RNA–Protein interactions for RNA: ENST00000369208.7

SIM1-202, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 8,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-202ENST00000369208 ARID3AQ99856 593 aa12.47□□□□□ -0.41
SIM1-202ENST00000369208 FOXD1Q16676 465 aa12.47□□□□□ -0.41
SIM1-202ENST00000369208 BRD2P25440 801 aaKnown RBP12.47□□□□□ -0.41
SIM1-202ENST00000369208 DNAJC2Q99543 621 aaKnown RBP12.46□□□□□ -0.41
SIM1-202ENST00000369208 MRE11P49959 708 aa12.46□□□□□ -0.41
SIM1-202ENST00000369208 STK31Q9BXU1 1019 aa12.46□□□□□ -0.41
SIM1-202ENST00000369208 ZNF330Q9Y3S2 320 aaPredicted RBP12.46□□□□□ -0.41
SIM1-202ENST00000369208 GTF2E1P29083 439 aaPredicted RBP12.46□□□□□ -0.42
SIM1-202ENST00000369208 ANKRD30AQ9BXX3 1397 aa12.46□□□□□ -0.42
SIM1-202ENST00000369208 TAOK2Q9UL54 1235 aa12.45□□□□□ -0.42
SIM1-202ENST00000369208 STK26Q9P289 416 aa12.45□□□□□ -0.42
SIM1-202ENST00000369208 LMOD3Q0VAK6 560 aa12.45□□□□□ -0.42
SIM1-202ENST00000369208 ARGLU1Q9NWB6 273 aaPredicted RBP12.44□□□□□ -0.42
SIM1-202ENST00000369208 PES1O00541 588 aaKnown RBP12.44□□□□□ -0.42
SIM1-202ENST00000369208 MEX3CQ5U5Q3 659 aaKnown RBP12.44□□□□□ -0.42
SIM1-202ENST00000369208 PLCB2Q00722 1185 aa12.44□□□□□ -0.42
SIM1-202ENST00000369208 PDCL2Q8N4E4 241 aa12.44□□□□□ -0.42
SIM1-202ENST00000369208 NGDNQ8NEJ9 315 aaKnown RBP12.44□□□□□ -0.42
SIM1-202ENST00000369208 BBXQ8WY36 941 aaPredicted RBP12.43□□□□□ -0.42
SIM1-202ENST00000369208 CALCOCO1Q9P1Z2 691 aa12.43□□□□□ -0.42
SIM1-202ENST00000369208 KIF3AQ9Y496 699 aa12.43□□□□□ -0.42
SIM1-202ENST00000369208 ACBD3Q9H3P7 528 aa12.42□□□□□ -0.42
SIM1-202ENST00000369208 SAFB2Q14151 953 aaKnown RBP eCLIP12.42□□□□□ -0.42
SIM1-202ENST00000369208 UACAQ9BZF9 1416 aa12.42□□□□□ -0.42
SIM1-202ENST00000369208 KTN1Q86UP2 1357 aaKnown RBP12.42□□□□□ -0.42
SIM1-202ENST00000369208 SOGA1O94964 1423 aa12.42□□□□□ -0.42
SIM1-202ENST00000369208 WASHC2CQ9Y4E1 1318 aa12.42□□□□□ -0.42
SIM1-202ENST00000369208 CLGNO14967 610 aa12.42□□□□□ -0.42
SIM1-202ENST00000369208 WASHC2AQ641Q2 1341 aa12.41□□□□□ -0.42
SIM1-202ENST00000369208 TPM4P67936 248 aa12.41□□□□□ -0.42
SIM1-202ENST00000369208 TPM3P06753 285 aa12.41□□□□□ -0.42
SIM1-202ENST00000369208 CTR9Q6PD62 1173 aa12.4□□□□□ -0.42
SIM1-202ENST00000369208 KRI1Q8N9T8 703 aaKnown RBP12.4□□□□□ -0.42
SIM1-202ENST00000369208 CHMP4CQ96CF2 233 aa12.4□□□□□ -0.43
SIM1-202ENST00000369208 HIRIP3Q9BW71 556 aaPredicted RBP12.4□□□□□ -0.43
SIM1-202ENST00000369208 CCDC18Q5T9S5 1454 aa12.39□□□□□ -0.43
SIM1-202ENST00000369208 HMMRO75330 724 aa12.39□□□□□ -0.43
SIM1-202ENST00000369208 KIF16BQ96L93 1317 aa12.39□□□□□ -0.43
SIM1-202ENST00000369208 CECR2Q9BXF3 1484 aa12.39□□□□□ -0.43
SIM1-202ENST00000369208 EVA1CP58658 441 aa12.39□□□□□ -0.43
SIM1-202ENST00000369208 GZF1Q9H116 711 aaPredicted RBP12.39□□□□□ -0.43
SIM1-202ENST00000369208 LETM1O95202 739 aaPredicted RBP12.39□□□□□ -0.43
SIM1-202ENST00000369208 AMPHP49418 695 aa12.38□□□□□ -0.43
SIM1-202ENST00000369208 CCDC39Q9UFE4 941 aa12.38□□□□□ -0.43
SIM1-202ENST00000369208 FRAT2O75474 233 aaPredicted RBP12.38□□□□□ -0.43
SIM1-202ENST00000369208 CHMP3Q9Y3E7 222 aa12.38□□□□□ -0.43
SIM1-202ENST00000369208 CAVIN1Q6NZI2 390 aaKnown RBP12.38□□□□□ -0.43
SIM1-202ENST00000369208 AK7Q96M32 723 aa12.38□□□□□ -0.43
SIM1-202ENST00000369208 ROCK2O75116 1388 aaKnown RBP12.38□□□□□ -0.43
SIM1-202ENST00000369208 PRM3Q9NNZ6 103 aa12.37□□□□□ -0.43
SIM1-202ENST00000369208 IL27Q8NEV9 243 aa12.37□□□□□ -0.43
SIM1-202ENST00000369208 MYO15BQ96JP2 1530 aa12.37□□□□□ -0.43
SIM1-202ENST00000369208 ABCC8Q09428 1581 aa12.37□□□□□ -0.43
SIM1-202ENST00000369208 TPRNQ4KMQ1 711 aa12.37□□□□□ -0.43
SIM1-202ENST00000369208 KIF3BO15066 747 aa12.36□□□□□ -0.43
SIM1-202ENST00000369208 CCDC173Q0VFZ6 552 aa12.36□□□□□ -0.43
SIM1-202ENST00000369208 AMOTL1Q8IY63 956 aa12.36□□□□□ -0.43
SIM1-202ENST00000369208 LRRFIP1Q32MZ4 808 aaKnown RBP12.36□□□□□ -0.43
SIM1-202ENST00000369208 RBM28Q9NW13 759 aaKnown RBP12.36□□□□□ -0.43
SIM1-202ENST00000369208 NOL10Q9BSC4 688 aaKnown RBP12.36□□□□□ -0.43
SIM1-202ENST00000369208 NOC3LQ8WTT2 800 aaKnown RBP12.35□□□□□ -0.43
SIM1-202ENST00000369208 LEKR1Q6ZMV7 388 aa12.35□□□□□ -0.43
SIM1-202ENST00000369208 TRIM34Q9BYJ4 488 aa12.35□□□□□ -0.43
SIM1-202ENST00000369208 NUP155O75694 1391 aa12.34□□□□□ -0.43
SIM1-202ENST00000369208 U2AF1L5P0DN76 240 aaPredicted RBP12.34□□□□□ -0.43
SIM1-202ENST00000369208 U2AF1Q01081 240 aaKnown RBP eCLIP12.34□□□□□ -0.43
SIM1-202ENST00000369208 OSCARQ8IYS5 282 aa12.34□□□□□ -0.43
SIM1-202ENST00000369208 PKD2Q13563 968 aa12.34□□□□□ -0.43
SIM1-202ENST00000369208 RGS3P49796 1198 aa12.34□□□□□ -0.43
SIM1-202ENST00000369208 CCDC70Q6NSX1 233 aa12.34□□□□□ -0.43
SIM1-202ENST00000369208 CCDC191Q8NCU4 936 aa12.33□□□□□ -0.44
SIM1-202ENST00000369208 CTDP1Q9Y5B0 961 aaPredicted RBP12.33□□□□□ -0.44
SIM1-202ENST00000369208 RBM10P98175 930 aaKnown RBP12.33□□□□□ -0.44
SIM1-202ENST00000369208 RALBP1Q15311 655 aa12.33□□□□□ -0.44
SIM1-202ENST00000369208 C1orf141Q5JVX7 400 aa12.33□□□□□ -0.44
SIM1-202ENST00000369208 MNS1Q8NEH6 495 aa12.33□□□□□ -0.44
SIM1-202ENST00000369208 CEP89Q96ST8 783 aa12.32□□□□□ -0.44
SIM1-202ENST00000369208 GTPBP4Q9BZE4 634 aaKnown RBP12.32□□□□□ -0.44
SIM1-202ENST00000369208 FAM107BQ9H098 131 aa12.32□□□□□ -0.44
SIM1-202ENST00000369208 MSH5O43196 834 aa12.32□□□□□ -0.44
SIM1-202ENST00000369208 TCEAL9Q9UHQ7 104 aa12.32□□□□□ -0.44
SIM1-202ENST00000369208 HMGB2P26583 209 aaKnown RBP12.31□□□□□ -0.44
SIM1-202ENST00000369208 RASSF8Q8NHQ8 419 aa12.31□□□□□ -0.44
SIM1-202ENST00000369208 MARCH6O60337 910 aa12.31□□□□□ -0.44
SIM1-202ENST00000369208 SETD5Q9C0A6 1442 aa12.31□□□□□ -0.44
SIM1-202ENST00000369208 RWDD1Q9H446 243 aaPredicted RBP12.31□□□□□ -0.44
SIM1-202ENST00000369208 BCCIPQ9P287 314 aaKnown RBP eCLIP12.3□□□□□ -0.44
SIM1-202ENST00000369208 NFKBIBQ15653 356 aa12.3□□□□□ -0.44
SIM1-202ENST00000369208 FAM161AQ3B820 660 aa12.3□□□□□ -0.44
SIM1-202ENST00000369208 DHX8Q14562 1220 aaKnown RBP12.29□□□□□ -0.44
SIM1-202ENST00000369208 HSP90B2PQ58FF3 399 aa12.29□□□□□ -0.44
SIM1-202ENST00000369208 PAIP2Q9BPZ3 127 aaKnown RBP12.29□□□□□ -0.44
SIM1-202ENST00000369208 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.29□□□□□ -0.44
SIM1-202ENST00000369208 CWC22Q9HCG8 908 aaKnown RBP12.29□□□□□ -0.44
SIM1-202ENST00000369208 VPS53Q5VIR6 699 aa12.28□□□□□ -0.44
SIM1-202ENST00000369208 SLKQ9H2G2 1235 aaPredicted RBP12.28□□□□□ -0.44
SIM1-202ENST00000369208 VGFO15240 615 aaPredicted RBP12.28□□□□□ -0.44
SIM1-202ENST00000369208 DCTN1Q14203 1278 aa12.28□□□□□ -0.44
SIM1-202ENST00000369208 TTC5Q8N0Z6 440 aa12.28□□□□□ -0.44
SIM1-202ENST00000369208 TIGD1Q96MW7 591 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms