202ENST00000369522 SYNMO15061 1565 aa10.08□□□□□ -0.8
SYCP1-202ENST00000369522 PPP2R1AP30153 589 aa10.08□□□□□ -0.8
SYCP1-202ENST00000369522 SLFN5Q08AF3 891 aa10.07□□□□□ -0.8
SYCP1-202ENST00000369522 RGL3Q3MIN7 710 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms