RNA–Protein interactions for RNA: ENST00000369258.8

CHD1L-202, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1L, Length 2,967 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-202ENST00000369258 PANK3Q9H999 370 aa17.14■□□□□ 0.33
CHD1L-202ENST00000369258 KIAA0586Q9BVV6 1533 aa17.14■□□□□ 0.33
CHD1L-202ENST00000369258 TROQ12816 1431 aaPredicted RBP17.14■□□□□ 0.33
CHD1L-202ENST00000369258 KIAA0556O60303 1618 aa17.14■□□□□ 0.33
CHD1L-202ENST00000369258 NEFMP07197 916 aa17.13■□□□□ 0.33
CHD1L-202ENST00000369258 RAPGEF6Q8TEU7 1601 aa17.12■□□□□ 0.33
CHD1L-202ENST00000369258 RALBP1Q15311 655 aa17.11■□□□□ 0.33
CHD1L-202ENST00000369258 BRD4O60885 1362 aaPredicted RBP17.1■□□□□ 0.33
CHD1L-202ENST00000369258 DISP3Q9P2K9 1392 aa17.1■□□□□ 0.33
CHD1L-202ENST00000369258 ANO8Q9HCE9 1232 aaPredicted RBP17.1■□□□□ 0.33
CHD1L-202ENST00000369258 LRPPRCP42704 1394 aaKnown RBP17.09■□□□□ 0.33
CHD1L-202ENST00000369258 TCERG1O14776 1098 aaKnown RBP17.09■□□□□ 0.33
CHD1L-202ENST00000369258 CCDC146Q8IYE0 955 aa17.09■□□□□ 0.33
CHD1L-202ENST00000369258 ADAMTS8Q9UP79 889 aa17.09■□□□□ 0.33
CHD1L-202ENST00000369258 C9orf84Q5VXU9 1444 aa17.09■□□□□ 0.33
CHD1L-202ENST00000369258 PER1O15534 1290 aaPredicted RBP17.08■□□□□ 0.33
CHD1L-202ENST00000369258 NLRP13Q86W25 1043 aa17.08■□□□□ 0.33
CHD1L-202ENST00000369258 SENP3Q9H4L4 574 aaPredicted RBP17.07■□□□□ 0.32
CHD1L-202ENST00000369258 RALGAPBQ86X10 1494 aa17.06■□□□□ 0.32
CHD1L-202ENST00000369258 RGS3P49796 1198 aa17.06■□□□□ 0.32
CHD1L-202ENST00000369258 BACH2Q9BYV9 841 aa17.06■□□□□ 0.32
CHD1L-202ENST00000369258 UHRF1BP1Q6BDS2 1440 aa17.06■□□□□ 0.32
CHD1L-202ENST00000369258 GRIN2AQ12879 1464 aa17.06■□□□□ 0.32
CHD1L-202ENST00000369258 KTN1Q86UP2 1357 aaKnown RBP17.06■□□□□ 0.32
CHD1L-202ENST00000369258 ADGRL2O95490 1459 aa17.03■□□□□ 0.32
CHD1L-202ENST00000369258 MRC2Q9UBG0 1479 aa17.03■□□□□ 0.32
CHD1L-202ENST00000369258 PDE3BQ13370 1112 aa17.02■□□□□ 0.32
CHD1L-202ENST00000369258 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.02■□□□□ 0.32
CHD1L-202ENST00000369258 TESK2Q96S53 571 aa17.01■□□□□ 0.31
CHD1L-202ENST00000369258 ADGBQ8N7X0 1667 aa17■□□□□ 0.31
CHD1L-202ENST00000369258 MS4A1P11836 297 aa17■□□□□ 0.31
CHD1L-202ENST00000369258 SPINK5Q9NQ38 1064 aaPredicted RBP16.99■□□□□ 0.31
CHD1L-202ENST00000369258 CEP170Q5SW79 1584 aa16.98■□□□□ 0.31
CHD1L-202ENST00000369258 CCDC144AA2RUR9 1427 aa16.98■□□□□ 0.31
CHD1L-202ENST00000369258 ATP10BO94823 1461 aa16.97■□□□□ 0.31
CHD1L-202ENST00000369258 ARHGEF12Q9NZN5 1544 aa16.97■□□□□ 0.31
CHD1L-202ENST00000369258 PARD3Q8TEW0 1356 aa16.97■□□□□ 0.31
CHD1L-202ENST00000369258 ITSN2Q9NZM3 1697 aa16.97■□□□□ 0.31
CHD1L-202ENST00000369258 BRPF3Q9ULD4 1205 aa16.97■□□□□ 0.31
CHD1L-202ENST00000369258 TNNT2P45379 298 aaPredicted RBP16.96■□□□□ 0.31
CHD1L-202ENST00000369258 EIF4G3O43432 1585 aaKnown RBP16.95■□□□□ 0.3
CHD1L-202ENST00000369258 DMRT2Q9Y5R5 561 aa16.95■□□□□ 0.3
CHD1L-202ENST00000369258 PLEKHH1Q9ULM0 1364 aa16.95■□□□□ 0.3
CHD1L-202ENST00000369258 NEUROD2Q15784 382 aa16.95■□□□□ 0.3
CHD1L-202ENST00000369258 BCAR3O75815 825 aa16.95■□□□□ 0.3
CHD1L-202ENST00000369258 MAGI1Q96QZ7 1491 aaPredicted RBP16.94■□□□□ 0.3
CHD1L-202ENST00000369258 PRAG1Q86YV5 1406 aa16.94■□□□□ 0.3
CHD1L-202ENST00000369258 USP35Q9P2H5 1018 aa16.93■□□□□ 0.3
CHD1L-202ENST00000369258 PPM1GO15355 546 aaPredicted RBP16.93■□□□□ 0.3
CHD1L-202ENST00000369258 CDC42BPAQ5VT25 1732 aa16.93■□□□□ 0.3
CHD1L-202ENST00000369258 PLA2R1Q13018 1463 aa16.92■□□□□ 0.3
CHD1L-202ENST00000369258 IFT140Q96RY7 1462 aa16.92■□□□□ 0.3
CHD1L-202ENST00000369258 ERCC6Q03468 1493 aa16.91■□□□□ 0.3
CHD1L-202ENST00000369258 WDR43Q15061 677 aaKnown RBP eCLIP16.91■□□□□ 0.3
CHD1L-202ENST00000369258 CROCC2H7BZ55 1655 aa16.91■□□□□ 0.3
CHD1L-202ENST00000369258 FAM135AQ9P2D6 1515 aa16.9■□□□□ 0.3
CHD1L-202ENST00000369258 A2MP01023 1474 aa16.9■□□□□ 0.3
CHD1L-202ENST00000369258 APAF1O14727 1248 aa16.9■□□□□ 0.3
CHD1L-202ENST00000369258 PPP2R1AP30153 589 aa16.9■□□□□ 0.3
CHD1L-202ENST00000369258 TMF1P82094 1093 aa16.9■□□□□ 0.3
CHD1L-202ENST00000369258 KNSTRNQ9Y448 316 aa16.9■□□□□ 0.3
CHD1L-202ENST00000369258 PLEKHH2Q8IVE3 1493 aa16.9■□□□□ 0.3
CHD1L-202ENST00000369258 DUSP27Q5VZP5 1158 aa16.89■□□□□ 0.29
CHD1L-202ENST00000369258 DDRGK1Q96HY6 314 aa16.89■□□□□ 0.29
CHD1L-202ENST00000369258 ARXQ96QS3 562 aa16.89■□□□□ 0.29
CHD1L-202ENST00000369258 CARMIL2Q6F5E8 1435 aa16.89■□□□□ 0.29
CHD1L-202ENST00000369258 ABCC10Q5T3U5 1492 aa16.88■□□□□ 0.29
CHD1L-202ENST00000369258 RRP7AQ9Y3A4 280 aaKnown RBP16.88■□□□□ 0.29
CHD1L-202ENST00000369258 KDM5DQ9BY66 1539 aa16.88■□□□□ 0.29
CHD1L-202ENST00000369258 NFKBIBQ15653 356 aa16.88■□□□□ 0.29
CHD1L-202ENST00000369258 ERBINQ96RT1 1412 aa16.87■□□□□ 0.29
CHD1L-202ENST00000369258 SHANK2Q9UPX8 1470 aa16.86■□□□□ 0.29
CHD1L-202ENST00000369258 BCL2L13Q9BXK5 485 aa16.86■□□□□ 0.29
CHD1L-202ENST00000369258 ADCY10Q96PN6 1610 aa16.85■□□□□ 0.29
CHD1L-202ENST00000369258 E9PCH4 1651 aa16.85■□□□□ 0.29
CHD1L-202ENST00000369258 FRAT2O75474 233 aaPredicted RBP16.85■□□□□ 0.29
CHD1L-202ENST00000369258 WASHC2CQ9Y4E1 1318 aa16.85■□□□□ 0.29
CHD1L-202ENST00000369258 MAGI2Q86UL8 1455 aa16.85■□□□□ 0.29
CHD1L-202ENST00000369258 TNNQ9UQP3 1299 aa16.85■□□□□ 0.29
CHD1L-202ENST00000369258 AFAP1Q8N556 730 aa16.84■□□□□ 0.29
CHD1L-202ENST00000369258 FRAT1Q92837 279 aaPredicted RBP16.84■□□□□ 0.29
CHD1L-202ENST00000369258 DAXXQ9UER7 740 aaPredicted RBP16.84■□□□□ 0.29
CHD1L-202ENST00000369258 SEC24BO95487 1268 aa16.83■□□□□ 0.29
CHD1L-202ENST00000369258 C8orf34Q49A92 452 aa16.83■□□□□ 0.29
CHD1L-202ENST00000369258 PTPRGP23470 1445 aa16.83■□□□□ 0.29
CHD1L-202ENST00000369258 SYCP2Q9BX26 1530 aa16.83■□□□□ 0.29
CHD1L-202ENST00000369258 IGHDP01880 384 aa16.83■□□□□ 0.28
CHD1L-202ENST00000369258 PANK1Q8TE04 598 aa16.83■□□□□ 0.28
CHD1L-202ENST00000369258 GOLGA2Q08379 1002 aa16.82■□□□□ 0.28
CHD1L-202ENST00000369258 AMER1Q5JTC6 1135 aaPredicted RBP16.82■□□□□ 0.28
CHD1L-202ENST00000369258 SYNJ2O15056 1496 aa16.82■□□□□ 0.28
CHD1L-202ENST00000369258 COL17A1Q9UMD9 1497 aaPredicted RBP16.81■□□□□ 0.28
CHD1L-202ENST00000369258 BLMP54132 1417 aaPredicted RBP16.81■□□□□ 0.28
CHD1L-202ENST00000369258 KDM2BQ8NHM5 1336 aa16.81■□□□□ 0.28
CHD1L-202ENST00000369258 SPRYD3Q8NCJ5 442 aa16.81■□□□□ 0.28
CHD1L-202ENST00000369258 TRPM1Q7Z4N2 1603 aa16.81■□□□□ 0.28
CHD1L-202ENST00000369258 COG6Q9Y2V7 657 aa16.8■□□□□ 0.28
CHD1L-202ENST00000369258 SAMD9LQ8IVG5 1584 aa16.8■□□□□ 0.28
CHD1L-202ENST00000369258 INSRP06213 1382 aa16.79■□□□□ 0.28
CHD1L-202ENST00000369258 CLUAP1Q96AJ1 413 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms